RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 FPGT-TNNI3KV9GXZ4 949 aa27.79■■■□□ 2.04
BRF1-216ENST00000550208 CHAF1AQ13111 956 aaPredicted RBP27.78■■■□□ 2.04
BRF1-216ENST00000550208 CCDC102BQ68D86 513 aa27.78■■■□□ 2.04
BRF1-216ENST00000550208 ERC1Q8IUD2 1116 aa27.78■■■□□ 2.04
BRF1-216ENST00000550208 SAMD7Q7Z3H4 446 aa27.77■■■□□ 2.04
BRF1-216ENST00000550208 PNMA8AQ86V59 439 aaPredicted RBP27.77■■■□□ 2.04
BRF1-216ENST00000550208 RHPN1Q8TCX5 695 aa27.77■■■□□ 2.04
BRF1-216ENST00000550208 ZNF646O15015 1829 aaPredicted RBP27.76■■■□□ 2.04
BRF1-216ENST00000550208 USP17L8P0C7I0 530 aa27.76■■■□□ 2.03
BRF1-216ENST00000550208 HIRAP54198 1017 aaPredicted RBP27.76■■■□□ 2.03
BRF1-216ENST00000550208 RBM26Q5T8P6 1007 aaKnown RBP27.76■■■□□ 2.03
BRF1-216ENST00000550208 USP50Q70EL3 339 aaPredicted RBP27.76■■■□□ 2.03
BRF1-216ENST00000550208 RBM46Q8TBY0 533 aaKnown RBP27.76■■■□□ 2.03
BRF1-216ENST00000550208 EAF2Q96CJ1 260 aaPredicted RBP27.76■■■□□ 2.03
BRF1-216ENST00000550208 GNL3LQ9NVN8 582 aaKnown RBP27.76■■■□□ 2.03
BRF1-216ENST00000550208 CLEC11AQ9Y240 323 aa27.76■■■□□ 2.03
BRF1-216ENST00000550208 ZNF609O15014 1411 aa27.75■■■□□ 2.03
BRF1-216ENST00000550208 MYO3BQ8WXR4 1341 aa27.75■■■□□ 2.03
BRF1-216ENST00000550208 RAB11FIP3O75154 756 aa27.75■■■□□ 2.03
BRF1-216ENST00000550208 ZNF280AP59817 542 aaPredicted RBP27.75■■■□□ 2.03
BRF1-216ENST00000550208 FKBP1AP62942 108 aaKnown RBP27.75■■■□□ 2.03
BRF1-216ENST00000550208 TBC1D10BQ4KMP7 808 aaPredicted RBP27.75■■■□□ 2.03
BRF1-216ENST00000550208 KIAA0825Q8IV33 1275 aa27.75■■■□□ 2.03
BRF1-216ENST00000550208 TRPM4Q8TD43 1214 aa27.75■■■□□ 2.03
BRF1-216ENST00000550208 CCDC8Q9H0W5 538 aaPredicted RBP27.75■■■□□ 2.03
BRF1-216ENST00000550208 IL1RAPL2Q9NP60 686 aa27.75■■■□□ 2.03
BRF1-216ENST00000550208 EGFRP00533 1210 aa27.74■■■□□ 2.03
BRF1-216ENST00000550208 GORABQ5T7V8 394 aa27.74■■■□□ 2.03
BRF1-216ENST00000550208 DBNDD2Q9BQY9 259 aa27.74■■■□□ 2.03
BRF1-216ENST00000550208 DCTPP1Q9H773 170 aa27.74■■■□□ 2.03
BRF1-216ENST00000550208 AAMPQ13685 434 aa27.73■■■□□ 2.03
BRF1-216ENST00000550208 MFSD14BQ5SR56 506 aa27.73■■■□□ 2.03
BRF1-216ENST00000550208 LDHDQ86WU2 507 aa27.73■■■□□ 2.03
BRF1-216ENST00000550208 KIF1BPQ96EK5 621 aa27.73■■■□□ 2.03
BRF1-216ENST00000550208 F8W031 263 aaPredicted RBP27.72■■■□□ 2.03
BRF1-216ENST00000550208 C1QTNF8P60827 252 aa27.71■■■□□ 2.03
BRF1-216ENST00000550208 GRIK5Q16478 980 aa27.71■■■□□ 2.03
BRF1-216ENST00000550208 CHADLQ6NUI6 762 aa27.71■■■□□ 2.03
BRF1-216ENST00000550208 ARAP2Q8WZ64 1704 aa27.71■■■□□ 2.03
BRF1-216ENST00000550208 BCL11AQ9H165 835 aa27.71■■■□□ 2.03
BRF1-216ENST00000550208 TLR7Q9NYK1 1049 aaKnown RBP27.71■■■□□ 2.03
BRF1-216ENST00000550208 DENND2AQ9ULE3 1009 aa27.71■■■□□ 2.03
BRF1-216ENST00000550208 AACSQ86V21 672 aa27.7■■■□□ 2.02
BRF1-216ENST00000550208 OGFOD1Q8N543 542 aa27.7■■■□□ 2.02
BRF1-216ENST00000550208 SMC1BQ8NDV3 1235 aa27.7■■■□□ 2.02
BRF1-216ENST00000550208 MYOZ2Q9NPC6 264 aa27.7■■■□□ 2.02
BRF1-216ENST00000550208 DBNLQ9UJU6 430 aaKnown RBP27.7■■■□□ 2.02
BRF1-216ENST00000550208 SEMA3EO15041 775 aa27.69■■■□□ 2.02
BRF1-216ENST00000550208 KIF4BQ2VIQ3 1234 aa27.69■■■□□ 2.02
BRF1-216ENST00000550208 TBC1D22AQ8WUA7 517 aa27.69■■■□□ 2.02
BRF1-216ENST00000550208 HDAC9Q9UKV0 1011 aa27.69■■■□□ 2.02
BRF1-216ENST00000550208 ZBTB22O15209 634 aa27.68■■■□□ 2.02
BRF1-216ENST00000550208 SMARCA5O60264 1052 aaPredicted RBP27.68■■■□□ 2.02
BRF1-216ENST00000550208 RASGRF1Q13972 1273 aa27.68■■■□□ 2.02
BRF1-216ENST00000550208 MAP1SQ66K74 1059 aaPredicted RBP27.68■■■□□ 2.02
BRF1-216ENST00000550208 CLASRPQ8N2M8 674 aaKnown RBP27.68■■■□□ 2.02
BRF1-216ENST00000550208 WDR66Q8TBY9 1149 aa27.68■■■□□ 2.02
BRF1-216ENST00000550208 COL1A1P02452 1464 aaPredicted RBP27.68■■■□□ 2.02
BRF1-216ENST00000550208 FSTL1Q12841 308 aa27.67■■■□□ 2.02
BRF1-216ENST00000550208 CCDC158Q5M9N0 1113 aa27.67■■■□□ 2.02
BRF1-216ENST00000550208 PGAP2Q9UHJ9 254 aa27.67■■■□□ 2.02
BRF1-216ENST00000550208 UQCRFS1P1P0C7P4 283 aa27.66■■■□□ 2.02
BRF1-216ENST00000550208 ARID4AP29374 1257 aaPredicted RBP27.66■■■□□ 2.02
BRF1-216ENST00000550208 MMP14P50281 582 aa27.66■■■□□ 2.02
BRF1-216ENST00000550208 SCARF1Q14162 830 aa27.66■■■□□ 2.02
BRF1-216ENST00000550208 TTC39AQ5SRH9 613 aa27.66■■■□□ 2.02
BRF1-216ENST00000550208 LRRCC1Q9C099 1032 aa27.66■■■□□ 2.02
BRF1-216ENST00000550208 HMG20BQ9P0W2 317 aa27.66■■■□□ 2.02
BRF1-216ENST00000550208 TTF2Q9UNY4 1162 aaKnown RBP27.66■■■□□ 2.02
BRF1-216ENST00000550208 ADAMTSL1Q8N6G6 1762 aa27.65■■■□□ 2.02
BRF1-216ENST00000550208 HDAC1Q13547 482 aaPredicted RBP27.65■■■□□ 2.02
BRF1-216ENST00000550208 ZC3H15Q8WU90 426 aaKnown RBP27.65■■■□□ 2.02
BRF1-216ENST00000550208 ASTN2O75129 1339 aaPredicted RBP27.65■■■□□ 2.02
BRF1-216ENST00000550208 PI16Q6UXB8 463 aa27.64■■■□□ 2.02
BRF1-216ENST00000550208 CNTROBQ8N137 903 aa27.64■■■□□ 2.02
BRF1-216ENST00000550208 PCDHAC2Q9Y5I4 1007 aa27.64■■■□□ 2.02
BRF1-216ENST00000550208 IFIT2P09913 472 aaKnown RBP27.63■■■□□ 2.01
BRF1-216ENST00000550208 MCAMP43121 646 aa27.63■■■□□ 2.01
BRF1-216ENST00000550208 NBPF9Q3BBW0 867 aa27.63■■■□□ 2.01
BRF1-216ENST00000550208 SPATA5Q8NB90 893 aa27.63■■■□□ 2.01
BRF1-216ENST00000550208 ITGBL1O95965 494 aaPredicted RBP27.62■■■□□ 2.01
BRF1-216ENST00000550208 CFAP100Q494V2 611 aa27.62■■■□□ 2.01
BRF1-216ENST00000550208 ZBED3Q96IU2 234 aaPredicted RBP27.62■■■□□ 2.01
BRF1-216ENST00000550208 SNRKQ9NRH2 765 aa27.62■■■□□ 2.01
BRF1-216ENST00000550208 MYH13Q9UKX3 1938 aa27.62■■■□□ 2.01
BRF1-216ENST00000550208 PDS5AQ29RF7 1337 aaKnown RBP27.62■■■□□ 2.01
BRF1-216ENST00000550208 WNT10BO00744 389 aa27.61■■■□□ 2.01
BRF1-216ENST00000550208 IGHDP01880 384 aa27.61■■■□□ 2.01
BRF1-216ENST00000550208 DLGAP5Q15398 846 aa27.61■■■□□ 2.01
BRF1-216ENST00000550208 ZNF512BQ96KM6 892 aaPredicted RBP27.61■■■□□ 2.01
BRF1-216ENST00000550208 RWDD1Q9H446 243 aaPredicted RBP27.61■■■□□ 2.01
BRF1-216ENST00000550208 SUGT1Q9Y2Z0 365 aa27.61■■■□□ 2.01
BRF1-216ENST00000550208 SALL1Q9NSC2 1324 aa27.61■■■□□ 2.01
BRF1-216ENST00000550208 RBM5P52756 815 aaKnown RBP eCLIP27.6■■■□□ 2.01
BRF1-216ENST00000550208 MTMR14Q8NCE2 650 aa27.6■■■□□ 2.01
BRF1-216ENST00000550208 PRDX5P30044 214 aa27.59■■■□□ 2.01
BRF1-216ENST00000550208 CRKP46108 304 aa27.59■■■□□ 2.01
BRF1-216ENST00000550208 TBC1D9Q6ZT07 1266 aa27.59■■■□□ 2.01
BRF1-216ENST00000550208 PRMT6Q96LA8 375 aaPredicted RBP27.59■■■□□ 2.01
BRF1-216ENST00000550208 ABCF2Q9UG63 623 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms