RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 SLC34A2O95436 690 aa20.03■□□□□ 0.8
ACTN1-209ENST00000553659 KLRK1P26718 216 aa20.03■□□□□ 0.8
ACTN1-209ENST00000553659 ZKSCAN2Q63HK3 967 aa20.03■□□□□ 0.8
ACTN1-209ENST00000553659 CENPQQ7L2Z9 268 aaPredicted RBP20.03■□□□□ 0.8
ACTN1-209ENST00000553659 IPO8O15397 1037 aaKnown RBP20.02■□□□□ 0.8
ACTN1-209ENST00000553659 SASH1O94885 1247 aa20.02■□□□□ 0.8
ACTN1-209ENST00000553659 TM4SF4P48230 202 aa20.02■□□□□ 0.8
ACTN1-209ENST00000553659 GTF2IP78347 998 aa20.02■□□□□ 0.8
ACTN1-209ENST00000553659 CHRNDQ07001 517 aa20.02■□□□□ 0.8
ACTN1-209ENST00000553659 KIAA0825Q8IV33 1275 aa20.02■□□□□ 0.8
ACTN1-209ENST00000553659 ECM29Q5VYK3 1845 aa20.02■□□□□ 0.79
ACTN1-209ENST00000553659 A0A1B0GUL6 1792 aa20.01■□□□□ 0.79
ACTN1-209ENST00000553659 ANKRD18BA2A2Z9 1011 aa20.01■□□□□ 0.79
ACTN1-209ENST00000553659 KCNJ4P48050 445 aa20.01■□□□□ 0.79
ACTN1-209ENST00000553659 APOBEC3FQ8IUX4 373 aaKnown RBP20.01■□□□□ 0.79
ACTN1-209ENST00000553659 ZBED3Q96IU2 234 aaPredicted RBP20.01■□□□□ 0.79
ACTN1-209ENST00000553659 CD209Q9NNX6 404 aa20.01■□□□□ 0.79
ACTN1-209ENST00000553659 VAMP4O75379 141 aa20■□□□□ 0.79
ACTN1-209ENST00000553659 TBC1D8O95759 1140 aa20■□□□□ 0.79
ACTN1-209ENST00000553659 ARMC9Q7Z3E5 817 aa20■□□□□ 0.79
ACTN1-209ENST00000553659 SMC4Q9NTJ3 1288 aa20■□□□□ 0.79
ACTN1-209ENST00000553659 PTPN12Q05209 780 aaKnown RBP19.99■□□□□ 0.79
ACTN1-209ENST00000553659 PKN2Q16513 984 aaKnown RBP19.99■□□□□ 0.79
ACTN1-209ENST00000553659 C15orf52Q6ZUT6 534 aaKnown RBP19.99■□□□□ 0.79
ACTN1-209ENST00000553659 FRAT1Q92837 279 aaPredicted RBP19.99■□□□□ 0.79
ACTN1-209ENST00000553659 SOX10P56693 466 aa19.98■□□□□ 0.79
ACTN1-209ENST00000553659 NOM1Q5C9Z4 860 aaKnown RBP19.98■□□□□ 0.79
ACTN1-209ENST00000553659 ZNF296Q8WUU4 475 aaPredicted RBP19.98■□□□□ 0.79
ACTN1-209ENST00000553659 IRS2Q9Y4H2 1338 aa19.98■□□□□ 0.79
ACTN1-209ENST00000553659 TAF5LO75529 589 aa19.97■□□□□ 0.79
ACTN1-209ENST00000553659 FOXO4P98177 505 aa19.97■□□□□ 0.79
ACTN1-209ENST00000553659 SREBF2Q12772 1141 aa19.97■□□□□ 0.79
ACTN1-209ENST00000553659 MKRN3Q13064 507 aaKnown RBP19.97■□□□□ 0.79
ACTN1-209ENST00000553659 IFIT5Q13325 482 aaKnown RBP19.97■□□□□ 0.79
ACTN1-209ENST00000553659 PRKG1Q13976 671 aa19.97■□□□□ 0.79
ACTN1-209ENST00000553659 DLGAP5Q15398 846 aa19.97■□□□□ 0.79
ACTN1-209ENST00000553659 LDLRAD1Q5T700 205 aa19.97■□□□□ 0.79
ACTN1-209ENST00000553659 SNAP23O00161 211 aa19.96■□□□□ 0.79
ACTN1-209ENST00000553659 FTSJ3Q8IY81 847 aaKnown RBP19.96■□□□□ 0.79
ACTN1-209ENST00000553659 DZIP1LQ8IYY4 767 aaKnown RBP19.96■□□□□ 0.79
ACTN1-209ENST00000553659 MTMR14Q8NCE2 650 aa19.96■□□□□ 0.79
ACTN1-209ENST00000553659 HELBQ8NG08 1087 aaPredicted RBP19.96■□□□□ 0.79
ACTN1-209ENST00000553659 CLUAP1Q96AJ1 413 aa19.96■□□□□ 0.79
ACTN1-209ENST00000553659 CHMP4BQ9H444 224 aaKnown RBP19.96■□□□□ 0.79
ACTN1-209ENST00000553659 ANGEL1Q9UNK9 670 aaKnown RBP19.96■□□□□ 0.79
ACTN1-209ENST00000553659 HPS5Q9UPZ3 1129 aa19.96■□□□□ 0.79
ACTN1-209ENST00000553659 COL1A1P02452 1464 aaPredicted RBP19.96■□□□□ 0.79
ACTN1-209ENST00000553659 PDE4DIPQ5VU43 2346 aa19.95■□□□□ 0.78
ACTN1-209ENST00000553659 GPR25O00155 361 aa19.95■□□□□ 0.78
ACTN1-209ENST00000553659 IL1R1P14778 569 aa19.95■□□□□ 0.78
ACTN1-209ENST00000553659 BEND3Q5T5X7 828 aa19.95■□□□□ 0.78
ACTN1-209ENST00000553659 CERS5Q8N5B7 392 aa19.95■□□□□ 0.78
ACTN1-209ENST00000553659 SSH1Q8WYL5 1049 aa19.95■□□□□ 0.78
ACTN1-209ENST00000553659 CFHR5Q9BXR6 569 aa19.95■□□□□ 0.78
ACTN1-209ENST00000553659 DEFB129Q9H1M3 183 aa19.95■□□□□ 0.78
ACTN1-209ENST00000553659 F6X3S4 739 aa19.94■□□□□ 0.78
ACTN1-209ENST00000553659 FKBP1AP62942 108 aaKnown RBP19.94■□□□□ 0.78
ACTN1-209ENST00000553659 SPRYD7Q5W111 196 aa19.94■□□□□ 0.78
ACTN1-209ENST00000553659 ZNF804AQ7Z570 1209 aa19.94■□□□□ 0.78
ACTN1-209ENST00000553659 ARHGAP45Q92619 1136 aa19.94■□□□□ 0.78
ACTN1-209ENST00000553659 CHMP3Q9Y3E7 222 aa19.94■□□□□ 0.78
ACTN1-209ENST00000553659 MVPQ14764 893 aaKnown RBP19.93■□□□□ 0.78
ACTN1-209ENST00000553659 MAP3K11Q16584 847 aa19.93■□□□□ 0.78
ACTN1-209ENST00000553659 LMBR1LQ6UX01 489 aa19.93■□□□□ 0.78
ACTN1-209ENST00000553659 ATF7IPQ6VMQ6 1270 aa19.93■□□□□ 0.78
ACTN1-209ENST00000553659 PPP2R3BQ9Y5P8 575 aa19.93■□□□□ 0.78
ACTN1-209ENST00000553659 TNRC18O15417 2968 aaPredicted RBP19.93■□□□□ 0.78
ACTN1-209ENST00000553659 LAMB1P07942 1786 aa19.93■□□□□ 0.78
ACTN1-209ENST00000553659 MYO1BO43795 1136 aa19.92■□□□□ 0.78
ACTN1-209ENST00000553659 PANK1Q8TE04 598 aa19.92■□□□□ 0.78
ACTN1-209ENST00000553659 SLC10A4Q96EP9 437 aa19.92■□□□□ 0.78
ACTN1-209ENST00000553659 COG6Q9Y2V7 657 aa19.92■□□□□ 0.78
ACTN1-209ENST00000553659 RBM19Q9Y4C8 960 aaKnown RBP19.92■□□□□ 0.78
ACTN1-209ENST00000553659 F8W031 263 aaPredicted RBP19.91■□□□□ 0.78
ACTN1-209ENST00000553659 PPP1R12BO60237 982 aaPredicted RBP19.91■□□□□ 0.78
ACTN1-209ENST00000553659 FKTNO75072 461 aa19.91■□□□□ 0.78
ACTN1-209ENST00000553659 ALDH1A1P00352 501 aa19.91■□□□□ 0.78
ACTN1-209ENST00000553659 INHBEP58166 350 aa19.91■□□□□ 0.78
ACTN1-209ENST00000553659 CCDC57Q2TAC2 916 aa19.91■□□□□ 0.78
ACTN1-209ENST00000553659 CFAP100Q494V2 611 aa19.91■□□□□ 0.78
ACTN1-209ENST00000553659 EPHA10Q5JZY3 1008 aa19.91■□□□□ 0.78
ACTN1-209ENST00000553659 LDHAL6AQ6ZMR3 332 aa19.91■□□□□ 0.78
ACTN1-209ENST00000553659 DDX19BQ9UMR2 479 aa19.91■□□□□ 0.78
ACTN1-209ENST00000553659 FZD1Q9UP38 647 aa19.91■□□□□ 0.78
ACTN1-209ENST00000553659 PCDHAC2Q9Y5I4 1007 aa19.91■□□□□ 0.78
ACTN1-209ENST00000553659 SPDYE2BA6NHP3 402 aa19.9■□□□□ 0.78
ACTN1-209ENST00000553659 MANSC4A6NHS7 340 aaPredicted RBP19.9■□□□□ 0.78
ACTN1-209ENST00000553659 UNCXA6NJT0 531 aa19.9■□□□□ 0.78
ACTN1-209ENST00000553659 GRM8O00222 908 aa19.9■□□□□ 0.78
ACTN1-209ENST00000553659 SPDYE6P0CI01 402 aa19.9■□□□□ 0.78
ACTN1-209ENST00000553659 FBXO46Q6PJ61 603 aaPredicted RBP19.9■□□□□ 0.78
ACTN1-209ENST00000553659 ZNF594Q96JF6 807 aaPredicted RBP19.9■□□□□ 0.78
ACTN1-209ENST00000553659 PRMT6Q96LA8 375 aaPredicted RBP19.9■□□□□ 0.78
ACTN1-209ENST00000553659 R3HDMLQ9H3Y0 253 aa19.9■□□□□ 0.78
ACTN1-209ENST00000553659 SUPT20HL1Q3ZLR7 823 aa19.89■□□□□ 0.77
ACTN1-209ENST00000553659 TAF7LQ5H9L4 462 aa19.89■□□□□ 0.77
ACTN1-209ENST00000553659 CNNM1Q9NRU3 951 aa19.89■□□□□ 0.77
ACTN1-209ENST00000553659 SSC5DA1L4H1 1573 aa19.88■□□□□ 0.77
ACTN1-209ENST00000553659 CLRN2A0PK11 232 aa19.88■□□□□ 0.77
ACTN1-209ENST00000553659 ZBTB48P10074 688 aaPredicted RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms