RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.76■■□□□ 1.23
PRPF40B-215ENST00000551418 IL1R1P14778 569 aa22.75■■□□□ 1.23
PRPF40B-215ENST00000551418 DLGAP5Q15398 846 aa22.75■■□□□ 1.23
PRPF40B-215ENST00000551418 LDLRAD1Q5T700 205 aa22.75■■□□□ 1.23
PRPF40B-215ENST00000551418 APOBEC3FQ8IUX4 373 aaKnown RBP22.75■■□□□ 1.23
PRPF40B-215ENST00000551418 DEFB129Q9H1M3 183 aa22.75■■□□□ 1.23
PRPF40B-215ENST00000551418 ANGEL1Q9UNK9 670 aaKnown RBP22.75■■□□□ 1.23
PRPF40B-215ENST00000551418 GRM8O00222 908 aa22.74■■□□□ 1.23
PRPF40B-215ENST00000551418 ANP32CO43423 234 aa22.74■■□□□ 1.23
PRPF40B-215ENST00000551418 PRMT6Q96LA8 375 aaPredicted RBP22.74■■□□□ 1.23
PRPF40B-215ENST00000551418 SSC5DA1L4H1 1573 aa22.73■■□□□ 1.23
PRPF40B-215ENST00000551418 CLRN2A0PK11 232 aa22.73■■□□□ 1.23
PRPF40B-215ENST00000551418 MMP14P50281 582 aa22.73■■□□□ 1.23
PRPF40B-215ENST00000551418 CFAP100Q494V2 611 aa22.73■■□□□ 1.23
PRPF40B-215ENST00000551418 LDHAL6AQ6ZMR3 332 aa22.73■■□□□ 1.23
PRPF40B-215ENST00000551418 ARMC9Q7Z3E5 817 aa22.73■■□□□ 1.23
PRPF40B-215ENST00000551418 SPRYD7Q5W111 196 aa22.72■■□□□ 1.23
PRPF40B-215ENST00000551418 FAM9BQ8IZU0 186 aa22.72■■□□□ 1.23
PRPF40B-215ENST00000551418 MTMR14Q8NCE2 650 aa22.72■■□□□ 1.23
PRPF40B-215ENST00000551418 KAZALD1Q96I82 304 aa22.72■■□□□ 1.23
PRPF40B-215ENST00000551418 CLMNQ96JQ2 1002 aa22.72■■□□□ 1.23
PRPF40B-215ENST00000551418 PUS3Q9BZE2 481 aaKnown RBP22.72■■□□□ 1.23
PRPF40B-215ENST00000551418 ECM29Q5VYK3 1845 aa22.71■■□□□ 1.23
PRPF40B-215ENST00000551418 GPR25O00155 361 aa22.71■■□□□ 1.23
PRPF40B-215ENST00000551418 CCDC57Q2TAC2 916 aa22.71■■□□□ 1.23
PRPF40B-215ENST00000551418 SLC4A10Q6U841 1118 aa22.71■■□□□ 1.23
PRPF40B-215ENST00000551418 ZNF804AQ7Z570 1209 aa22.71■■□□□ 1.23
PRPF40B-215ENST00000551418 SUCLG2Q96I99 432 aa22.71■■□□□ 1.23
PRPF40B-215ENST00000551418 HPS5Q9UPZ3 1129 aa22.71■■□□□ 1.23
PRPF40B-215ENST00000551418 CNNM1Q9NRU3 951 aa22.7■■□□□ 1.22
PRPF40B-215ENST00000551418 C9orf78Q9NZ63 289 aaPredicted RBP22.7■■□□□ 1.22
PRPF40B-215ENST00000551418 SPDYE2BA6NHP3 402 aa22.69■■□□□ 1.22
PRPF40B-215ENST00000551418 SPDYE6P0CI01 402 aa22.69■■□□□ 1.22
PRPF40B-215ENST00000551418 GYG1P46976 350 aa22.69■■□□□ 1.22
PRPF40B-215ENST00000551418 TAF7LQ5H9L4 462 aa22.69■■□□□ 1.22
PRPF40B-215ENST00000551418 NBPF12Q5TAG4 269 aaPredicted RBP22.69■■□□□ 1.22
PRPF40B-215ENST00000551418 ZNF316A6NFI3 1004 aaPredicted RBP22.68■■□□□ 1.22
PRPF40B-215ENST00000551418 NBPF7P0C2Y1 421 aaPredicted RBP22.68■■□□□ 1.22
PRPF40B-215ENST00000551418 VEZTQ9HBM0 779 aa22.68■■□□□ 1.22
PRPF40B-215ENST00000551418 PDE4DIPQ5VU43 2346 aa22.67■■□□□ 1.22
PRPF40B-215ENST00000551418 ALDH1L1O75891 902 aa22.67■■□□□ 1.22
PRPF40B-215ENST00000551418 FKBP1AP62942 108 aaKnown RBP22.67■■□□□ 1.22
PRPF40B-215ENST00000551418 TDRD7Q8NHU6 1098 aaKnown RBP22.67■■□□□ 1.22
PRPF40B-215ENST00000551418 SLC10A4Q96EP9 437 aa22.67■■□□□ 1.22
PRPF40B-215ENST00000551418 SRCIN1Q9C0H9 1055 aa22.67■■□□□ 1.22
PRPF40B-215ENST00000551418 FAM205AQ6ZU69 1335 aa22.66■■□□□ 1.22
PRPF40B-215ENST00000551418 SLC34A2O95436 690 aa22.66■■□□□ 1.22
PRPF40B-215ENST00000551418 RBM5P52756 815 aaKnown RBP eCLIP22.66■■□□□ 1.22
PRPF40B-215ENST00000551418 SREBF2Q12772 1141 aa22.66■■□□□ 1.22
PRPF40B-215ENST00000551418 GRIK5Q16478 980 aa22.66■■□□□ 1.22
PRPF40B-215ENST00000551418 MAP3K11Q16584 847 aa22.66■■□□□ 1.22
PRPF40B-215ENST00000551418 FAM84BQ96KN1 310 aaPredicted RBP22.66■■□□□ 1.22
PRPF40B-215ENST00000551418 COL1A1P02452 1464 aaPredicted RBP22.66■■□□□ 1.22
PRPF40B-215ENST00000551418 USP2O75604 605 aaPredicted RBP22.65■■□□□ 1.22
PRPF40B-215ENST00000551418 GJA5P36382 358 aa22.65■■□□□ 1.22
PRPF40B-215ENST00000551418 CDAN1Q8IWY9 1227 aa22.65■■□□□ 1.22
PRPF40B-215ENST00000551418 RIPOR2Q9Y4F9 1068 aa22.65■■□□□ 1.22
PRPF40B-215ENST00000551418 RASA3Q14644 834 aa22.64■■□□□ 1.21
PRPF40B-215ENST00000551418 WNK4Q96J92 1243 aa22.64■■□□□ 1.21
PRPF40B-215ENST00000551418 IGF2BP3O00425 579 aaKnown RBP eCLIP22.63■■□□□ 1.21
PRPF40B-215ENST00000551418 FKTNO75072 461 aa22.63■■□□□ 1.21
PRPF40B-215ENST00000551418 HIBADHP31937 336 aaKnown RBP22.63■■□□□ 1.21
PRPF40B-215ENST00000551418 UBE4AQ14139 1066 aa22.63■■□□□ 1.21
PRPF40B-215ENST00000551418 NOM1Q5C9Z4 860 aaKnown RBP22.63■■□□□ 1.21
PRPF40B-215ENST00000551418 MFSD14BQ5SR56 506 aa22.63■■□□□ 1.21
PRPF40B-215ENST00000551418 IFNL1Q8IU54 200 aa22.63■■□□□ 1.21
PRPF40B-215ENST00000551418 CFHR5Q9BXR6 569 aa22.63■■□□□ 1.21
PRPF40B-215ENST00000551418 TDRD3Q9H7E2 651 aaKnown RBP22.63■■□□□ 1.21
PRPF40B-215ENST00000551418 IQSEC3Q9UPP2 1182 aaPredicted RBP22.63■■□□□ 1.21
PRPF40B-215ENST00000551418 PPP2R3BQ9Y5P8 575 aa22.63■■□□□ 1.21
PRPF40B-215ENST00000551418 ZNF521Q96K83 1311 aa22.62■■□□□ 1.21
PRPF40B-215ENST00000551418 MYO1BO43795 1136 aa22.62■■□□□ 1.21
PRPF40B-215ENST00000551418 PPP1R12BO60237 982 aaPredicted RBP22.62■■□□□ 1.21
PRPF40B-215ENST00000551418 PKN2Q16513 984 aaKnown RBP22.62■■□□□ 1.21
PRPF40B-215ENST00000551418 LRRC24Q50LG9 513 aa22.62■■□□□ 1.21
PRPF40B-215ENST00000551418 MRPL50Q8N5N7 158 aaKnown RBP22.62■■□□□ 1.21
PRPF40B-215ENST00000551418 ANKRD44Q8N8A2 993 aa22.62■■□□□ 1.21
PRPF40B-215ENST00000551418 BICC1Q9H694 974 aaKnown RBP22.62■■□□□ 1.21
PRPF40B-215ENST00000551418 ZNF70Q9UC06 446 aaPredicted RBP22.62■■□□□ 1.21
PRPF40B-215ENST00000551418 TTF2Q9UNY4 1162 aaKnown RBP22.62■■□□□ 1.21
PRPF40B-215ENST00000551418 UTYO14607 1347 aa22.61■■□□□ 1.21
PRPF40B-215ENST00000551418 SUPT20HL1Q3ZLR7 823 aa22.61■■□□□ 1.21
PRPF40B-215ENST00000551418 MANSC4A6NHS7 340 aaPredicted RBP22.6■■□□□ 1.21
PRPF40B-215ENST00000551418 SPDYE2Q495Y8 402 aa22.6■■□□□ 1.21
PRPF40B-215ENST00000551418 KLHDC4Q8TBB5 520 aa22.6■■□□□ 1.21
PRPF40B-215ENST00000551418 OTOFQ9HC10 1997 aa22.59■■□□□ 1.21
PRPF40B-215ENST00000551418 FBXO46Q6PJ61 603 aaPredicted RBP22.59■■□□□ 1.21
PRPF40B-215ENST00000551418 FBXO33Q7Z6M2 555 aa22.59■■□□□ 1.21
PRPF40B-215ENST00000551418 DZIP1LQ8IYY4 767 aaKnown RBP22.59■■□□□ 1.21
PRPF40B-215ENST00000551418 TEPSINQ96N21 525 aa22.59■■□□□ 1.21
PRPF40B-215ENST00000551418 PTPN18Q99952 460 aa22.59■■□□□ 1.21
PRPF40B-215ENST00000551418 LAMB1P07942 1786 aa22.58■■□□□ 1.21
PRPF40B-215ENST00000551418 ZBTB48P10074 688 aaPredicted RBP22.58■■□□□ 1.21
PRPF40B-215ENST00000551418 RABL6Q3YEC7 729 aaPredicted RBP22.58■■□□□ 1.21
PRPF40B-215ENST00000551418 CNKSR2Q8WXI2 1034 aa22.58■■□□□ 1.21
PRPF40B-215ENST00000551418 SERPINA10Q9UK55 444 aa22.58■■□□□ 1.21
PRPF40B-215ENST00000551418 TCP10L2B9ZVM9 353 aa22.57■■□□□ 1.2
PRPF40B-215ENST00000551418 CRKP46108 304 aa22.57■■□□□ 1.2
PRPF40B-215ENST00000551418 IREB2P48200 963 aaKnown RBP22.57■■□□□ 1.2
PRPF40B-215ENST00000551418 INHBEP58166 350 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms