RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 RASAL3Q86YV0 1011 aa15.75■□□□□ 0.11
SIX1-202ENST00000553535 KIAA0825Q8IV33 1275 aa15.75■□□□□ 0.11
SIX1-202ENST00000553535 MCOLN1Q9GZU1 580 aa15.75■□□□□ 0.11
SIX1-202ENST00000553535 CHMP3Q9Y3E7 222 aa15.75■□□□□ 0.11
SIX1-202ENST00000553535 UBE2Q2LH0YL09 131 aa15.75■□□□□ 0.11
SIX1-202ENST00000553535 SASH1O94885 1247 aa15.75■□□□□ 0.11
SIX1-202ENST00000553535 CCDC57Q2TAC2 916 aa15.75■□□□□ 0.11
SIX1-202ENST00000553535 CERS5Q8N5B7 392 aa15.75■□□□□ 0.11
SIX1-202ENST00000553535 ZNF594Q96JF6 807 aaPredicted RBP15.75■□□□□ 0.11
SIX1-202ENST00000553535 C9orf78Q9NZ63 289 aaPredicted RBP15.75■□□□□ 0.11
SIX1-202ENST00000553535 HDAC9Q9UKV0 1011 aa15.75■□□□□ 0.11
SIX1-202ENST00000553535 TRPA1O75762 1119 aa15.74■□□□□ 0.11
SIX1-202ENST00000553535 IL1R1P14778 569 aa15.74■□□□□ 0.11
SIX1-202ENST00000553535 SLC4A10Q6U841 1118 aa15.74■□□□□ 0.11
SIX1-202ENST00000553535 LDHAL6AQ6ZMR3 332 aa15.74■□□□□ 0.11
SIX1-202ENST00000553535 SRCIN1Q9C0H9 1055 aa15.74■□□□□ 0.11
SIX1-202ENST00000553535 CCDC85CA6NKD9 419 aa15.73■□□□□ 0.11
SIX1-202ENST00000553535 KAZALD1Q96I82 304 aa15.73■□□□□ 0.11
SIX1-202ENST00000553535 DGKZQ13574 1117 aa15.72■□□□□ 0.11
SIX1-202ENST00000553535 ZNF804AQ7Z570 1209 aa15.72■□□□□ 0.11
SIX1-202ENST00000553535 MTMR14Q8NCE2 650 aa15.72■□□□□ 0.11
SIX1-202ENST00000553535 FKBP1AP62942 108 aaKnown RBP15.71■□□□□ 0.11
SIX1-202ENST00000553535 TAF7LQ5H9L4 462 aa15.71■□□□□ 0.11
SIX1-202ENST00000553535 APOBEC3FQ8IUX4 373 aaKnown RBP15.71■□□□□ 0.11
SIX1-202ENST00000553535 MRPL50Q8N5N7 158 aaKnown RBP15.71■□□□□ 0.11
SIX1-202ENST00000553535 SUCLG2Q96I99 432 aa15.71■□□□□ 0.11
SIX1-202ENST00000553535 CNNM1Q9NRU3 951 aa15.71■□□□□ 0.11
SIX1-202ENST00000553535 UTYO14607 1347 aa15.71■□□□□ 0.11
SIX1-202ENST00000553535 PLIN1O60240 522 aa15.7■□□□□ 0.1
SIX1-202ENST00000553535 NBPF7P0C2Y1 421 aaPredicted RBP15.7■□□□□ 0.1
SIX1-202ENST00000553535 NF2P35240 595 aa15.7■□□□□ 0.1
SIX1-202ENST00000553535 RGS19P49795 217 aa15.7■□□□□ 0.1
SIX1-202ENST00000553535 TTLL12Q14166 644 aaPredicted RBP15.7■□□□□ 0.1
SIX1-202ENST00000553535 DLGAP5Q15398 846 aa15.7■□□□□ 0.1
SIX1-202ENST00000553535 PUS3Q9BZE2 481 aaKnown RBP15.7■□□□□ 0.1
SIX1-202ENST00000553535 PCDHAC2Q9Y5I4 1007 aa15.7■□□□□ 0.1
SIX1-202ENST00000553535 PTPN12Q05209 780 aaKnown RBP15.69■□□□□ 0.1
SIX1-202ENST00000553535 UBE4AQ14139 1066 aa15.69■□□□□ 0.1
SIX1-202ENST00000553535 LDLRAD1Q5T700 205 aa15.69■□□□□ 0.1
SIX1-202ENST00000553535 RIPOR2Q9Y4F9 1068 aa15.69■□□□□ 0.1
SIX1-202ENST00000553535 ECM29Q5VYK3 1845 aa15.68■□□□□ 0.1
SIX1-202ENST00000553535 FAM205AQ6ZU69 1335 aa15.68■□□□□ 0.1
SIX1-202ENST00000553535 TM4SF4P48230 202 aa15.68■□□□□ 0.1
SIX1-202ENST00000553535 RABL6Q3YEC7 729 aaPredicted RBP15.68■□□□□ 0.1
SIX1-202ENST00000553535 ARMC9Q7Z3E5 817 aa15.68■□□□□ 0.1
SIX1-202ENST00000553535 TDRD7Q8NHU6 1098 aaKnown RBP15.68■□□□□ 0.1
SIX1-202ENST00000553535 PRMT6Q96LA8 375 aaPredicted RBP15.68■□□□□ 0.1
SIX1-202ENST00000553535 DEFB129Q9H1M3 183 aa15.68■□□□□ 0.1
SIX1-202ENST00000553535 SPDYE2BA6NHP3 402 aa15.67■□□□□ 0.1
SIX1-202ENST00000553535 F8W031 263 aaPredicted RBP15.67■□□□□ 0.1
SIX1-202ENST00000553535 SPDYE6P0CI01 402 aa15.67■□□□□ 0.1
SIX1-202ENST00000553535 PRKG1Q13976 671 aa15.67■□□□□ 0.1
SIX1-202ENST00000553535 CFAP100Q494V2 611 aa15.67■□□□□ 0.1
SIX1-202ENST00000553535 FAM84BQ96KN1 310 aaPredicted RBP15.67■□□□□ 0.1
SIX1-202ENST00000553535 JAG2Q9Y219 1238 aa15.67■□□□□ 0.1
SIX1-202ENST00000553535 COL1A1P02452 1464 aaPredicted RBP15.67■□□□□ 0.1
SIX1-202ENST00000553535 E9PSI1 815 aa15.66■□□□□ 0.1
SIX1-202ENST00000553535 HIBADHP31937 336 aaKnown RBP15.66■□□□□ 0.1
SIX1-202ENST00000553535 SLFN5Q08AF3 891 aa15.66■□□□□ 0.1
SIX1-202ENST00000553535 ANKRD44Q8N8A2 993 aa15.66■□□□□ 0.1
SIX1-202ENST00000553535 SSH1Q8WYL5 1049 aa15.66■□□□□ 0.1
SIX1-202ENST00000553535 BICC1Q9H694 974 aaKnown RBP15.66■□□□□ 0.1
SIX1-202ENST00000553535 PTPRCP08575 1304 aa15.66■□□□□ 0.1
SIX1-202ENST00000553535 AOX1Q06278 1338 aa15.66■□□□□ 0.1
SIX1-202ENST00000553535 GYG1P46976 350 aa15.66■□□□□ 0.1
SIX1-202ENST00000553535 MAP3K11Q16584 847 aa15.66■□□□□ 0.1
SIX1-202ENST00000553535 ANGEL1Q9UNK9 670 aaKnown RBP15.66■□□□□ 0.1
SIX1-202ENST00000553535 FZD1Q9UP38 647 aa15.66■□□□□ 0.1
SIX1-202ENST00000553535 PPP2R3BQ9Y5P8 575 aa15.66■□□□□ 0.1
SIX1-202ENST00000553535 MROH5Q6ZUA9 1318 aa15.65■□□□□ 0.1
SIX1-202ENST00000553535 CLRN2A0PK11 232 aa15.65■□□□□ 0.1
SIX1-202ENST00000553535 MYO1BO43795 1136 aa15.65■□□□□ 0.1
SIX1-202ENST00000553535 USP44Q9H0E7 712 aa15.65■□□□□ 0.1
SIX1-202ENST00000553535 TBC1D8O95759 1140 aa15.64■□□□□ 0.09
SIX1-202ENST00000553535 MLLT1Q03111 559 aaPredicted RBP15.64■□□□□ 0.09
SIX1-202ENST00000553535 MKRN3Q13064 507 aaKnown RBP15.64■□□□□ 0.09
SIX1-202ENST00000553535 LRRC24Q50LG9 513 aa15.64■□□□□ 0.09
SIX1-202ENST00000553535 MFSD14BQ5SR56 506 aa15.64■□□□□ 0.09
SIX1-202ENST00000553535 SPRYD7Q5W111 196 aa15.64■□□□□ 0.09
SIX1-202ENST00000553535 FBXO33Q7Z6M2 555 aa15.64■□□□□ 0.09
SIX1-202ENST00000553535 CTU1Q7Z7A3 348 aaKnown RBP15.64■□□□□ 0.09
SIX1-202ENST00000553535 SSC5DA1L4H1 1573 aa15.63■□□□□ 0.09
SIX1-202ENST00000553535 PPP1R12BO60237 982 aaPredicted RBP15.62■□□□□ 0.09
SIX1-202ENST00000553535 RBM5P52756 815 aaKnown RBP eCLIP15.62■□□□□ 0.09
SIX1-202ENST00000553535 SREBF2Q12772 1141 aa15.62■□□□□ 0.09
SIX1-202ENST00000553535 SUPT20HL1Q3ZLR7 823 aa15.62■□□□□ 0.09
SIX1-202ENST00000553535 NOM1Q5C9Z4 860 aaKnown RBP15.62■□□□□ 0.09
SIX1-202ENST00000553535 NBPF12Q5TAG4 269 aaPredicted RBP15.62■□□□□ 0.09
SIX1-202ENST00000553535 VGLL2Q8N8G2 317 aa15.62■□□□□ 0.09
SIX1-202ENST00000553535 SLC10A4Q96EP9 437 aa15.62■□□□□ 0.09
SIX1-202ENST00000553535 CDCA7LQ96GN5 454 aa15.62■□□□□ 0.09
SIX1-202ENST00000553535 VEZTQ9HBM0 779 aa15.62■□□□□ 0.09
SIX1-202ENST00000553535 SERPINA10Q9UK55 444 aa15.62■□□□□ 0.09
SIX1-202ENST00000553535 TTF2Q9UNY4 1162 aaKnown RBP15.62■□□□□ 0.09
SIX1-202ENST00000553535 UNCXA6NJT0 531 aa15.62■□□□□ 0.09
SIX1-202ENST00000553535 RASA3Q14644 834 aa15.62■□□□□ 0.09
SIX1-202ENST00000553535 ALDH1L2Q3SY69 923 aa15.62■□□□□ 0.09
SIX1-202ENST00000553535 TRMT2AQ8IZ69 625 aaKnown RBP15.62■□□□□ 0.09
SIX1-202ENST00000553535 ZNF296Q8WUU4 475 aaPredicted RBP15.62■□□□□ 0.09
SIX1-202ENST00000553535 CFHR5Q9BXR6 569 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms