RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 CELF2O95319 508 aaKnown RBP12.71□□□□□ -0.38
HNRNPC-208ENST00000553753 IFIT1P09914 478 aaKnown RBP12.71□□□□□ -0.38
HNRNPC-208ENST00000553753 RLBP1P12271 317 aa12.71□□□□□ -0.38
HNRNPC-208ENST00000553753 IL15P40933 162 aaPredicted RBP12.71□□□□□ -0.38
HNRNPC-208ENST00000553753 FKBP1AP62942 108 aaKnown RBP12.71□□□□□ -0.38
HNRNPC-208ENST00000553753 ANGEL2Q5VTE6 544 aaKnown RBP12.71□□□□□ -0.38
HNRNPC-208ENST00000553753 ITPRIPQ8IWB1 547 aa12.71□□□□□ -0.38
HNRNPC-208ENST00000553753 SULF1Q8IWU6 871 aa12.71□□□□□ -0.38
HNRNPC-208ENST00000553753 CEP126Q9P2H0 1117 aa12.71□□□□□ -0.38
HNRNPC-208ENST00000553753 JAG2Q9Y219 1238 aa12.71□□□□□ -0.38
HNRNPC-208ENST00000553753 FAM205AQ6ZU69 1335 aa12.7□□□□□ -0.38
HNRNPC-208ENST00000553753 RASSF10A6NK89 507 aa12.7□□□□□ -0.38
HNRNPC-208ENST00000553753 WNT10BO00744 389 aa12.7□□□□□ -0.38
HNRNPC-208ENST00000553753 DEFB115Q30KQ5 88 aa12.7□□□□□ -0.38
HNRNPC-208ENST00000553753 NBPF9Q3BBW0 867 aa12.7□□□□□ -0.38
HNRNPC-208ENST00000553753 LPIN2Q92539 896 aa12.7□□□□□ -0.38
HNRNPC-208ENST00000553753 TRPM7Q96QT4 1865 aa12.7□□□□□ -0.38
HNRNPC-208ENST00000553753 ZNF408Q9H9D4 720 aa12.7□□□□□ -0.38
HNRNPC-208ENST00000553753 ADM5C9JUS6 153 aa12.69□□□□□ -0.38
HNRNPC-208ENST00000553753 ZBTB7BO15156 539 aaPredicted RBP12.69□□□□□ -0.38
HNRNPC-208ENST00000553753 FRAT2O75474 233 aaPredicted RBP12.69□□□□□ -0.38
HNRNPC-208ENST00000553753 SLC5A1P13866 664 aa12.69□□□□□ -0.38
HNRNPC-208ENST00000553753 BCAMP50895 628 aa12.69□□□□□ -0.38
HNRNPC-208ENST00000553753 MFSD14BQ5SR56 506 aa12.69□□□□□ -0.38
HNRNPC-208ENST00000553753 DLK2Q6UY11 383 aa12.69□□□□□ -0.38
HNRNPC-208ENST00000553753 PITPNM2Q9BZ72 1349 aa12.69□□□□□ -0.38
HNRNPC-208ENST00000553753 F8W031 263 aaPredicted RBP12.69□□□□□ -0.38
HNRNPC-208ENST00000553753 SAPCD2Q86UD0 394 aa12.69□□□□□ -0.38
HNRNPC-208ENST00000553753 RCAN3Q9UKA8 241 aa12.69□□□□□ -0.38
HNRNPC-208ENST00000553753 IQSEC3Q9UPP2 1182 aaPredicted RBP12.69□□□□□ -0.38
HNRNPC-208ENST00000553753 TLL2Q9Y6L7 1015 aa12.69□□□□□ -0.38
HNRNPC-208ENST00000553753 PNMA6EA0A0J9YXQ4 647 aa12.68□□□□□ -0.38
HNRNPC-208ENST00000553753 MS4A1P11836 297 aa12.68□□□□□ -0.38
HNRNPC-208ENST00000553753 VEGFBP49765 207 aa12.68□□□□□ -0.38
HNRNPC-208ENST00000553753 ATP2B3Q16720 1220 aa12.68□□□□□ -0.38
HNRNPC-208ENST00000553753 DLGAP5Q15398 846 aa12.67□□□□□ -0.38
HNRNPC-208ENST00000553753 MTMR14Q8NCE2 650 aa12.67□□□□□ -0.38
HNRNPC-208ENST00000553753 PANK1Q8TE04 598 aa12.67□□□□□ -0.38
HNRNPC-208ENST00000553753 TBC1D22AQ8WUA7 517 aa12.66□□□□□ -0.38
HNRNPC-208ENST00000553753 ZBED3Q96IU2 234 aaPredicted RBP12.66□□□□□ -0.38
HNRNPC-208ENST00000553753 SCAF8Q9UPN6 1271 aaKnown RBP12.66□□□□□ -0.38
HNRNPC-208ENST00000553753 ATP8B2P98198 1209 aa12.66□□□□□ -0.38
HNRNPC-208ENST00000553753 CHAF1AQ13111 956 aaPredicted RBP12.66□□□□□ -0.38
HNRNPC-208ENST00000553753 CFAP100Q494V2 611 aa12.66□□□□□ -0.38
HNRNPC-208ENST00000553753 CDCA5Q96FF9 252 aa12.66□□□□□ -0.38
HNRNPC-208ENST00000553753 C1orf115Q9H7X2 142 aa12.66□□□□□ -0.38
HNRNPC-208ENST00000553753 TTF2Q9UNY4 1162 aaKnown RBP12.66□□□□□ -0.38
HNRNPC-208ENST00000553753 ECE1P42892 770 aa12.65□□□□□ -0.38
HNRNPC-208ENST00000553753 RBM5P52756 815 aaKnown RBP eCLIP12.65□□□□□ -0.385e-14■■□□□ 12.8
HNRNPC-208ENST00000553753 TIMM10P62072 90 aa12.65□□□□□ -0.38
HNRNPC-208ENST00000553753 TFCP2Q12800 502 aa12.65□□□□□ -0.38
HNRNPC-208ENST00000553753 G3BP1Q13283 466 aaKnown RBP eCLIP12.65□□□□□ -0.384e-10■□□□□ 8.8
HNRNPC-208ENST00000553753 PAXIP1Q6ZW49 1069 aaPredicted RBP12.65□□□□□ -0.38
HNRNPC-208ENST00000553753 C2orf69Q8N8R5 385 aa12.65□□□□□ -0.38
HNRNPC-208ENST00000553753 HHIPL1Q96JK4 782 aa12.65□□□□□ -0.38
HNRNPC-208ENST00000553753 PRMT6Q96LA8 375 aaPredicted RBP12.65□□□□□ -0.38
HNRNPC-208ENST00000553753 GBA2Q9HCG7 927 aaPredicted RBP12.65□□□□□ -0.38
HNRNPC-208ENST00000553753 SERPINA10Q9UK55 444 aa12.65□□□□□ -0.38
HNRNPC-208ENST00000553753 AKAP2Q9Y2D5 859 aa12.65□□□□□ -0.38
HNRNPC-208ENST00000553753 WDR33Q9C0J8 1336 aaKnown RBP12.65□□□□□ -0.38
HNRNPC-208ENST00000553753 SPDYE2BA6NHP3 402 aa12.64□□□□□ -0.39
HNRNPC-208ENST00000553753 MYO1BO43795 1136 aa12.64□□□□□ -0.39
HNRNPC-208ENST00000553753 SPDYE6P0CI01 402 aa12.64□□□□□ -0.39
HNRNPC-208ENST00000553753 POLA2Q14181 598 aa12.64□□□□□ -0.39
HNRNPC-208ENST00000553753 CYP4F22Q6NT55 531 aa12.64□□□□□ -0.39
HNRNPC-208ENST00000553753 APOBEC3FQ8IUX4 373 aaKnown RBP12.64□□□□□ -0.39
HNRNPC-208ENST00000553753 SSH3Q8TE77 659 aa12.64□□□□□ -0.39
HNRNPC-208ENST00000553753 CAPNS2Q96L46 248 aa12.64□□□□□ -0.39
HNRNPC-208ENST00000553753 GNL3LQ9NVN8 582 aaKnown RBP12.64□□□□□ -0.39
HNRNPC-208ENST00000553753 PCDHAC2Q9Y5I4 1007 aa12.64□□□□□ -0.39
HNRNPC-208ENST00000553753 A0A1B0GUL7 405 aa12.64□□□□□ -0.39
HNRNPC-208ENST00000553753 HUNKP57058 714 aa12.64□□□□□ -0.39
HNRNPC-208ENST00000553753 GRM1Q13255 1194 aa12.64□□□□□ -0.39
HNRNPC-208ENST00000553753 GRIK5Q16478 980 aa12.64□□□□□ -0.39
HNRNPC-208ENST00000553753 PHKA1P46020 1223 aa12.63□□□□□ -0.39
HNRNPC-208ENST00000553753 MVPQ14764 893 aaKnown RBP12.63□□□□□ -0.39
HNRNPC-208ENST00000553753 PRAMEF18Q5VWM3 479 aa12.63□□□□□ -0.39
HNRNPC-208ENST00000553753 CCDC102BQ68D86 513 aa12.63□□□□□ -0.39
HNRNPC-208ENST00000553753 WDR66Q8TBY9 1149 aa12.63□□□□□ -0.39
HNRNPC-208ENST00000553753 COG6Q9Y2V7 657 aa12.63□□□□□ -0.39
HNRNPC-208ENST00000553753 SUGT1Q9Y2Z0 365 aa12.63□□□□□ -0.39
HNRNPC-208ENST00000553753 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.63□□□□□ -0.39
HNRNPC-208ENST00000553753 SEMA3EO15041 775 aa12.62□□□□□ -0.39
HNRNPC-208ENST00000553753 HSPA1AP0DMV8 641 aaKnown RBP12.62□□□□□ -0.39
HNRNPC-208ENST00000553753 HSPA1BP0DMV9 641 aaKnown RBP12.62□□□□□ -0.39
HNRNPC-208ENST00000553753 ADORA1P30542 326 aa12.62□□□□□ -0.39
HNRNPC-208ENST00000553753 HDLBPQ00341 1268 aaKnown RBP12.62□□□□□ -0.39
HNRNPC-208ENST00000553753 XAGE2Q96GT9 111 aa12.62□□□□□ -0.39
HNRNPC-208ENST00000553753 NEUROD6Q96NK8 337 aa12.62□□□□□ -0.39
HNRNPC-208ENST00000553753 DEFB129Q9H1M3 183 aa12.62□□□□□ -0.39
HNRNPC-208ENST00000553753 DDX19BQ9UMR2 479 aa12.62□□□□□ -0.39
HNRNPC-208ENST00000553753 CLRN2A0PK11 232 aa12.61□□□□□ -0.39
HNRNPC-208ENST00000553753 SURF6O75683 361 aaKnown RBP12.61□□□□□ -0.39
HNRNPC-208ENST00000553753 CRKP46108 304 aa12.61□□□□□ -0.39
HNRNPC-208ENST00000553753 FKBP1BP68106 108 aa12.61□□□□□ -0.39
HNRNPC-208ENST00000553753 CEP85Q6P2H3 762 aa12.61□□□□□ -0.39
HNRNPC-208ENST00000553753 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.61□□□□□ -0.39
HNRNPC-208ENST00000553753 MRIQ9BWK5 157 aa12.61□□□□□ -0.39
HNRNPC-208ENST00000553753 DENND2AQ9ULE3 1009 aa12.61□□□□□ -0.39
HNRNPC-208ENST00000553753 ARAP2Q8WZ64 1704 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms