RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 APOBEC3FQ8IUX4 373 aaKnown RBP6.85□□□□□ -1.31
CKAP4-203ENST00000553039 CCDC82Q8N4S0 544 aa6.85□□□□□ -1.31
CKAP4-203ENST00000553039 SH3TC2Q8TF17 1288 aa6.85□□□□□ -1.31
CKAP4-203ENST00000553039 WNK4Q96J92 1243 aa6.85□□□□□ -1.31
CKAP4-203ENST00000553039 RNF208Q9H0X6 261 aa6.85□□□□□ -1.31
CKAP4-203ENST00000553039 PANK3Q9H999 370 aa6.85□□□□□ -1.31
CKAP4-203ENST00000553039 KNSTRNQ9Y448 316 aa6.85□□□□□ -1.31
CKAP4-203ENST00000553039 RPTORQ8N122 1335 aa6.84□□□□□ -1.31
CKAP4-203ENST00000553039 FARP2O94887 1054 aaPredicted RBP6.84□□□□□ -1.31
CKAP4-203ENST00000553039 TFRCP02786 760 aaKnown RBP6.84□□□□□ -1.31
CKAP4-203ENST00000553039 HCLS1P14317 486 aaPredicted RBP6.84□□□□□ -1.31
CKAP4-203ENST00000553039 RPS8P62241 208 aaKnown RBP6.84□□□□□ -1.31
CKAP4-203ENST00000553039 HIC1Q14526 733 aa6.84□□□□□ -1.31
CKAP4-203ENST00000553039 TAF7Q15545 349 aaPredicted RBP6.84□□□□□ -1.31
CKAP4-203ENST00000553039 TAF1CQ15572 869 aaPredicted RBP6.84□□□□□ -1.31
CKAP4-203ENST00000553039 NBPF9Q3BBW0 867 aa6.84□□□□□ -1.31
CKAP4-203ENST00000553039 TTLL7Q6ZT98 887 aa6.84□□□□□ -1.31
CKAP4-203ENST00000553039 UBE2Q1Q7Z7E8 422 aa6.84□□□□□ -1.31
CKAP4-203ENST00000553039 TBC1D16Q8TBP0 767 aa6.84□□□□□ -1.31
CKAP4-203ENST00000553039 RAET1EQ8TD07 263 aa6.84□□□□□ -1.31
CKAP4-203ENST00000553039 GMLQ99445 158 aa6.84□□□□□ -1.31
CKAP4-203ENST00000553039 GDF15Q99988 308 aa6.84□□□□□ -1.31
CKAP4-203ENST00000553039 ZBTB3Q9H5J0 574 aa6.84□□□□□ -1.31
CKAP4-203ENST00000553039 ANKIB1Q9P2G1 1089 aa6.84□□□□□ -1.31
CKAP4-203ENST00000553039 TRMT112Q9UI30 125 aaKnown RBP6.84□□□□□ -1.31
CKAP4-203ENST00000553039 POLR2AP24928 1970 aaKnown RBP6.84□□□□□ -1.32
CKAP4-203ENST00000553039 SZT2Q5T011 3432 aa6.83□□□□□ -1.32
CKAP4-203ENST00000553039 RTL9Q8NET4 1388 aa6.83□□□□□ -1.32
CKAP4-203ENST00000553039 WNT10BO00744 389 aa6.83□□□□□ -1.32
CKAP4-203ENST00000553039 HTATSF1O43719 755 aaKnown RBP6.83□□□□□ -1.32
CKAP4-203ENST00000553039 SGPL1O95470 568 aa6.83□□□□□ -1.32
CKAP4-203ENST00000553039 GRK4P32298 578 aa6.83□□□□□ -1.32
CKAP4-203ENST00000553039 GTF2A2P52657 109 aa6.83□□□□□ -1.32
CKAP4-203ENST00000553039 EIF4G2P78344 907 aaKnown RBP eCLIP6.83□□□□□ -1.32
CKAP4-203ENST00000553039 GPSM2P81274 684 aa6.83□□□□□ -1.32
CKAP4-203ENST00000553039 FOXK1P85037 733 aa6.83□□□□□ -1.32
CKAP4-203ENST00000553039 MTFR1Q15390 333 aa6.83□□□□□ -1.32
CKAP4-203ENST00000553039 SLC51AQ86UW1 340 aa6.83□□□□□ -1.32
CKAP4-203ENST00000553039 ANKRD13AQ8IZ07 590 aa6.83□□□□□ -1.32
CKAP4-203ENST00000553039 TDHQ8IZJ6 230 aa6.83□□□□□ -1.32
CKAP4-203ENST00000553039 PNISRQ8TF01 805 aaKnown RBP6.83□□□□□ -1.32
CKAP4-203ENST00000553039 U2AF1L4Q8WU68 220 aaKnown RBP6.83□□□□□ -1.32
CKAP4-203ENST00000553039 PTPN18Q99952 460 aa6.83□□□□□ -1.32
CKAP4-203ENST00000553039 TRAIPQ9BWF2 469 aa6.83□□□□□ -1.32
CKAP4-203ENST00000553039 SCAF8Q9UPN6 1271 aaKnown RBP6.83□□□□□ -1.32
CKAP4-203ENST00000553039 ANKRD26Q9UPS8 1709 aa6.83□□□□□ -1.32
CKAP4-203ENST00000553039 SCN11AQ9UI33 1791 aa6.82□□□□□ -1.32
CKAP4-203ENST00000553039 UBN2Q6ZU65 1347 aa6.82□□□□□ -1.32
CKAP4-203ENST00000553039 SH3TC1Q8TE82 1336 aa6.82□□□□□ -1.32
CKAP4-203ENST00000553039 TNFRSF10AO00220 468 aa6.82□□□□□ -1.32
CKAP4-203ENST00000553039 U2SURPO15042 1029 aaKnown RBP6.82□□□□□ -1.32
CKAP4-203ENST00000553039 CCL5P13501 91 aa6.82□□□□□ -1.32
CKAP4-203ENST00000553039 HSP90B1P14625 803 aaKnown RBP6.82□□□□□ -1.32
CKAP4-203ENST00000553039 MYL6BP14649 208 aa6.82□□□□□ -1.32
CKAP4-203ENST00000553039 BCAMP50895 628 aa6.82□□□□□ -1.32
CKAP4-203ENST00000553039 LACTBP83111 547 aaPredicted RBP6.82□□□□□ -1.32
CKAP4-203ENST00000553039 GOLGA2Q08379 1002 aa6.82□□□□□ -1.32
CKAP4-203ENST00000553039 PCMTD1Q96MG8 357 aaPredicted RBP6.82□□□□□ -1.32
CKAP4-203ENST00000553039 DEFB129Q9H1M3 183 aa6.82□□□□□ -1.32
CKAP4-203ENST00000553039 GGA1Q9UJY5 639 aa6.82□□□□□ -1.32
CKAP4-203ENST00000553039 PPP2R3BQ9Y5P8 575 aa6.82□□□□□ -1.32
CKAP4-203ENST00000553039 PAPPA2Q9BXP8 1791 aa6.82□□□□□ -1.32
CKAP4-203ENST00000553039 MYO3BQ8WXR4 1341 aa6.81□□□□□ -1.32
CKAP4-203ENST00000553039 POTEB2H3BUK9 544 aa6.81□□□□□ -1.32
CKAP4-203ENST00000553039 MYO1BO43795 1136 aa6.81□□□□□ -1.32
CKAP4-203ENST00000553039 TLR2O60603 784 aa6.81□□□□□ -1.32
CKAP4-203ENST00000553039 DSG2Q14126 1118 aa6.81□□□□□ -1.32
CKAP4-203ENST00000553039 MCM6Q14566 821 aa6.81□□□□□ -1.32
CKAP4-203ENST00000553039 SF3B3Q15393 1217 aaKnown RBP6.81□□□□□ -1.32
CKAP4-203ENST00000553039 NECAB2Q7Z6G3 386 aa6.81□□□□□ -1.32
CKAP4-203ENST00000553039 CLUAP1Q96AJ1 413 aa6.81□□□□□ -1.32
CKAP4-203ENST00000553039 SHISA4Q96DD7 197 aa6.81□□□□□ -1.32
CKAP4-203ENST00000553039 UBE2OQ9C0C9 1292 aaKnown RBP6.81□□□□□ -1.32
CKAP4-203ENST00000553039 ZCCHC17Q9NP64 241 aaKnown RBP6.81□□□□□ -1.32
CKAP4-203ENST00000553039 SRRDQ9UH36 339 aa6.81□□□□□ -1.32
CKAP4-203ENST00000553039 RIPOR2Q9Y4F9 1068 aa6.81□□□□□ -1.32
CKAP4-203ENST00000553039 ZNF609O15014 1411 aa6.81□□□□□ -1.32
CKAP4-203ENST00000553039 CEMIPQ8WUJ3 1361 aa6.81□□□□□ -1.32
CKAP4-203ENST00000553039 SCN7AQ01118 1682 aa6.81□□□□□ -1.32
CKAP4-203ENST00000553039 IRS2Q9Y4H2 1338 aa6.8□□□□□ -1.32
CKAP4-203ENST00000553039 UFL1O94874 794 aa6.8□□□□□ -1.32
CKAP4-203ENST00000553039 FMNL1O95466 1100 aaPredicted RBP6.8□□□□□ -1.32
CKAP4-203ENST00000553039 PRKAR2AP13861 404 aaKnown RBP6.8□□□□□ -1.32
CKAP4-203ENST00000553039 NLRP10Q86W26 655 aa6.8□□□□□ -1.32
CKAP4-203ENST00000553039 KCTD17Q8N5Z5 321 aa6.8□□□□□ -1.32
CKAP4-203ENST00000553039 CELF1Q92879 486 aaKnown RBP6.8□□□□□ -1.32
CKAP4-203ENST00000553039 CLMNQ96JQ2 1002 aa6.8□□□□□ -1.32
CKAP4-203ENST00000553039 KIF20BQ96Q89 1820 aa6.8□□□□□ -1.32
CKAP4-203ENST00000553039 MKI67P46013 3256 aaKnown RBP6.79□□□□□ -1.32
CKAP4-203ENST00000553039 TMEM265A0A087WTH1 108 aa6.79□□□□□ -1.32
CKAP4-203ENST00000553039 CCL15-CCL14A0A0B4J2E2 113 aa6.79□□□□□ -1.32
CKAP4-203ENST00000553039 USP2O75604 605 aaPredicted RBP6.79□□□□□ -1.32
CKAP4-203ENST00000553039 CETPP11597 493 aa6.79□□□□□ -1.32
CKAP4-203ENST00000553039 OSBPP22059 807 aa6.79□□□□□ -1.32
CKAP4-203ENST00000553039 ATP2B4P23634 1241 aa6.79□□□□□ -1.32
CKAP4-203ENST00000553039 PSMC4P43686 418 aa6.79□□□□□ -1.32
CKAP4-203ENST00000553039 CAP1Q01518 475 aa6.79□□□□□ -1.32
CKAP4-203ENST00000553039 MAP3K12Q12852 859 aa6.79□□□□□ -1.32
CKAP4-203ENST00000553039 DLGAP5Q15398 846 aa6.79□□□□□ -1.32
CKAP4-203ENST00000553039 CCL15Q16663 113 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms