RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 IRS4O14654 1257 aaPredicted RBP10.93□□□□□ -0.66
TROAP-208ENST00000548817 MYCP01106 439 aaPredicted RBP10.93□□□□□ -0.66
TROAP-208ENST00000548817 BMP8BP34820 402 aa10.93□□□□□ -0.66
TROAP-208ENST00000548817 TRIM28Q13263 835 aaKnown RBP10.93□□□□□ -0.66
TROAP-208ENST00000548817 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.93□□□□□ -0.66
TROAP-208ENST00000548817 TRIM35Q9UPQ4 493 aa10.93□□□□□ -0.66
TROAP-208ENST00000548817 ZNF804BA4D1E1 1349 aa10.92□□□□□ -0.66
TROAP-208ENST00000548817 GJA5P36382 358 aa10.92□□□□□ -0.66
TROAP-208ENST00000548817 LACTBP83111 547 aaPredicted RBP10.92□□□□□ -0.66
TROAP-208ENST00000548817 HELBQ8NG08 1087 aaPredicted RBP10.92□□□□□ -0.66
TROAP-208ENST00000548817 MS4A4AQ96JQ5 239 aa10.92□□□□□ -0.66
TROAP-208ENST00000548817 MTMR10Q9NXD2 777 aa10.92□□□□□ -0.66
TROAP-208ENST00000548817 ADAMTS8Q9UP79 889 aa10.92□□□□□ -0.66
TROAP-208ENST00000548817 TTC28Q96AY4 2481 aa10.91□□□□□ -0.66
TROAP-208ENST00000548817 EVI5O60447 810 aa10.91□□□□□ -0.66
TROAP-208ENST00000548817 FARP2O94887 1054 aaPredicted RBP10.91□□□□□ -0.66
TROAP-208ENST00000548817 DDX58O95786 925 aaKnown RBP10.91□□□□□ -0.66
TROAP-208ENST00000548817 GTF2A2P52657 109 aa10.91□□□□□ -0.66
TROAP-208ENST00000548817 GNAI1P63096 354 aa10.91□□□□□ -0.66
TROAP-208ENST00000548817 LRIT3Q3SXY7 679 aa10.91□□□□□ -0.66
TROAP-208ENST00000548817 CCDC152Q4G0S7 254 aa10.91□□□□□ -0.66
TROAP-208ENST00000548817 MTMR14Q8NCE2 650 aa10.91□□□□□ -0.66
TROAP-208ENST00000548817 BRI3BPQ8WY22 251 aa10.91□□□□□ -0.66
TROAP-208ENST00000548817 COA1Q9GZY4 146 aa10.91□□□□□ -0.66
TROAP-208ENST00000548817 PRDM6Q9NQX0 595 aa10.91□□□□□ -0.66
TROAP-208ENST00000548817 FZD1Q9UP38 647 aa10.91□□□□□ -0.66
TROAP-208ENST00000548817 OTOFQ9HC10 1997 aa10.9□□□□□ -0.66
TROAP-208ENST00000548817 VCANP13611 3396 aa10.9□□□□□ -0.66
TROAP-208ENST00000548817 TLR2O60603 784 aa10.9□□□□□ -0.66
TROAP-208ENST00000548817 MTFR1Q15390 333 aa10.9□□□□□ -0.66
TROAP-208ENST00000548817 DLGAP5Q15398 846 aa10.9□□□□□ -0.66
TROAP-208ENST00000548817 ZBTB38Q8NAP3 1195 aaPredicted RBP10.9□□□□□ -0.66
TROAP-208ENST00000548817 OPTNQ96CV9 577 aa10.9□□□□□ -0.66
TROAP-208ENST00000548817 MYD88Q99836 296 aa10.9□□□□□ -0.66
TROAP-208ENST00000548817 SEC31BQ9NQW1 1179 aa10.9□□□□□ -0.66
TROAP-208ENST00000548817 MBIPQ9NS73 344 aa10.9□□□□□ -0.66
TROAP-208ENST00000548817 IFT57Q9NWB7 429 aa10.9□□□□□ -0.66
TROAP-208ENST00000548817 CCL15-CCL14A0A0B4J2E2 113 aa10.89□□□□□ -0.67
TROAP-208ENST00000548817 ELL2O00472 640 aaPredicted RBP10.89□□□□□ -0.67
TROAP-208ENST00000548817 MYO1BO43795 1136 aa10.89□□□□□ -0.67
TROAP-208ENST00000548817 USP2O75604 605 aaPredicted RBP10.89□□□□□ -0.67
TROAP-208ENST00000548817 CCL5P13501 91 aa10.89□□□□□ -0.67
TROAP-208ENST00000548817 HOXD10P28358 340 aa10.89□□□□□ -0.67
TROAP-208ENST00000548817 CCL15Q16663 113 aa10.89□□□□□ -0.67
TROAP-208ENST00000548817 KIAA0825Q8IV33 1275 aa10.89□□□□□ -0.67
TROAP-208ENST00000548817 ANKRD18AQ8IVF6 992 aa10.89□□□□□ -0.67
TROAP-208ENST00000548817 CCDC191Q8NCU4 936 aa10.89□□□□□ -0.67
TROAP-208ENST00000548817 GDF15Q99988 308 aa10.89□□□□□ -0.67
TROAP-208ENST00000548817 MXD3Q9BW11 206 aa10.89□□□□□ -0.67
TROAP-208ENST00000548817 CWC25Q9NXE8 425 aaPredicted RBP10.89□□□□□ -0.67
TROAP-208ENST00000548817 STAP2Q9UGK3 403 aa10.89□□□□□ -0.67
TROAP-208ENST00000548817 SRRDQ9UH36 339 aa10.89□□□□□ -0.67
TROAP-208ENST00000548817 APAF1O14727 1248 aa10.88□□□□□ -0.67
TROAP-208ENST00000548817 PDE8AO60658 829 aa10.88□□□□□ -0.67
TROAP-208ENST00000548817 PCCAP05165 728 aaPredicted RBP10.88□□□□□ -0.67
TROAP-208ENST00000548817 GRK4P32298 578 aa10.88□□□□□ -0.67
TROAP-208ENST00000548817 UBXN2AP68543 259 aa10.88□□□□□ -0.67
TROAP-208ENST00000548817 CCDC30Q5VVM6 783 aa10.88□□□□□ -0.67
TROAP-208ENST00000548817 TTLL5Q6EMB2 1281 aa10.88□□□□□ -0.67
TROAP-208ENST00000548817 U2AF1L4Q8WU68 220 aaKnown RBP10.88□□□□□ -0.67
TROAP-208ENST00000548817 TRIM47Q96LD4 638 aa10.88□□□□□ -0.67
TROAP-208ENST00000548817 PHAXQ9H814 394 aaKnown RBP10.88□□□□□ -0.67
TROAP-208ENST00000548817 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.88□□□□□ -0.67
TROAP-208ENST00000548817 ZSWIM8A7E2V4 1837 aa10.88□□□□□ -0.67
TROAP-208ENST00000548817 SPTBN5Q9NRC6 3674 aaKnown RBP10.87□□□□□ -0.67
TROAP-208ENST00000548817 ZNF853P0CG23 659 aa10.87□□□□□ -0.67
TROAP-208ENST00000548817 NEXNQ0ZGT2 675 aa10.87□□□□□ -0.67
TROAP-208ENST00000548817 NBPF12Q5TAG4 269 aaPredicted RBP10.87□□□□□ -0.67
TROAP-208ENST00000548817 FAM43AQ8N2R8 423 aa10.87□□□□□ -0.67
TROAP-208ENST00000548817 RAET1EQ8TD07 263 aa10.87□□□□□ -0.67
TROAP-208ENST00000548817 FBXW7Q969H0 707 aa10.87□□□□□ -0.67
TROAP-208ENST00000548817 CDC5LQ99459 802 aaKnown RBP10.87□□□□□ -0.67
TROAP-208ENST00000548817 ARHGAP39Q9C0H5 1083 aa10.87□□□□□ -0.67
TROAP-208ENST00000548817 RNF208Q9H0X6 261 aa10.87□□□□□ -0.67
TROAP-208ENST00000548817 ELP3Q9H9T3 547 aa10.87□□□□□ -0.67
TROAP-208ENST00000548817 RIPOR2Q9Y4F9 1068 aa10.87□□□□□ -0.67
TROAP-208ENST00000548817 RPTORQ8N122 1335 aa10.86□□□□□ -0.67
TROAP-208ENST00000548817 SGPL1O95470 568 aa10.86□□□□□ -0.67
TROAP-208ENST00000548817 CETPP11597 493 aa10.86□□□□□ -0.67
TROAP-208ENST00000548817 CCT4P50991 539 aaKnown RBP10.86□□□□□ -0.67
TROAP-208ENST00000548817 TNFAIP1Q13829 316 aa10.86□□□□□ -0.67
TROAP-208ENST00000548817 Q7L0L9 218 aa10.86□□□□□ -0.67
TROAP-208ENST00000548817 CCDC85AQ96PX6 553 aaPredicted RBP10.86□□□□□ -0.67
TROAP-208ENST00000548817 METTL22Q9BUU2 404 aaPredicted RBP10.86□□□□□ -0.67
TROAP-208ENST00000548817 STK31Q9BXU1 1019 aa10.86□□□□□ -0.67
TROAP-208ENST00000548817 LEMD3Q9Y2U8 911 aa10.86□□□□□ -0.67
TROAP-208ENST00000548817 SPDYE2BA6NHP3 402 aa10.85□□□□□ -0.67
TROAP-208ENST00000548817 SPDYE6P0CI01 402 aa10.85□□□□□ -0.67
TROAP-208ENST00000548817 RASA3Q14644 834 aa10.85□□□□□ -0.67
TROAP-208ENST00000548817 FAM109BQ6ICB4 259 aaPredicted RBP10.85□□□□□ -0.67
TROAP-208ENST00000548817 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.85□□□□□ -0.67
TROAP-208ENST00000548817 TDHQ8IZJ6 230 aa10.85□□□□□ -0.67
TROAP-208ENST00000548817 SLAIN1Q8ND83 568 aa10.85□□□□□ -0.67
TROAP-208ENST00000548817 JARID2Q92833 1246 aaPredicted RBP10.85□□□□□ -0.67
TROAP-208ENST00000548817 PRKRIP1Q9H875 184 aaPredicted RBP10.85□□□□□ -0.67
TROAP-208ENST00000548817 BSDC1Q9NW68 430 aaPredicted RBP10.85□□□□□ -0.67
TROAP-208ENST00000548817 FAM205AQ6ZU69 1335 aa10.84□□□□□ -0.67
TROAP-208ENST00000548817 MYPNQ86TC9 1320 aa10.84□□□□□ -0.67
TROAP-208ENST00000548817 SPDYE5A6NIY4 337 aa10.84□□□□□ -0.67
TROAP-208ENST00000548817 OSBPP22059 807 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms