RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 NBPF9Q3BBW0 867 aa19.64■□□□□ 0.73
DDX54-205ENST00000548786 CDC37L1Q7L3B6 337 aa19.64■□□□□ 0.73
DDX54-205ENST00000548786 TRPM7Q96QT4 1865 aa19.63■□□□□ 0.73
DDX54-205ENST00000548786 PNMA6EA0A0J9YXQ4 647 aa19.63■□□□□ 0.73
DDX54-205ENST00000548786 FRAT2O75474 233 aaPredicted RBP19.63■□□□□ 0.73
DDX54-205ENST00000548786 CIAO1O76071 339 aa19.63■□□□□ 0.73
DDX54-205ENST00000548786 CAVIN4Q5BKX8 364 aa19.63■□□□□ 0.73
DDX54-205ENST00000548786 CST9Q5W186 159 aa19.63■□□□□ 0.73
DDX54-205ENST00000548786 TDRD7Q8NHU6 1098 aaKnown RBP19.63■□□□□ 0.73
DDX54-205ENST00000548786 CEP126Q9P2H0 1117 aa19.63■□□□□ 0.73
DDX54-205ENST00000548786 POLR2AP24928 1970 aaKnown RBP19.63■□□□□ 0.73
DDX54-205ENST00000548786 IFIT1P09914 478 aaKnown RBP19.62■□□□□ 0.73
DDX54-205ENST00000548786 SLC5A1P13866 664 aa19.62■□□□□ 0.73
DDX54-205ENST00000548786 GRM1Q13255 1194 aa19.62■□□□□ 0.73
DDX54-205ENST00000548786 PAXIP1Q6ZW49 1069 aaPredicted RBP19.62■□□□□ 0.73
DDX54-205ENST00000548786 HDAC9Q9UKV0 1011 aa19.62■□□□□ 0.73
DDX54-205ENST00000548786 PCNTO95613 3336 aa19.62■□□□□ 0.73
DDX54-205ENST00000548786 FGFR2P21802 821 aa19.61■□□□□ 0.73
DDX54-205ENST00000548786 IL15P40933 162 aaPredicted RBP19.61■□□□□ 0.73
DDX54-205ENST00000548786 MTX1Q13505 466 aa19.61■□□□□ 0.73
DDX54-205ENST00000548786 ATP2B3Q16720 1220 aa19.61■□□□□ 0.73
DDX54-205ENST00000548786 MFSD14BQ5SR56 506 aa19.61■□□□□ 0.73
DDX54-205ENST00000548786 FBXO33Q7Z6M2 555 aa19.61■□□□□ 0.73
DDX54-205ENST00000548786 SULF1Q8IWU6 871 aa19.61■□□□□ 0.73
DDX54-205ENST00000548786 COPRSQ9NQ92 184 aa19.61■□□□□ 0.73
DDX54-205ENST00000548786 PCDHAC2Q9Y5I4 1007 aa19.61■□□□□ 0.73
DDX54-205ENST00000548786 CNTNAP1P78357 1384 aa19.6■□□□□ 0.73
DDX54-205ENST00000548786 LPIN2Q92539 896 aa19.6■□□□□ 0.73
DDX54-205ENST00000548786 WNT10BO00744 389 aa19.59■□□□□ 0.73
DDX54-205ENST00000548786 TFCP2Q12800 502 aa19.59■□□□□ 0.73
DDX54-205ENST00000548786 FBXO3Q9UK99 471 aa19.59■□□□□ 0.73
DDX54-205ENST00000548786 FAM205AQ6ZU69 1335 aa19.58■□□□□ 0.73
DDX54-205ENST00000548786 ZBTB7BO15156 539 aaPredicted RBP19.58■□□□□ 0.72
DDX54-205ENST00000548786 ADORA1P30542 326 aa19.58■□□□□ 0.72
DDX54-205ENST00000548786 VEGFBP49765 207 aa19.58■□□□□ 0.72
DDX54-205ENST00000548786 RBM5P52756 815 aaKnown RBP eCLIP19.58■□□□□ 0.72
DDX54-205ENST00000548786 GRIK5Q16478 980 aa19.58■□□□□ 0.72
DDX54-205ENST00000548786 PRAMEF18Q5VWM3 479 aa19.58■□□□□ 0.72
DDX54-205ENST00000548786 DLGAP5Q15398 846 aa19.57■□□□□ 0.72
DDX54-205ENST00000548786 DEFB115Q30KQ5 88 aa19.57■□□□□ 0.72
DDX54-205ENST00000548786 CDCA5Q96FF9 252 aa19.57■□□□□ 0.72
DDX54-205ENST00000548786 COG6Q9Y2V7 657 aa19.57■□□□□ 0.72
DDX54-205ENST00000548786 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.57■□□□□ 0.72
DDX54-205ENST00000548786 ARAP2Q8WZ64 1704 aa19.56■□□□□ 0.72
DDX54-205ENST00000548786 TIMM10P62072 90 aa19.56■□□□□ 0.72
DDX54-205ENST00000548786 FKBP1AP62942 108 aaKnown RBP19.56■□□□□ 0.72
DDX54-205ENST00000548786 CFAP100Q494V2 611 aa19.56■□□□□ 0.72
DDX54-205ENST00000548786 CYP4F22Q6NT55 531 aa19.56■□□□□ 0.72
DDX54-205ENST00000548786 JMYQ8N9B5 988 aa19.56■□□□□ 0.72
DDX54-205ENST00000548786 TTF2Q9UNY4 1162 aaKnown RBP19.56■□□□□ 0.72
DDX54-205ENST00000548786 TLL2Q9Y6L7 1015 aa19.56■□□□□ 0.72
DDX54-205ENST00000548786 AOX1Q06278 1338 aa19.55■□□□□ 0.72
DDX54-205ENST00000548786 COL1A1P02452 1464 aaPredicted RBP19.55■□□□□ 0.72
DDX54-205ENST00000548786 MYH13Q9UKX3 1938 aa19.55■□□□□ 0.72
DDX54-205ENST00000548786 CLRN2A0PK11 232 aa19.55■□□□□ 0.72
DDX54-205ENST00000548786 RASSF10A6NK89 507 aa19.55■□□□□ 0.72
DDX54-205ENST00000548786 PHKA1P46020 1223 aa19.55■□□□□ 0.72
DDX54-205ENST00000548786 G3BP1Q13283 466 aaKnown RBP eCLIP19.55■□□□□ 0.725e-7■■■■□ 20
DDX54-205ENST00000548786 OS9Q13438 667 aaPredicted RBP19.55■□□□□ 0.72
DDX54-205ENST00000548786 C20orf194Q5TEA3 1177 aa19.55■□□□□ 0.72
DDX54-205ENST00000548786 MS4A1P11836 297 aa19.54■□□□□ 0.72
DDX54-205ENST00000548786 ATP8B2P98198 1209 aa19.54■□□□□ 0.72
DDX54-205ENST00000548786 SAPCD2Q86UD0 394 aa19.54■□□□□ 0.72
DDX54-205ENST00000548786 NEUROD6Q96NK8 337 aa19.54■□□□□ 0.72
DDX54-205ENST00000548786 PITPNM2Q9BZ72 1349 aa19.53■□□□□ 0.72
DDX54-205ENST00000548786 A0A1B0GUL7 405 aa19.53■□□□□ 0.72
DDX54-205ENST00000548786 POLA2Q14181 598 aa19.53■□□□□ 0.72
DDX54-205ENST00000548786 MVPQ14764 893 aaKnown RBP19.53■□□□□ 0.72
DDX54-205ENST00000548786 ZBED3Q96IU2 234 aaPredicted RBP19.53■□□□□ 0.72
DDX54-205ENST00000548786 PRMT6Q96LA8 375 aaPredicted RBP19.53■□□□□ 0.72
DDX54-205ENST00000548786 VEZTQ9HBM0 779 aa19.53■□□□□ 0.72
DDX54-205ENST00000548786 GBA2Q9HCG7 927 aaPredicted RBP19.53■□□□□ 0.72
DDX54-205ENST00000548786 WDR33Q9C0J8 1336 aaKnown RBP19.52■□□□□ 0.72
DDX54-205ENST00000548786 SPDYE2BA6NHP3 402 aa19.52■□□□□ 0.72
DDX54-205ENST00000548786 SURF6O75683 361 aaKnown RBP19.52■□□□□ 0.72
DDX54-205ENST00000548786 SPDYE6P0CI01 402 aa19.52■□□□□ 0.72
DDX54-205ENST00000548786 HUNKP57058 714 aa19.52■□□□□ 0.72
DDX54-205ENST00000548786 CEP85Q6P2H3 762 aa19.52■□□□□ 0.72
DDX54-205ENST00000548786 SSH3Q8TE77 659 aa19.52■□□□□ 0.72
DDX54-205ENST00000548786 CAPNS2Q96L46 248 aa19.52■□□□□ 0.72
DDX54-205ENST00000548786 GNL3LQ9NVN8 582 aaKnown RBP19.52■□□□□ 0.72
DDX54-205ENST00000548786 CRKP46108 304 aa19.51■□□□□ 0.71
DDX54-205ENST00000548786 MMP14P50281 582 aa19.51■□□□□ 0.71
DDX54-205ENST00000548786 CCDC102BQ68D86 513 aa19.51■□□□□ 0.71
DDX54-205ENST00000548786 C2orf69Q8N8R5 385 aa19.51■□□□□ 0.71
DDX54-205ENST00000548786 TBC1D22AQ8WUA7 517 aa19.51■□□□□ 0.71
DDX54-205ENST00000548786 XAGE2Q96GT9 111 aa19.51■□□□□ 0.71
DDX54-205ENST00000548786 AKAP2Q9Y2D5 859 aa19.51■□□□□ 0.71
DDX54-205ENST00000548786 MYO1BO43795 1136 aa19.5■□□□□ 0.71
DDX54-205ENST00000548786 AOC2O75106 756 aa19.5■□□□□ 0.71
DDX54-205ENST00000548786 HSPA1AP0DMV8 641 aaKnown RBP19.5■□□□□ 0.71
DDX54-205ENST00000548786 HSPA1BP0DMV9 641 aaKnown RBP19.5■□□□□ 0.71
DDX54-205ENST00000548786 MOB2Q70IA6 237 aa19.5■□□□□ 0.71
DDX54-205ENST00000548786 APOBEC3FQ8IUX4 373 aaKnown RBP19.5■□□□□ 0.71
DDX54-205ENST00000548786 MTMR14Q8NCE2 650 aa19.5■□□□□ 0.71
DDX54-205ENST00000548786 PRKG1Q13976 671 aa19.49■□□□□ 0.71
DDX54-205ENST00000548786 TTLL12Q14166 644 aaPredicted RBP19.49■□□□□ 0.71
DDX54-205ENST00000548786 GORABQ5T7V8 394 aa19.49■□□□□ 0.71
DDX54-205ENST00000548786 TDRD3Q9H7E2 651 aaKnown RBP19.49■□□□□ 0.71
DDX54-205ENST00000548786 SERPINA10Q9UK55 444 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms