RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 PPP4R2Q9NY27 417 aa18.22■□□□□ 0.51
MTHFD1-204ENST00000553405 HMG20BQ9P0W2 317 aa18.22■□□□□ 0.51
MTHFD1-204ENST00000553405 POTECB2RU33 542 aa18.21■□□□□ 0.51
MTHFD1-204ENST00000553405 DDNO94850 711 aaPredicted RBP18.21■□□□□ 0.51
MTHFD1-204ENST00000553405 IFIT2P09913 472 aaKnown RBP18.21■□□□□ 0.51
MTHFD1-204ENST00000553405 EIF6P56537 245 aaKnown RBP18.21■□□□□ 0.51
MTHFD1-204ENST00000553405 GTF2IP78347 998 aa18.21■□□□□ 0.51
MTHFD1-204ENST00000553405 L3MBTL3Q96JM7 780 aaPredicted RBP18.21■□□□□ 0.51
MTHFD1-204ENST00000553405 LNPKQ9C0E8 428 aa18.21■□□□□ 0.51
MTHFD1-204ENST00000553405 JAG2Q9Y219 1238 aa18.21■□□□□ 0.51
MTHFD1-204ENST00000553405 PDE4AP27815 886 aa18.2■□□□□ 0.5
MTHFD1-204ENST00000553405 SCNN1DP51172 638 aa18.2■□□□□ 0.5
MTHFD1-204ENST00000553405 FKBP1AP62942 108 aaKnown RBP18.2■□□□□ 0.5
MTHFD1-204ENST00000553405 GRIK5Q16478 980 aa18.2■□□□□ 0.5
MTHFD1-204ENST00000553405 TTLL5Q6EMB2 1281 aa18.2■□□□□ 0.5
MTHFD1-204ENST00000553405 RSBN1LQ6PCB5 846 aaPredicted RBP18.2■□□□□ 0.5
MTHFD1-204ENST00000553405 CENPQQ7L2Z9 268 aaPredicted RBP18.2■□□□□ 0.5
MTHFD1-204ENST00000553405 VPS37DQ86XT2 251 aa18.2■□□□□ 0.5
MTHFD1-204ENST00000553405 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.2■□□□□ 0.5
MTHFD1-204ENST00000553405 SALL1Q9NSC2 1324 aa18.2■□□□□ 0.5
MTHFD1-204ENST00000553405 G3V3G9 751 aa18.19■□□□□ 0.5
MTHFD1-204ENST00000553405 UQCRFS1P1P0C7P4 283 aa18.19■□□□□ 0.5
MTHFD1-204ENST00000553405 ATP5JP18859 108 aa18.19■□□□□ 0.5
MTHFD1-204ENST00000553405 TNIP1Q15025 636 aa18.19■□□□□ 0.5
MTHFD1-204ENST00000553405 GORABQ5T7V8 394 aa18.19■□□□□ 0.5
MTHFD1-204ENST00000553405 DCAF8Q5TAQ9 597 aa18.19■□□□□ 0.5
MTHFD1-204ENST00000553405 PI4K2BQ8TCG2 481 aa18.19■□□□□ 0.5
MTHFD1-204ENST00000553405 GNL3LQ9NVN8 582 aaKnown RBP18.19■□□□□ 0.5
MTHFD1-204ENST00000553405 STAP2Q9UGK3 403 aa18.19■□□□□ 0.5
MTHFD1-204ENST00000553405 DENND2AQ9ULE3 1009 aa18.19■□□□□ 0.5
MTHFD1-204ENST00000553405 ZBTB12Q9Y330 459 aaPredicted RBP18.19■□□□□ 0.5
MTHFD1-204ENST00000553405 SHTN1A0MZ66 631 aa18.18■□□□□ 0.5
MTHFD1-204ENST00000553405 GMPSP49915 693 aaPredicted RBP18.18■□□□□ 0.5
MTHFD1-204ENST00000553405 CCDC158Q5M9N0 1113 aa18.18■□□□□ 0.5
MTHFD1-204ENST00000553405 TSHZ3Q63HK5 1081 aa18.18■□□□□ 0.5
MTHFD1-204ENST00000553405 SPATA5Q8NB90 893 aa18.18■□□□□ 0.5
MTHFD1-204ENST00000553405 CCDC136Q96JN2 1154 aa18.18■□□□□ 0.5
MTHFD1-204ENST00000553405 CHAF1AQ13111 956 aaPredicted RBP18.17■□□□□ 0.5
MTHFD1-204ENST00000553405 TTC39AQ5SRH9 613 aa18.17■□□□□ 0.5
MTHFD1-204ENST00000553405 AGBL3Q8NEM8 1001 aa18.17■□□□□ 0.5
MTHFD1-204ENST00000553405 DPF2Q92785 391 aa18.17■□□□□ 0.5
MTHFD1-204ENST00000553405 ECHDC1Q9NTX5 307 aa18.17■□□□□ 0.5
MTHFD1-204ENST00000553405 DOCK2Q92608 1830 aa18.16■□□□□ 0.5
MTHFD1-204ENST00000553405 MYO5AQ9Y4I1 1855 aaKnown RBP18.16■□□□□ 0.5
MTHFD1-204ENST00000553405 CYP2E1P05181 493 aaPredicted RBP18.16■□□□□ 0.5
MTHFD1-204ENST00000553405 MX1P20591 662 aa18.16■□□□□ 0.5
MTHFD1-204ENST00000553405 RPS12P25398 132 aaKnown RBP18.16■□□□□ 0.5
MTHFD1-204ENST00000553405 PDE1AP54750 535 aa18.16■□□□□ 0.5
MTHFD1-204ENST00000553405 MFSD14BQ5SR56 506 aa18.16■□□□□ 0.5
MTHFD1-204ENST00000553405 PLEKHM2Q8IWE5 1019 aa18.16■□□□□ 0.5
MTHFD1-204ENST00000553405 ZNF384Q8TF68 577 aa18.16■□□□□ 0.5
MTHFD1-204ENST00000553405 SNRKQ9NRH2 765 aa18.16■□□□□ 0.5
MTHFD1-204ENST00000553405 GJA3Q9Y6H8 435 aa18.16■□□□□ 0.5
MTHFD1-204ENST00000553405 NDUFB9Q9Y6M9 179 aa18.16■□□□□ 0.5
MTHFD1-204ENST00000553405 TTC41PQ6P2S7 1318 aa18.16■□□□□ 0.5
MTHFD1-204ENST00000553405 MYO3BQ8WXR4 1341 aa18.16■□□□□ 0.5
MTHFD1-204ENST00000553405 SCN4AP35499 1836 aa18.16■□□□□ 0.5
MTHFD1-204ENST00000553405 ADAMTSL1Q8N6G6 1762 aa18.15■□□□□ 0.5
MTHFD1-204ENST00000553405 ZAP70P43403 619 aa18.15■□□□□ 0.5
MTHFD1-204ENST00000553405 ZNF280AP59817 542 aaPredicted RBP18.15■□□□□ 0.5
MTHFD1-204ENST00000553405 DPY19L2Q6NUT2 758 aa18.15■□□□□ 0.5
MTHFD1-204ENST00000553405 WDR66Q8TBY9 1149 aa18.15■□□□□ 0.5
MTHFD1-204ENST00000553405 BCL11AQ9H165 835 aa18.15■□□□□ 0.5
MTHFD1-204ENST00000553405 OSBPL3Q9H4L5 887 aa18.15■□□□□ 0.5
MTHFD1-204ENST00000553405 GPRC5DQ9NZD1 345 aa18.15■□□□□ 0.5
MTHFD1-204ENST00000553405 TBC1D9Q6ZT07 1266 aa18.14■□□□□ 0.49
MTHFD1-204ENST00000553405 TBC1D22AQ8WUA7 517 aa18.14■□□□□ 0.49
MTHFD1-204ENST00000553405 HAUS7Q99871 368 aa18.14■□□□□ 0.49
MTHFD1-204ENST00000553405 ANTXR1Q9H6X2 564 aa18.14■□□□□ 0.49
MTHFD1-204ENST00000553405 PIH1D3Q9NQM4 214 aaKnown RBP18.14■□□□□ 0.49
MTHFD1-204ENST00000553405 FRAT2O75474 233 aaPredicted RBP18.13■□□□□ 0.49
MTHFD1-204ENST00000553405 EGFRP00533 1210 aa18.13■□□□□ 0.49
MTHFD1-204ENST00000553405 PRDX5P30044 214 aa18.13■□□□□ 0.49
MTHFD1-204ENST00000553405 EPS15P42566 896 aa18.13■□□□□ 0.49
MTHFD1-204ENST00000553405 SKAP1Q86WV1 359 aa18.13■□□□□ 0.49
MTHFD1-204ENST00000553405 FBXW7Q969H0 707 aa18.13■□□□□ 0.49
MTHFD1-204ENST00000553405 ZBED3Q96IU2 234 aaPredicted RBP18.13■□□□□ 0.49
MTHFD1-204ENST00000553405 SUGT1Q9Y2Z0 365 aa18.13■□□□□ 0.49
MTHFD1-204ENST00000553405 AOX1Q06278 1338 aa18.13■□□□□ 0.49
MTHFD1-204ENST00000553405 YY1P25490 414 aa18.12■□□□□ 0.49
MTHFD1-204ENST00000553405 KIAA0825Q8IV33 1275 aa18.12■□□□□ 0.49
MTHFD1-204ENST00000553405 EDC3Q96F86 508 aaKnown RBP18.12■□□□□ 0.49
MTHFD1-204ENST00000553405 BOLA2Q9H3K6 86 aa18.12■□□□□ 0.49
MTHFD1-204ENST00000553405 NMRK2Q9NPI5 230 aa18.12■□□□□ 0.49
MTHFD1-204ENST00000553405 CNOT7Q9UIV1 285 aaKnown RBP18.12■□□□□ 0.49
MTHFD1-204ENST00000553405 MAST2Q6P0Q8 1798 aa18.12■□□□□ 0.49
MTHFD1-204ENST00000553405 USP17L8P0C7I0 530 aa18.11■□□□□ 0.49
MTHFD1-204ENST00000553405 MICALL2Q8IY33 904 aa18.11■□□□□ 0.49
MTHFD1-204ENST00000553405 GLRX3O76003 335 aaKnown RBP18.1■□□□□ 0.49
MTHFD1-204ENST00000553405 GPATCH3Q96I76 525 aa18.1■□□□□ 0.49
MTHFD1-204ENST00000553405 TAF1DQ9H5J8 278 aaPredicted RBP18.1■□□□□ 0.49
MTHFD1-204ENST00000553405 MMP14P50281 582 aa18.09■□□□□ 0.49
MTHFD1-204ENST00000553405 HIRAP54198 1017 aaPredicted RBP18.09■□□□□ 0.49
MTHFD1-204ENST00000553405 ZNF784Q8NCA9 323 aaPredicted RBP18.09■□□□□ 0.49
MTHFD1-204ENST00000553405 MTMR14Q8NCE2 650 aa18.09■□□□□ 0.49
MTHFD1-204ENST00000553405 TRPM4Q8TD43 1214 aa18.09■□□□□ 0.49
MTHFD1-204ENST00000553405 NSUN4Q96CB9 384 aaKnown RBP18.09■□□□□ 0.49
MTHFD1-204ENST00000553405 MRIQ9BWK5 157 aa18.09■□□□□ 0.49
MTHFD1-204ENST00000553405 RRAGCQ9HB90 399 aa18.09■□□□□ 0.49
MTHFD1-204ENST00000553405 PAG1Q9NWQ8 432 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms