RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 RGMBQ6NW40 437 aa9.15□□□□□ -0.94
SMARCD1-210ENST00000551352 CHD1LQ86WJ1 897 aa9.15□□□□□ -0.94
SMARCD1-210ENST00000551352 USP44Q9H0E7 712 aa9.15□□□□□ -0.94
SMARCD1-210ENST00000551352 DCTPP1Q9H773 170 aa9.15□□□□□ -0.94
SMARCD1-210ENST00000551352 ANKIB1Q9P2G1 1089 aa9.15□□□□□ -0.94
SMARCD1-210ENST00000551352 MINPP1Q9UNW1 487 aa9.15□□□□□ -0.94
SMARCD1-210ENST00000551352 SSC5DA1L4H1 1573 aa9.15□□□□□ -0.95
SMARCD1-210ENST00000551352 MYH13Q9UKX3 1938 aa9.15□□□□□ -0.95
SMARCD1-210ENST00000551352 AOX1Q06278 1338 aa9.14□□□□□ -0.95
SMARCD1-210ENST00000551352 HMMRO75330 724 aa9.14□□□□□ -0.95
SMARCD1-210ENST00000551352 ALDH1L1O75891 902 aa9.14□□□□□ -0.95
SMARCD1-210ENST00000551352 UBTFL1P0CB47 393 aaPredicted RBP9.14□□□□□ -0.95
SMARCD1-210ENST00000551352 RGS19P49795 217 aa9.14□□□□□ -0.95
SMARCD1-210ENST00000551352 NOGQ13253 232 aa9.14□□□□□ -0.95
SMARCD1-210ENST00000551352 NBPF9Q3BBW0 867 aa9.14□□□□□ -0.95
SMARCD1-210ENST00000551352 ANKRD45Q5TZF3 282 aa9.14□□□□□ -0.95
SMARCD1-210ENST00000551352 PRAMEF18Q5VWM3 479 aa9.14□□□□□ -0.95
SMARCD1-210ENST00000551352 RASAL3Q86YV0 1011 aa9.14□□□□□ -0.95
SMARCD1-210ENST00000551352 ANKRD18AQ8IVF6 992 aa9.14□□□□□ -0.95
SMARCD1-210ENST00000551352 AGBL3Q8NEM8 1001 aa9.14□□□□□ -0.95
SMARCD1-210ENST00000551352 ZC3H12CQ9C0D7 883 aaKnown RBP9.14□□□□□ -0.95
SMARCD1-210ENST00000551352 LNPKQ9C0E8 428 aa9.14□□□□□ -0.95
SMARCD1-210ENST00000551352 ZSWIM8A7E2V4 1837 aa9.14□□□□□ -0.95
SMARCD1-210ENST00000551352 PDE4DIPQ5VU43 2346 aa9.14□□□□□ -0.95
SMARCD1-210ENST00000551352 ATP2B4P23634 1241 aa9.13□□□□□ -0.95
SMARCD1-210ENST00000551352 UBE3BQ7Z3V4 1068 aa9.13□□□□□ -0.95
SMARCD1-210ENST00000551352 DCPSQ96C86 337 aaKnown RBP9.13□□□□□ -0.95
SMARCD1-210ENST00000551352 ZBED3Q96IU2 234 aaPredicted RBP9.13□□□□□ -0.95
SMARCD1-210ENST00000551352 CSRNP1Q96S65 589 aa9.13□□□□□ -0.95
SMARCD1-210ENST00000551352 PLA2G12BQ9BX93 195 aa9.13□□□□□ -0.95
SMARCD1-210ENST00000551352 MYOZ2Q9NPC6 264 aa9.13□□□□□ -0.95
SMARCD1-210ENST00000551352 BSDC1Q9NW68 430 aaPredicted RBP9.13□□□□□ -0.95
SMARCD1-210ENST00000551352 RNF186Q9NXI6 227 aa9.13□□□□□ -0.95
SMARCD1-210ENST00000551352 PCDHAC2Q9Y5I4 1007 aa9.13□□□□□ -0.95
SMARCD1-210ENST00000551352 LRRFIP2Q9Y608 721 aaKnown RBP9.13□□□□□ -0.95
SMARCD1-210ENST00000551352 RBBP6Q7Z6E9 1792 aaKnown RBP9.12□□□□□ -0.95
SMARCD1-210ENST00000551352 PITPNM2Q9BZ72 1349 aa9.12□□□□□ -0.95
SMARCD1-210ENST00000551352 USP17L3A6NCW0 530 aa9.12□□□□□ -0.95
SMARCD1-210ENST00000551352 USP17L4A6NCW7 530 aa9.12□□□□□ -0.95
SMARCD1-210ENST00000551352 CCDC85CA6NKD9 419 aa9.12□□□□□ -0.95
SMARCD1-210ENST00000551352 SASH1O94885 1247 aa9.12□□□□□ -0.95
SMARCD1-210ENST00000551352 CSF1RP07333 972 aa9.12□□□□□ -0.95
SMARCD1-210ENST00000551352 ATP8B2P98198 1209 aa9.12□□□□□ -0.95
SMARCD1-210ENST00000551352 DGKZQ13574 1117 aa9.12□□□□□ -0.95
SMARCD1-210ENST00000551352 GCKRQ14397 625 aa9.12□□□□□ -0.95
SMARCD1-210ENST00000551352 EPHA10Q5JZY3 1008 aa9.12□□□□□ -0.95
SMARCD1-210ENST00000551352 USP17L1Q7RTZ2 530 aa9.12□□□□□ -0.95
SMARCD1-210ENST00000551352 CERS5Q8N5B7 392 aa9.12□□□□□ -0.95
SMARCD1-210ENST00000551352 LINS1Q8NG48 757 aa9.12□□□□□ -0.95
SMARCD1-210ENST00000551352 BEGAINQ9BUH8 593 aa9.12□□□□□ -0.95
SMARCD1-210ENST00000551352 FZD1Q9UP38 647 aa9.12□□□□□ -0.95
SMARCD1-210ENST00000551352 WNT10BO00744 389 aa9.11□□□□□ -0.95
SMARCD1-210ENST00000551352 CA12O43570 354 aa9.11□□□□□ -0.95
SMARCD1-210ENST00000551352 TRPA1O75762 1119 aa9.11□□□□□ -0.95
SMARCD1-210ENST00000551352 NBPF7P0C2Y1 421 aaPredicted RBP9.11□□□□□ -0.95
SMARCD1-210ENST00000551352 USP17L8P0C7I0 530 aa9.11□□□□□ -0.95
SMARCD1-210ENST00000551352 ZNF157P51786 506 aaPredicted RBP9.11□□□□□ -0.95
SMARCD1-210ENST00000551352 FOXO4P98177 505 aa9.11□□□□□ -0.95
SMARCD1-210ENST00000551352 PODNQ7Z5L7 613 aa9.11□□□□□ -0.95
SMARCD1-210ENST00000551352 C2orf69Q8N8R5 385 aa9.11□□□□□ -0.95
SMARCD1-210ENST00000551352 UTYO14607 1347 aa9.1□□□□□ -0.95
SMARCD1-210ENST00000551352 PNMA6EA0A0J9YXQ4 647 aa9.1□□□□□ -0.95
SMARCD1-210ENST00000551352 UBE2Q2LH0YL09 131 aa9.1□□□□□ -0.95
SMARCD1-210ENST00000551352 ITGA6P23229 1130 aa9.1□□□□□ -0.95
SMARCD1-210ENST00000551352 ANP32AP39687 249 aaKnown RBP9.1□□□□□ -0.95
SMARCD1-210ENST00000551352 SULF1Q8IWU6 871 aa9.1□□□□□ -0.95
SMARCD1-210ENST00000551352 SSH3Q8TE77 659 aa9.1□□□□□ -0.95
SMARCD1-210ENST00000551352 CDC5LQ99459 802 aaKnown RBP9.1□□□□□ -0.95
SMARCD1-210ENST00000551352 R3HDMLQ9H3Y0 253 aa9.1□□□□□ -0.95
SMARCD1-210ENST00000551352 SAGE1Q9NXZ1 904 aa9.1□□□□□ -0.95
SMARCD1-210ENST00000551352 ZNF804BA4D1E1 1349 aa9.09□□□□□ -0.95
SMARCD1-210ENST00000551352 GRM8O00222 908 aa9.09□□□□□ -0.95
SMARCD1-210ENST00000551352 TAF5LO75529 589 aa9.09□□□□□ -0.95
SMARCD1-210ENST00000551352 CHRNDQ07001 517 aa9.09□□□□□ -0.95
SMARCD1-210ENST00000551352 NEXNQ0ZGT2 675 aa9.09□□□□□ -0.95
SMARCD1-210ENST00000551352 MTX1Q13505 466 aa9.09□□□□□ -0.95
SMARCD1-210ENST00000551352 POLA2Q14181 598 aa9.09□□□□□ -0.95
SMARCD1-210ENST00000551352 BMP2KLQ5H9B9 411 aa9.09□□□□□ -0.95
SMARCD1-210ENST00000551352 STRIP1Q5VSL9 837 aa9.09□□□□□ -0.95
SMARCD1-210ENST00000551352 HELBQ8NG08 1087 aaPredicted RBP9.09□□□□□ -0.95
SMARCD1-210ENST00000551352 CCDC102AQ96A19 550 aa9.09□□□□□ -0.95
SMARCD1-210ENST00000551352 ZNF594Q96JF6 807 aaPredicted RBP9.09□□□□□ -0.95
SMARCD1-210ENST00000551352 C9orf78Q9NZ63 289 aaPredicted RBP9.09□□□□□ -0.95
SMARCD1-210ENST00000551352 ZBTB47Q9UFB7 747 aaPredicted RBP9.09□□□□□ -0.95
SMARCD1-210ENST00000551352 HDAC5Q9UQL6 1122 aa9.09□□□□□ -0.95
SMARCD1-210ENST00000551352 CENPFP49454 3210 aa9.08□□□□□ -0.96
SMARCD1-210ENST00000551352 G3V3G9 751 aa9.08□□□□□ -0.96
SMARCD1-210ENST00000551352 HSP90B1P14625 803 aaKnown RBP9.08□□□□□ -0.96
SMARCD1-210ENST00000551352 DCAF8Q5TAQ9 597 aa9.08□□□□□ -0.96
SMARCD1-210ENST00000551352 KIAA0825Q8IV33 1275 aa9.08□□□□□ -0.96
SMARCD1-210ENST00000551352 PLEKHM2Q8IWE5 1019 aa9.08□□□□□ -0.96
SMARCD1-210ENST00000551352 FBXW7Q969H0 707 aa9.08□□□□□ -0.96
SMARCD1-210ENST00000551352 KAZALD1Q96I82 304 aa9.08□□□□□ -0.96
SMARCD1-210ENST00000551352 COA1Q9GZY4 146 aa9.08□□□□□ -0.96
SMARCD1-210ENST00000551352 CD209Q9NNX6 404 aa9.08□□□□□ -0.96
SMARCD1-210ENST00000551352 EXOC6BQ9Y2D4 811 aa9.08□□□□□ -0.96
SMARCD1-210ENST00000551352 LEMD3Q9Y2U8 911 aa9.08□□□□□ -0.96
SMARCD1-210ENST00000551352 APBB1O00213 710 aa9.07□□□□□ -0.96
SMARCD1-210ENST00000551352 SRGAP3O43295 1099 aa9.07□□□□□ -0.96
SMARCD1-210ENST00000551352 SMARCA5O60264 1052 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms