RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 ZNF594Q96JF6 807 aaPredicted RBP27.51■■□□□ 1.99
SMARCC2-210ENST00000550519 DEFB129Q9H1M3 183 aa27.5■■□□□ 1.99
SMARCC2-210ENST00000550519 C9orf78Q9NZ63 289 aaPredicted RBP27.5■■□□□ 1.99
SMARCC2-210ENST00000550519 COL1A1P02452 1464 aaPredicted RBP27.5■■□□□ 1.99
SMARCC2-210ENST00000550519 PRKG1Q13976 671 aa27.49■■□□□ 1.99
SMARCC2-210ENST00000550519 TBC1D8O95759 1140 aa27.48■■□□□ 1.99
SMARCC2-210ENST00000550519 TAF7LQ5H9L4 462 aa27.48■■□□□ 1.99
SMARCC2-210ENST00000550519 FAM9BQ8IZU0 186 aa27.48■■□□□ 1.99
SMARCC2-210ENST00000550519 CNNM1Q9NRU3 951 aa27.48■■□□□ 1.99
SMARCC2-210ENST00000550519 PCDHAC2Q9Y5I4 1007 aa27.48■■□□□ 1.99
SMARCC2-210ENST00000550519 PLIN1O60240 522 aa27.47■■□□□ 1.99
SMARCC2-210ENST00000550519 MKRN3Q13064 507 aaKnown RBP27.47■■□□□ 1.99
SMARCC2-210ENST00000550519 SLC4A10Q6U841 1118 aa27.47■■□□□ 1.99
SMARCC2-210ENST00000550519 SRCIN1Q9C0H9 1055 aa27.47■■□□□ 1.99
SMARCC2-210ENST00000550519 ANGEL1Q9UNK9 670 aaKnown RBP27.47■■□□□ 1.99
SMARCC2-210ENST00000550519 A0A1B0GUL6 1792 aa27.47■■□□□ 1.99
SMARCC2-210ENST00000550519 SPDYE2BA6NHP3 402 aa27.46■■□□□ 1.99
SMARCC2-210ENST00000550519 F8W031 263 aaPredicted RBP27.46■■□□□ 1.99
SMARCC2-210ENST00000550519 SPDYE6P0CI01 402 aa27.46■■□□□ 1.99
SMARCC2-210ENST00000550519 SREBF2Q12772 1141 aa27.46■■□□□ 1.99
SMARCC2-210ENST00000550519 MAP3K11Q16584 847 aa27.46■■□□□ 1.99
SMARCC2-210ENST00000550519 CFAP100Q494V2 611 aa27.46■■□□□ 1.99
SMARCC2-210ENST00000550519 NOM1Q5C9Z4 860 aaKnown RBP27.46■■□□□ 1.99
SMARCC2-210ENST00000550519 ZNF296Q8WUU4 475 aaPredicted RBP27.46■■□□□ 1.99
SMARCC2-210ENST00000550519 PPP2R3BQ9Y5P8 575 aa27.46■■□□□ 1.99
SMARCC2-210ENST00000550519 SPRYD7Q5W111 196 aa27.45■■□□□ 1.98
SMARCC2-210ENST00000550519 KAZALD1Q96I82 304 aa27.45■■□□□ 1.98
SMARCC2-210ENST00000550519 PRMT6Q96LA8 375 aaPredicted RBP27.45■■□□□ 1.98
SMARCC2-210ENST00000550519 FZD1Q9UP38 647 aa27.45■■□□□ 1.98
SMARCC2-210ENST00000550519 UBE4AQ14139 1066 aa27.44■■□□□ 1.98
SMARCC2-210ENST00000550519 SUCLG2Q96I99 432 aa27.44■■□□□ 1.98
SMARCC2-210ENST00000550519 CFHR5Q9BXR6 569 aa27.44■■□□□ 1.98
SMARCC2-210ENST00000550519 JAG2Q9Y219 1238 aa27.44■■□□□ 1.98
SMARCC2-210ENST00000550519 FAM205AQ6ZU69 1335 aa27.43■■□□□ 1.98
SMARCC2-210ENST00000550519 ZNF521Q96K83 1311 aa27.43■■□□□ 1.98
SMARCC2-210ENST00000550519 GPR25O00155 361 aa27.43■■□□□ 1.98
SMARCC2-210ENST00000550519 MYO1BO43795 1136 aa27.43■■□□□ 1.98
SMARCC2-210ENST00000550519 PKN2Q16513 984 aaKnown RBP27.43■■□□□ 1.98
SMARCC2-210ENST00000550519 TDRD7Q8NHU6 1098 aaKnown RBP27.43■■□□□ 1.98
SMARCC2-210ENST00000550519 SSC5DA1L4H1 1573 aa27.43■■□□□ 1.98
SMARCC2-210ENST00000550519 UTYO14607 1347 aa27.42■■□□□ 1.98
SMARCC2-210ENST00000550519 AOX1Q06278 1338 aa27.42■■□□□ 1.98
SMARCC2-210ENST00000550519 CLRN2A0PK11 232 aa27.42■■□□□ 1.98
SMARCC2-210ENST00000550519 PUS3Q9BZE2 481 aaKnown RBP27.42■■□□□ 1.98
SMARCC2-210ENST00000550519 PPP1R12BO60237 982 aaPredicted RBP27.41■■□□□ 1.98
SMARCC2-210ENST00000550519 NBPF7P0C2Y1 421 aaPredicted RBP27.41■■□□□ 1.98
SMARCC2-210ENST00000550519 SLC10A4Q96EP9 437 aa27.41■■□□□ 1.98
SMARCC2-210ENST00000550519 UNCXA6NJT0 531 aa27.4■■□□□ 1.98
SMARCC2-210ENST00000550519 HIBADHP31937 336 aaKnown RBP27.4■■□□□ 1.98
SMARCC2-210ENST00000550519 SOX10P56693 466 aa27.4■■□□□ 1.98
SMARCC2-210ENST00000550519 SUPT20HL1Q3ZLR7 823 aa27.4■■□□□ 1.98
SMARCC2-210ENST00000550519 FAM84BQ96KN1 310 aaPredicted RBP27.4■■□□□ 1.98
SMARCC2-210ENST00000550519 HPS5Q9UPZ3 1129 aa27.4■■□□□ 1.98
SMARCC2-210ENST00000550519 RIPOR2Q9Y4F9 1068 aa27.4■■□□□ 1.98
SMARCC2-210ENST00000550519 GYG1P46976 350 aa27.39■■□□□ 1.98
SMARCC2-210ENST00000550519 R3HDMLQ9H3Y0 253 aa27.39■■□□□ 1.98
SMARCC2-210ENST00000550519 VEZTQ9HBM0 779 aa27.39■■□□□ 1.98
SMARCC2-210ENST00000550519 RBM5P52756 815 aaKnown RBP eCLIP27.38■■□□□ 1.97
SMARCC2-210ENST00000550519 INHBEP58166 350 aa27.38■■□□□ 1.97
SMARCC2-210ENST00000550519 RABL6Q3YEC7 729 aaPredicted RBP27.38■■□□□ 1.97
SMARCC2-210ENST00000550519 MFSD14BQ5SR56 506 aa27.38■■□□□ 1.97
SMARCC2-210ENST00000550519 NBPF12Q5TAG4 269 aaPredicted RBP27.38■■□□□ 1.97
SMARCC2-210ENST00000550519 CLMNQ96JQ2 1002 aa27.38■■□□□ 1.97
SMARCC2-210ENST00000550519 MANSC4A6NHS7 340 aaPredicted RBP27.37■■□□□ 1.97
SMARCC2-210ENST00000550519 ALDH1A1P00352 501 aa27.37■■□□□ 1.97
SMARCC2-210ENST00000550519 ZBTB48P10074 688 aaPredicted RBP27.37■■□□□ 1.97
SMARCC2-210ENST00000550519 RASA3Q14644 834 aa27.37■■□□□ 1.97
SMARCC2-210ENST00000550519 MRPL50Q8N5N7 158 aaKnown RBP27.37■■□□□ 1.97
SMARCC2-210ENST00000550519 SERPINA10Q9UK55 444 aa27.37■■□□□ 1.97
SMARCC2-210ENST00000550519 TNRC18O15417 2968 aaPredicted RBP27.36■■□□□ 1.97
SMARCC2-210ENST00000550519 WNK4Q96J92 1243 aa27.36■■□□□ 1.97
SMARCC2-210ENST00000550519 BICC1Q9H694 974 aaKnown RBP27.36■■□□□ 1.97
SMARCC2-210ENST00000550519 ECM29Q5VYK3 1845 aa27.36■■□□□ 1.97
SMARCC2-210ENST00000550519 MROH5Q6ZUA9 1318 aa27.36■■□□□ 1.97
SMARCC2-210ENST00000550519 FKTNO75072 461 aa27.35■■□□□ 1.97
SMARCC2-210ENST00000550519 SPDYE2Q495Y8 402 aa27.35■■□□□ 1.97
SMARCC2-210ENST00000550519 TTF2Q9UNY4 1162 aaKnown RBP27.35■■□□□ 1.97
SMARCC2-210ENST00000550519 USP2O75604 605 aaPredicted RBP27.34■■□□□ 1.97
SMARCC2-210ENST00000550519 IFNL1Q8IU54 200 aa27.34■■□□□ 1.97
SMARCC2-210ENST00000550519 ANKRD44Q8N8A2 993 aa27.34■■□□□ 1.97
SMARCC2-210ENST00000550519 ZNF70Q9UC06 446 aaPredicted RBP27.34■■□□□ 1.97
SMARCC2-210ENST00000550519 IREB2P48200 963 aaKnown RBP27.33■■□□□ 1.97
SMARCC2-210ENST00000550519 TNFAIP1Q13829 316 aa27.33■■□□□ 1.97
SMARCC2-210ENST00000550519 FBXO33Q7Z6M2 555 aa27.33■■□□□ 1.97
SMARCC2-210ENST00000550519 SLC34A2O95436 690 aa27.32■■□□□ 1.96
SMARCC2-210ENST00000550519 LRRC24Q50LG9 513 aa27.32■■□□□ 1.96
SMARCC2-210ENST00000550519 FBXO46Q6PJ61 603 aaPredicted RBP27.32■■□□□ 1.96
SMARCC2-210ENST00000550519 DZIP1LQ8IYY4 767 aaKnown RBP27.32■■□□□ 1.96
SMARCC2-210ENST00000550519 TDRD3Q9H7E2 651 aaKnown RBP27.32■■□□□ 1.96
SMARCC2-210ENST00000550519 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.32■■□□□ 1.96
SMARCC2-210ENST00000550519 PTPRCP08575 1304 aa27.32■■□□□ 1.96
SMARCC2-210ENST00000550519 ANKRD13AQ8IZ07 590 aa27.31■■□□□ 1.96
SMARCC2-210ENST00000550519 IGF2BP3O00425 579 aaKnown RBP eCLIP27.3■■□□□ 1.96
SMARCC2-210ENST00000550519 GJA5P36382 358 aa27.3■■□□□ 1.96
SMARCC2-210ENST00000550519 VGLL2Q8N8G2 317 aa27.3■■□□□ 1.96
SMARCC2-210ENST00000550519 PDE4DIPQ5VU43 2346 aa27.3■■□□□ 1.96
SMARCC2-210ENST00000550519 CRKP46108 304 aa27.29■■□□□ 1.96
SMARCC2-210ENST00000550519 GRIK5Q16478 980 aa27.29■■□□□ 1.96
SMARCC2-210ENST00000550519 METTL24Q5JXM2 366 aa27.29■■□□□ 1.96
SMARCC2-210ENST00000550519 VPS37DQ86XT2 251 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms