RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 ADORA1P30542 326 aa11.83□□□□□ -0.52
RAB5B-205ENST00000549034 AAMPQ13685 434 aa11.83□□□□□ -0.52
RAB5B-205ENST00000549034 RBM26Q5T8P6 1007 aaKnown RBP11.83□□□□□ -0.52
RAB5B-205ENST00000549034 RHPN1Q8TCX5 695 aa11.83□□□□□ -0.52
RAB5B-205ENST00000549034 DPF2Q92785 391 aa11.83□□□□□ -0.52
RAB5B-205ENST00000549034 L3MBTL3Q96JM7 780 aaPredicted RBP11.83□□□□□ -0.52
RAB5B-205ENST00000549034 CCDC8Q9H0W5 538 aaPredicted RBP11.83□□□□□ -0.52
RAB5B-205ENST00000549034 GNL3LQ9NVN8 582 aaKnown RBP11.83□□□□□ -0.52
RAB5B-205ENST00000549034 KIF3CO14782 793 aa11.82□□□□□ -0.52
RAB5B-205ENST00000549034 RPS12P25398 132 aaKnown RBP11.82□□□□□ -0.52
RAB5B-205ENST00000549034 EPHX2P34913 555 aa11.82□□□□□ -0.52
RAB5B-205ENST00000549034 SCNN1DP51172 638 aa11.82□□□□□ -0.52
RAB5B-205ENST00000549034 CHAF1AQ13111 956 aaPredicted RBP11.82□□□□□ -0.52
RAB5B-205ENST00000549034 EAPPQ56P03 285 aaPredicted RBP11.82□□□□□ -0.52
RAB5B-205ENST00000549034 TNNI3KQ59H18 835 aa11.82□□□□□ -0.52
RAB5B-205ENST00000549034 DACT2Q5SW24 774 aa11.82□□□□□ -0.52
RAB5B-205ENST00000549034 AGBL3Q8NEM8 1001 aa11.82□□□□□ -0.52
RAB5B-205ENST00000549034 TAF1DQ9H5J8 278 aaPredicted RBP11.82□□□□□ -0.52
RAB5B-205ENST00000549034 DCTPP1Q9H773 170 aa11.82□□□□□ -0.52
RAB5B-205ENST00000549034 IL1RAPL2Q9NP60 686 aa11.82□□□□□ -0.52
RAB5B-205ENST00000549034 GPR108Q9NPR9 543 aa11.82□□□□□ -0.52
RAB5B-205ENST00000549034 GPRC5DQ9NZD1 345 aa11.82□□□□□ -0.52
RAB5B-205ENST00000549034 CLEC11AQ9Y240 323 aa11.82□□□□□ -0.52
RAB5B-205ENST00000549034 FPGT-TNNI3KV9GXZ4 949 aa11.82□□□□□ -0.52
RAB5B-205ENST00000549034 PHKA1P46020 1223 aa11.81□□□□□ -0.52
RAB5B-205ENST00000549034 CCDC158Q5M9N0 1113 aa11.81□□□□□ -0.52
RAB5B-205ENST00000549034 CCDC102BQ68D86 513 aa11.81□□□□□ -0.52
RAB5B-205ENST00000549034 MICALL2Q8IY33 904 aa11.81□□□□□ -0.52
RAB5B-205ENST00000549034 CLASRPQ8N2M8 674 aaKnown RBP11.81□□□□□ -0.52
RAB5B-205ENST00000549034 KIF1BPQ96EK5 621 aa11.81□□□□□ -0.52
RAB5B-205ENST00000549034 WDR90Q96KV7 1748 aa11.8□□□□□ -0.52
RAB5B-205ENST00000549034 SHTN1A0MZ66 631 aa11.8□□□□□ -0.52
RAB5B-205ENST00000549034 F8W031 263 aaPredicted RBP11.8□□□□□ -0.52
RAB5B-205ENST00000549034 USP17L8P0C7I0 530 aa11.8□□□□□ -0.52
RAB5B-205ENST00000549034 SAMD7Q7Z3H4 446 aa11.8□□□□□ -0.52
RAB5B-205ENST00000549034 AACSQ86V21 672 aa11.8□□□□□ -0.52
RAB5B-205ENST00000549034 PNMA8AQ86V59 439 aaPredicted RBP11.8□□□□□ -0.52
RAB5B-205ENST00000549034 KIAA0825Q8IV33 1275 aa11.8□□□□□ -0.52
RAB5B-205ENST00000549034 OGFOD1Q8N543 542 aa11.8□□□□□ -0.52
RAB5B-205ENST00000549034 EAF2Q96CJ1 260 aaPredicted RBP11.8□□□□□ -0.52
RAB5B-205ENST00000549034 DBNDD2Q9BQY9 259 aa11.8□□□□□ -0.52
RAB5B-205ENST00000549034 RWDD1Q9H446 243 aaPredicted RBP11.8□□□□□ -0.52
RAB5B-205ENST00000549034 ADARB2Q9NS39 739 aaKnown RBP11.8□□□□□ -0.52
RAB5B-205ENST00000549034 SCN4AP35499 1836 aa11.8□□□□□ -0.52
RAB5B-205ENST00000549034 FAM205AQ6ZU69 1335 aa11.8□□□□□ -0.52
RAB5B-205ENST00000549034 SMARCA5O60264 1052 aaPredicted RBP11.79□□□□□ -0.52
RAB5B-205ENST00000549034 TOMM70O94826 608 aa11.79□□□□□ -0.52
RAB5B-205ENST00000549034 IFIT2P09913 472 aaKnown RBP11.79□□□□□ -0.52
RAB5B-205ENST00000549034 TBC1D10BQ4KMP7 808 aaPredicted RBP11.79□□□□□ -0.52
RAB5B-205ENST00000549034 MFSD14BQ5SR56 506 aa11.79□□□□□ -0.52
RAB5B-205ENST00000549034 TTC39AQ5SRH9 613 aa11.79□□□□□ -0.52
RAB5B-205ENST00000549034 USP50Q70EL3 339 aaPredicted RBP11.79□□□□□ -0.52
RAB5B-205ENST00000549034 GMLQ99445 158 aa11.79□□□□□ -0.52
RAB5B-205ENST00000549034 LRRCC1Q9C099 1032 aa11.79□□□□□ -0.52
RAB5B-205ENST00000549034 HDAC9Q9UKV0 1011 aa11.79□□□□□ -0.52
RAB5B-205ENST00000549034 DENND2AQ9ULE3 1009 aa11.79□□□□□ -0.52
RAB5B-205ENST00000549034 MYO3BQ8WXR4 1341 aa11.79□□□□□ -0.52
RAB5B-205ENST00000549034 UQCRFS1P1P0C7P4 283 aa11.78□□□□□ -0.52
RAB5B-205ENST00000549034 FKBP1AP62942 108 aaKnown RBP11.78□□□□□ -0.52
RAB5B-205ENST00000549034 HDAC1Q13547 482 aaPredicted RBP11.78□□□□□ -0.52
RAB5B-205ENST00000549034 CERS5Q8N5B7 392 aa11.78□□□□□ -0.52
RAB5B-205ENST00000549034 WDR66Q8TBY9 1149 aa11.78□□□□□ -0.52
RAB5B-205ENST00000549034 TBC1D22AQ8WUA7 517 aa11.78□□□□□ -0.52
RAB5B-205ENST00000549034 ZBTB47Q9UFB7 747 aaPredicted RBP11.78□□□□□ -0.52
RAB5B-205ENST00000549034 PSME4Q14997 1843 aa11.78□□□□□ -0.52
RAB5B-205ENST00000549034 SEMA3EO15041 775 aa11.77□□□□□ -0.53
RAB5B-205ENST00000549034 IGHDP01880 384 aa11.77□□□□□ -0.53
RAB5B-205ENST00000549034 POTEIP0CG38 1075 aa11.77□□□□□ -0.53
RAB5B-205ENST00000549034 POTEJP0CG39 1038 aa11.77□□□□□ -0.53
RAB5B-205ENST00000549034 RBM5P52756 815 aaKnown RBP eCLIP11.77□□□□□ -0.53
RAB5B-205ENST00000549034 HIRAP54198 1017 aaPredicted RBP11.77□□□□□ -0.53
RAB5B-205ENST00000549034 ANKRD45Q5TZF3 282 aa11.77□□□□□ -0.53
RAB5B-205ENST00000549034 MYOZ2Q9NPC6 264 aa11.77□□□□□ -0.53
RAB5B-205ENST00000549034 TLR7Q9NYK1 1049 aaKnown RBP11.77□□□□□ -0.53
RAB5B-205ENST00000549034 DBNLQ9UJU6 430 aaKnown RBP11.77□□□□□ -0.53
RAB5B-205ENST00000549034 TTF2Q9UNY4 1162 aaKnown RBP11.77□□□□□ -0.53
RAB5B-205ENST00000549034 POLR2AP24928 1970 aaKnown RBP11.77□□□□□ -0.53
RAB5B-205ENST00000549034 MMP14P50281 582 aa11.76□□□□□ -0.53
RAB5B-205ENST00000549034 ZNF280AP59817 542 aaPredicted RBP11.76□□□□□ -0.53
RAB5B-205ENST00000549034 RASGRF1Q13972 1273 aa11.76□□□□□ -0.53
RAB5B-205ENST00000549034 KIF4BQ2VIQ3 1234 aa11.76□□□□□ -0.53
RAB5B-205ENST00000549034 CHADLQ6NUI6 762 aa11.76□□□□□ -0.53
RAB5B-205ENST00000549034 LDHDQ86WU2 507 aa11.76□□□□□ -0.53
RAB5B-205ENST00000549034 SPATA5Q8NB90 893 aa11.76□□□□□ -0.53
RAB5B-205ENST00000549034 SMC1BQ8NDV3 1235 aa11.76□□□□□ -0.53
RAB5B-205ENST00000549034 RBM46Q8TBY0 533 aaKnown RBP11.76□□□□□ -0.53
RAB5B-205ENST00000549034 TRPM4Q8TD43 1214 aa11.76□□□□□ -0.53
RAB5B-205ENST00000549034 GCC1Q96CN9 775 aa11.76□□□□□ -0.53
RAB5B-205ENST00000549034 SNRKQ9NRH2 765 aa11.76□□□□□ -0.53
RAB5B-205ENST00000549034 HMG20BQ9P0W2 317 aa11.76□□□□□ -0.53
RAB5B-205ENST00000549034 ABCF2Q9UG63 623 aa11.76□□□□□ -0.53
RAB5B-205ENST00000549034 ZNF609O15014 1411 aa11.76□□□□□ -0.53
RAB5B-205ENST00000549034 MYH13Q9UKX3 1938 aa11.76□□□□□ -0.53
RAB5B-205ENST00000549034 EGFRP00533 1210 aa11.75□□□□□ -0.53
RAB5B-205ENST00000549034 ARID4AP29374 1257 aaPredicted RBP11.75□□□□□ -0.53
RAB5B-205ENST00000549034 SCARF1Q14162 830 aa11.75□□□□□ -0.53
RAB5B-205ENST00000549034 DLGAP5Q15398 846 aa11.75□□□□□ -0.53
RAB5B-205ENST00000549034 GRIK5Q16478 980 aa11.75□□□□□ -0.53
RAB5B-205ENST00000549034 B4GALNT3Q6L9W6 998 aa11.75□□□□□ -0.53
RAB5B-205ENST00000549034 SPDYE2BA6NHP3 402 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms