RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 PPP1R12BO60237 982 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-210ENST00000553779 CSF1RP07333 972 aa12.53□□□□□ -0.4
ACTN1-210ENST00000553779 RGS19P49795 217 aa12.53□□□□□ -0.4
ACTN1-210ENST00000553779 LMBR1LQ6UX01 489 aa12.53□□□□□ -0.4
ACTN1-210ENST00000553779 LDHAL6AQ6ZMR3 332 aa12.53□□□□□ -0.4
ACTN1-210ENST00000553779 FAM9BQ8IZU0 186 aa12.53□□□□□ -0.4
ACTN1-210ENST00000553779 JAG2Q9Y219 1238 aa12.53□□□□□ -0.4
ACTN1-210ENST00000553779 LAMB1P07942 1786 aa12.53□□□□□ -0.4
ACTN1-210ENST00000553779 GRM8O00222 908 aa12.52□□□□□ -0.41
ACTN1-210ENST00000553779 CASP7P55210 303 aa12.52□□□□□ -0.41
ACTN1-210ENST00000553779 VPS37DQ86XT2 251 aa12.52□□□□□ -0.41
ACTN1-210ENST00000553779 DEFB129Q9H1M3 183 aa12.52□□□□□ -0.41
ACTN1-210ENST00000553779 CLRN2A0PK11 232 aa12.51□□□□□ -0.41
ACTN1-210ENST00000553779 SNAP23O00161 211 aa12.51□□□□□ -0.41
ACTN1-210ENST00000553779 VAMP4O75379 141 aa12.51□□□□□ -0.41
ACTN1-210ENST00000553779 FRAT2O75474 233 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-210ENST00000553779 IREB2P48200 963 aaKnown RBP12.51□□□□□ -0.41
ACTN1-210ENST00000553779 PTPN12Q05209 780 aaKnown RBP12.51□□□□□ -0.41
ACTN1-210ENST00000553779 PKN2Q16513 984 aaKnown RBP12.51□□□□□ -0.41
ACTN1-210ENST00000553779 CFAP100Q494V2 611 aa12.51□□□□□ -0.41
ACTN1-210ENST00000553779 NCBP3Q53F19 620 aaKnown RBP12.51□□□□□ -0.41
ACTN1-210ENST00000553779 ZNF296Q8WUU4 475 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-210ENST00000553779 SLC10A4Q96EP9 437 aa12.51□□□□□ -0.41
ACTN1-210ENST00000553779 SRCIN1Q9C0H9 1055 aa12.51□□□□□ -0.41
ACTN1-210ENST00000553779 PPP2R3BQ9Y5P8 575 aa12.51□□□□□ -0.41
ACTN1-210ENST00000553779 ALDH1A1P00352 501 aa12.5□□□□□ -0.41
ACTN1-210ENST00000553779 ZEB1P37275 1124 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-210ENST00000553779 TNFAIP1Q13829 316 aa12.5□□□□□ -0.41
ACTN1-210ENST00000553779 SUPT20HL1Q3ZLR7 823 aa12.5□□□□□ -0.41
ACTN1-210ENST00000553779 BEND3Q5T5X7 828 aa12.5□□□□□ -0.41
ACTN1-210ENST00000553779 ZNF594Q96JF6 807 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-210ENST00000553779 HPS5Q9UPZ3 1129 aa12.5□□□□□ -0.41
ACTN1-210ENST00000553779 MANSC4A6NHS7 340 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-210ENST00000553779 GPR25O00155 361 aa12.49□□□□□ -0.41
ACTN1-210ENST00000553779 FKTNO75072 461 aa12.49□□□□□ -0.41
ACTN1-210ENST00000553779 ALDH1L1O75891 902 aa12.49□□□□□ -0.41
ACTN1-210ENST00000553779 FOXO4P98177 505 aa12.49□□□□□ -0.41
ACTN1-210ENST00000553779 SPRYD7Q5W111 196 aa12.49□□□□□ -0.41
ACTN1-210ENST00000553779 OTUD7BQ6GQQ9 843 aa12.49□□□□□ -0.41
ACTN1-210ENST00000553779 FZD1Q9UP38 647 aa12.49□□□□□ -0.41
ACTN1-210ENST00000553779 SPDYE2BA6NHP3 402 aa12.48□□□□□ -0.41
ACTN1-210ENST00000553779 SPDYE6P0CI01 402 aa12.48□□□□□ -0.41
ACTN1-210ENST00000553779 IL1R1P14778 569 aa12.48□□□□□ -0.41
ACTN1-210ENST00000553779 TM4SF4P48230 202 aa12.48□□□□□ -0.41
ACTN1-210ENST00000553779 MFSD14BQ5SR56 506 aa12.48□□□□□ -0.41
ACTN1-210ENST00000553779 C15orf52Q6ZUT6 534 aaKnown RBP12.48□□□□□ -0.41
ACTN1-210ENST00000553779 CERS5Q8N5B7 392 aa12.48□□□□□ -0.41
ACTN1-210ENST00000553779 TTF2Q9UNY4 1162 aaKnown RBP12.48□□□□□ -0.41
ACTN1-210ENST00000553779 ZNF316A6NFI3 1004 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-210ENST00000553779 ZBTB48P10074 688 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-210ENST00000553779 HIBADHP31937 336 aaKnown RBP12.47□□□□□ -0.41
ACTN1-210ENST00000553779 GYG1P46976 350 aa12.47□□□□□ -0.41
ACTN1-210ENST00000553779 TNNI2P48788 182 aa12.47□□□□□ -0.41
ACTN1-210ENST00000553779 FKBP1AP62942 108 aaKnown RBP12.47□□□□□ -0.41
ACTN1-210ENST00000553779 CHAF1AQ13111 956 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-210ENST00000553779 MTMR14Q8NCE2 650 aa12.47□□□□□ -0.41
ACTN1-210ENST00000553779 ZBED3Q96IU2 234 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-210ENST00000553779 WNK4Q96J92 1243 aa12.47□□□□□ -0.41
ACTN1-210ENST00000553779 PCDHAC2Q9Y5I4 1007 aa12.47□□□□□ -0.41
ACTN1-210ENST00000553779 MROH5Q6ZUA9 1318 aa12.46□□□□□ -0.41
ACTN1-210ENST00000553779 INHBEP58166 350 aa12.46□□□□□ -0.41
ACTN1-210ENST00000553779 UBE4AQ14139 1066 aa12.46□□□□□ -0.41
ACTN1-210ENST00000553779 CAVIN4Q5BKX8 364 aa12.46□□□□□ -0.41
ACTN1-210ENST00000553779 METTL24Q5JXM2 366 aa12.46□□□□□ -0.41
ACTN1-210ENST00000553779 EPHA10Q5JZY3 1008 aa12.46□□□□□ -0.41
ACTN1-210ENST00000553779 LDLRAD1Q5T700 205 aa12.46□□□□□ -0.41
ACTN1-210ENST00000553779 FBXO46Q6PJ61 603 aaPredicted RBP12.46□□□□□ -0.41
ACTN1-210ENST00000553779 CLMNQ96JQ2 1002 aa12.46□□□□□ -0.41
ACTN1-210ENST00000553779 TMOD2Q9NZR1 351 aa12.46□□□□□ -0.41
ACTN1-210ENST00000553779 SSC5DA1L4H1 1573 aa12.46□□□□□ -0.42
ACTN1-210ENST00000553779 CEP290O15078 2479 aa12.45□□□□□ -0.42
ACTN1-210ENST00000553779 RASA3Q14644 834 aa12.45□□□□□ -0.42
ACTN1-210ENST00000553779 NBPF12Q5TAG4 269 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-210ENST00000553779 IFNL1Q8IU54 200 aa12.45□□□□□ -0.42
ACTN1-210ENST00000553779 ANKRD13AQ8IZ07 590 aa12.45□□□□□ -0.42
ACTN1-210ENST00000553779 SUCLG2Q96I99 432 aa12.45□□□□□ -0.42
ACTN1-210ENST00000553779 PRMT6Q96LA8 375 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-210ENST00000553779 ELP3Q9H9T3 547 aa12.45□□□□□ -0.42
ACTN1-210ENST00000553779 IQSEC3Q9UPP2 1182 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-210ENST00000553779 TRIM17Q9Y577 477 aa12.45□□□□□ -0.42
ACTN1-210ENST00000553779 CSADQ9Y600 493 aa12.45□□□□□ -0.42
ACTN1-210ENST00000553779 RBBP6Q7Z6E9 1792 aaKnown RBP12.45□□□□□ -0.42
ACTN1-210ENST00000553779 IRS2Q9Y4H2 1338 aa12.44□□□□□ -0.42
ACTN1-210ENST00000553779 TCP10L2B9ZVM9 353 aa12.44□□□□□ -0.42
ACTN1-210ENST00000553779 WDHD1O75717 1129 aaPredicted RBP12.44□□□□□ -0.42
ACTN1-210ENST00000553779 SLC34A2O95436 690 aa12.44□□□□□ -0.42
ACTN1-210ENST00000553779 NOM1Q5C9Z4 860 aaKnown RBP12.44□□□□□ -0.42
ACTN1-210ENST00000553779 ERO1AQ96HE7 468 aa12.44□□□□□ -0.42
ACTN1-210ENST00000553779 TDRD3Q9H7E2 651 aaKnown RBP12.44□□□□□ -0.42
ACTN1-210ENST00000553779 SPINK5Q9NQ38 1064 aaPredicted RBP12.44□□□□□ -0.42
ACTN1-210ENST00000553779 ZNF70Q9UC06 446 aaPredicted RBP12.44□□□□□ -0.42
ACTN1-210ENST00000553779 SERPINA10Q9UK55 444 aa12.44□□□□□ -0.42
ACTN1-210ENST00000553779 CENPFP49454 3210 aa12.44□□□□□ -0.42
ACTN1-210ENST00000553779 FAM205AQ6ZU69 1335 aa12.43□□□□□ -0.42
ACTN1-210ENST00000553779 MYH2Q9UKX2 1941 aa12.43□□□□□ -0.42
ACTN1-210ENST00000553779 UNCXA6NJT0 531 aa12.43□□□□□ -0.42
ACTN1-210ENST00000553779 CRKP46108 304 aa12.43□□□□□ -0.42
ACTN1-210ENST00000553779 MAP3K11Q16584 847 aa12.43□□□□□ -0.42
ACTN1-210ENST00000553779 SPDYE2Q495Y8 402 aa12.43□□□□□ -0.42
ACTN1-210ENST00000553779 TBC1D22AQ8WUA7 517 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms