RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 ABT1Q9ULW3 272 aaKnown RBP19.04■□□□□ 0.64
SHMT2-204ENST00000553324 CELF2O95319 508 aaKnown RBP19.03■□□□□ 0.64
SHMT2-204ENST00000553324 RLBP1P12271 317 aa19.03■□□□□ 0.64
SHMT2-204ENST00000553324 DEFB115Q30KQ5 88 aa19.03■□□□□ 0.64
SHMT2-204ENST00000553324 CST9Q5W186 159 aa19.03■□□□□ 0.64
SHMT2-204ENST00000553324 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.03■□□□□ 0.64
SHMT2-204ENST00000553324 CHMP4BQ9H444 224 aaKnown RBP19.03■□□□□ 0.64
SHMT2-204ENST00000553324 GGA3Q9NZ52 723 aa19.03■□□□□ 0.64
SHMT2-204ENST00000553324 PA2G4Q9UQ80 394 aaKnown RBP19.03■□□□□ 0.64
SHMT2-204ENST00000553324 AKAP2Q9Y2D5 859 aa19.03■□□□□ 0.64
SHMT2-204ENST00000553324 WNT10BO00744 389 aa19.02■□□□□ 0.64
SHMT2-204ENST00000553324 BCAMP50895 628 aa19.02■□□□□ 0.64
SHMT2-204ENST00000553324 ATP8B2P98198 1209 aa19.02■□□□□ 0.64
SHMT2-204ENST00000553324 G3BP1Q13283 466 aaKnown RBP eCLIP19.02■□□□□ 0.648e-8■■■□□ 16.6
SHMT2-204ENST00000553324 ATP2B3Q16720 1220 aa19.02■□□□□ 0.64
SHMT2-204ENST00000553324 MFSD14BQ5SR56 506 aa19.02■□□□□ 0.64
SHMT2-204ENST00000553324 ANGEL2Q5VTE6 544 aaKnown RBP19.02■□□□□ 0.64
SHMT2-204ENST00000553324 MTMR14Q8NCE2 650 aa19.02■□□□□ 0.64
SHMT2-204ENST00000553324 GNL3LQ9NVN8 582 aaKnown RBP19.02■□□□□ 0.64
SHMT2-204ENST00000553324 MKRN1Q9UHC7 482 aaKnown RBP19.02■□□□□ 0.64
SHMT2-204ENST00000553324 RASSF10A6NK89 507 aa19.01■□□□□ 0.63
SHMT2-204ENST00000553324 DLGAP5Q15398 846 aa19.01■□□□□ 0.63
SHMT2-204ENST00000553324 CERS5Q8N5B7 392 aa19.01■□□□□ 0.63
SHMT2-204ENST00000553324 CNTNAP1P78357 1384 aa19.01■□□□□ 0.63
SHMT2-204ENST00000553324 MYO1BO43795 1136 aa19■□□□□ 0.63
SHMT2-204ENST00000553324 FMR1Q06787 632 aaKnown RBP eCLIP19■□□□□ 0.63
SHMT2-204ENST00000553324 NBPF9Q3BBW0 867 aa19■□□□□ 0.63
SHMT2-204ENST00000553324 PANK1Q8TE04 598 aa19■□□□□ 0.63
SHMT2-204ENST00000553324 SUGT1Q9Y2Z0 365 aa19■□□□□ 0.63
SHMT2-204ENST00000553324 TLL2Q9Y6L7 1015 aa19■□□□□ 0.63
SHMT2-204ENST00000553324 PNMA6EA0A0J9YXQ4 647 aa18.99■□□□□ 0.63
SHMT2-204ENST00000553324 HHIPL1Q96JK4 782 aa18.99■□□□□ 0.63
SHMT2-204ENST00000553324 ZNF408Q9H9D4 720 aa18.99■□□□□ 0.63
SHMT2-204ENST00000553324 JAG2Q9Y219 1238 aa18.99■□□□□ 0.63
SHMT2-204ENST00000553324 PSME4Q14997 1843 aa18.99■□□□□ 0.63
SHMT2-204ENST00000553324 F8W031 263 aaPredicted RBP18.98■□□□□ 0.63
SHMT2-204ENST00000553324 ZBTB22O15209 634 aa18.98■□□□□ 0.63
SHMT2-204ENST00000553324 ECE1P42892 770 aa18.98■□□□□ 0.63
SHMT2-204ENST00000553324 POLA2Q14181 598 aa18.98■□□□□ 0.63
SHMT2-204ENST00000553324 SAPCD2Q86UD0 394 aa18.98■□□□□ 0.63
SHMT2-204ENST00000553324 C2orf69Q8N8R5 385 aa18.98■□□□□ 0.63
SHMT2-204ENST00000553324 WDR66Q8TBY9 1149 aa18.98■□□□□ 0.63
SHMT2-204ENST00000553324 SSH3Q8TE77 659 aa18.98■□□□□ 0.63
SHMT2-204ENST00000553324 ZBED3Q96IU2 234 aaPredicted RBP18.98■□□□□ 0.63
SHMT2-204ENST00000553324 SERPINA10Q9UK55 444 aa18.98■□□□□ 0.63
SHMT2-204ENST00000553324 DDX19BQ9UMR2 479 aa18.98■□□□□ 0.63
SHMT2-204ENST00000553324 TTF2Q9UNY4 1162 aaKnown RBP18.98■□□□□ 0.63
SHMT2-204ENST00000553324 ADM5C9JUS6 153 aa18.97■□□□□ 0.63
SHMT2-204ENST00000553324 SEMA3EO15041 775 aa18.97■□□□□ 0.63
SHMT2-204ENST00000553324 RBM5P52756 815 aaKnown RBP eCLIP18.97■□□□□ 0.63
SHMT2-204ENST00000553324 CHAF1AQ13111 956 aaPredicted RBP18.97■□□□□ 0.63
SHMT2-204ENST00000553324 PDE3AQ14432 1141 aa18.97■□□□□ 0.63
SHMT2-204ENST00000553324 MVPQ14764 893 aaKnown RBP18.97■□□□□ 0.63
SHMT2-204ENST00000553324 CFAP100Q494V2 611 aa18.97■□□□□ 0.63
SHMT2-204ENST00000553324 APOBEC3FQ8IUX4 373 aaKnown RBP18.97■□□□□ 0.63
SHMT2-204ENST00000553324 MRIQ9BWK5 157 aa18.97■□□□□ 0.63
SHMT2-204ENST00000553324 IQSEC3Q9UPP2 1182 aaPredicted RBP18.97■□□□□ 0.63
SHMT2-204ENST00000553324 ASTN2O75129 1339 aaPredicted RBP18.97■□□□□ 0.63
SHMT2-204ENST00000553324 VEGFBP49765 207 aa18.96■□□□□ 0.63
SHMT2-204ENST00000553324 TIMM10P62072 90 aa18.96■□□□□ 0.63
SHMT2-204ENST00000553324 HDLBPQ00341 1268 aaKnown RBP18.96■□□□□ 0.63
SHMT2-204ENST00000553324 TFCP2Q12800 502 aa18.96■□□□□ 0.63
SHMT2-204ENST00000553324 DENND2AQ9ULE3 1009 aa18.96■□□□□ 0.63
SHMT2-204ENST00000553324 PCNTO95613 3336 aa18.95■□□□□ 0.62
SHMT2-204ENST00000553324 SPDYE2BA6NHP3 402 aa18.95■□□□□ 0.62
SHMT2-204ENST00000553324 SPDYE6P0CI01 402 aa18.95■□□□□ 0.62
SHMT2-204ENST00000553324 FKBP1BP68106 108 aa18.95■□□□□ 0.62
SHMT2-204ENST00000553324 CDCA5Q96FF9 252 aa18.95■□□□□ 0.62
SHMT2-204ENST00000553324 C1orf115Q9H7X2 142 aa18.95■□□□□ 0.62
SHMT2-204ENST00000553324 GBA2Q9HCG7 927 aaPredicted RBP18.95■□□□□ 0.62
SHMT2-204ENST00000553324 A0A1B0GUL6 1792 aa18.95■□□□□ 0.62
SHMT2-204ENST00000553324 A0A1B0GUL7 405 aa18.94■□□□□ 0.62
SHMT2-204ENST00000553324 SURF6O75683 361 aaKnown RBP18.94■□□□□ 0.62
SHMT2-204ENST00000553324 NF2P35240 595 aa18.94■□□□□ 0.62
SHMT2-204ENST00000553324 OS9Q13438 667 aaPredicted RBP18.94■□□□□ 0.62
SHMT2-204ENST00000553324 CCDC102BQ68D86 513 aa18.94■□□□□ 0.62
SHMT2-204ENST00000553324 PRMT6Q96LA8 375 aaPredicted RBP18.94■□□□□ 0.62
SHMT2-204ENST00000553324 NOP58Q9Y2X3 529 aaKnown RBP18.94■□□□□ 0.62
SHMT2-204ENST00000553324 MAST3O60307 1309 aa18.94■□□□□ 0.62
SHMT2-204ENST00000553324 WDR33Q9C0J8 1336 aaKnown RBP18.94■□□□□ 0.62
SHMT2-204ENST00000553324 CEP85Q6P2H3 762 aa18.93■□□□□ 0.62
SHMT2-204ENST00000553324 PAXIP1Q6ZW49 1069 aaPredicted RBP18.93■□□□□ 0.62
SHMT2-204ENST00000553324 RPAP2Q8IXW5 612 aaPredicted RBP18.93■□□□□ 0.62
SHMT2-204ENST00000553324 ZGPATQ8N5A5 531 aaKnown RBP18.93■□□□□ 0.62
SHMT2-204ENST00000553324 XAGE2Q96GT9 111 aa18.93■□□□□ 0.62
SHMT2-204ENST00000553324 NEUROD6Q96NK8 337 aa18.93■□□□□ 0.62
SHMT2-204ENST00000553324 GPR108Q9NPR9 543 aa18.93■□□□□ 0.62
SHMT2-204ENST00000553324 COG6Q9Y2V7 657 aa18.93■□□□□ 0.62
SHMT2-204ENST00000553324 PPP2R3BQ9Y5P8 575 aa18.93■□□□□ 0.62
SHMT2-204ENST00000553324 CRKP46108 304 aa18.92■□□□□ 0.62
SHMT2-204ENST00000553324 HUNKP57058 714 aa18.92■□□□□ 0.62
SHMT2-204ENST00000553324 GORABQ5T7V8 394 aa18.92■□□□□ 0.62
SHMT2-204ENST00000553324 DLK2Q6UY11 383 aa18.92■□□□□ 0.62
SHMT2-204ENST00000553324 TEKT1Q969V4 418 aa18.92■□□□□ 0.62
SHMT2-204ENST00000553324 CAPNS2Q96L46 248 aa18.92■□□□□ 0.62
SHMT2-204ENST00000553324 ZBTB40Q9NUA8 1239 aa18.92■□□□□ 0.62
SHMT2-204ENST00000553324 MAP2K2P36507 400 aa18.91■□□□□ 0.62
SHMT2-204ENST00000553324 PHKA1P46020 1223 aa18.91■□□□□ 0.62
SHMT2-204ENST00000553324 MAP2K1Q02750 393 aaPredicted RBP18.91■□□□□ 0.62
SHMT2-204ENST00000553324 TNFAIP1Q13829 316 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms