RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 SNAP23O00161 211 aa14.27□□□□□ -0.13
BEST3-209ENST00000548658 WNT10BO00744 389 aa14.27□□□□□ -0.13
BEST3-209ENST00000548658 FOXN1O15353 648 aa14.27□□□□□ -0.13
BEST3-209ENST00000548658 IPO8O15397 1037 aaKnown RBP14.27□□□□□ -0.13
BEST3-209ENST00000548658 NOGQ13253 232 aa14.27□□□□□ -0.13
BEST3-209ENST00000548658 KIAA0825Q8IV33 1275 aa14.27□□□□□ -0.13
BEST3-209ENST00000548658 ANKRD44Q8N8A2 993 aa14.27□□□□□ -0.13
BEST3-209ENST00000548658 CCDC102AQ96A19 550 aa14.27□□□□□ -0.13
BEST3-209ENST00000548658 MXD3Q9BW11 206 aa14.27□□□□□ -0.13
BEST3-209ENST00000548658 CA12O43570 354 aa14.26□□□□□ -0.13
BEST3-209ENST00000548658 UBTFL1P0CB47 393 aaPredicted RBP14.26□□□□□ -0.13
BEST3-209ENST00000548658 HIBADHP31937 336 aaKnown RBP14.26□□□□□ -0.13
BEST3-209ENST00000548658 RARSP54136 660 aaKnown RBP14.26□□□□□ -0.13
BEST3-209ENST00000548658 NBPF9Q3BBW0 867 aa14.26□□□□□ -0.13
BEST3-209ENST00000548658 METTL24Q5JXM2 366 aa14.26□□□□□ -0.13
BEST3-209ENST00000548658 VPS37DQ86XT2 251 aa14.26□□□□□ -0.13
BEST3-209ENST00000548658 TNS4Q8IZW8 715 aa14.26□□□□□ -0.13
BEST3-209ENST00000548658 CDCA5Q96FF9 252 aa14.26□□□□□ -0.13
BEST3-209ENST00000548658 PUS3Q9BZE2 481 aaKnown RBP14.26□□□□□ -0.13
BEST3-209ENST00000548658 ASTN2O75129 1339 aaPredicted RBP14.25□□□□□ -0.13
BEST3-209ENST00000548658 MYO1BO43795 1136 aa14.25□□□□□ -0.13
BEST3-209ENST00000548658 PDE8BO95263 885 aa14.25□□□□□ -0.13
BEST3-209ENST00000548658 NF2P35240 595 aa14.25□□□□□ -0.13
BEST3-209ENST00000548658 DLGAP5Q15398 846 aa14.25□□□□□ -0.13
BEST3-209ENST00000548658 CAVIN4Q5BKX8 364 aa14.25□□□□□ -0.13
BEST3-209ENST00000548658 RGMBQ6NW40 437 aa14.25□□□□□ -0.13
BEST3-209ENST00000548658 APOBEC3FQ8IUX4 373 aaKnown RBP14.25□□□□□ -0.13
BEST3-209ENST00000548658 MIER1Q8N108 512 aa14.25□□□□□ -0.13
BEST3-209ENST00000548658 TDRD7Q8NHU6 1098 aaKnown RBP14.25□□□□□ -0.13
BEST3-209ENST00000548658 FBXO3Q9UK99 471 aa14.25□□□□□ -0.13
BEST3-209ENST00000548658 FAM205AQ6ZU69 1335 aa14.24□□□□□ -0.13
BEST3-209ENST00000548658 DLK2Q6UY11 383 aa14.24□□□□□ -0.13
BEST3-209ENST00000548658 MTMR14Q8NCE2 650 aa14.24□□□□□ -0.13
BEST3-209ENST00000548658 FAM84BQ96KN1 310 aaPredicted RBP14.24□□□□□ -0.13
BEST3-209ENST00000548658 GYG1P46976 350 aa14.23□□□□□ -0.13
BEST3-209ENST00000548658 ZNF157P51786 506 aaPredicted RBP14.23□□□□□ -0.13
BEST3-209ENST00000548658 LRRC24Q50LG9 513 aa14.23□□□□□ -0.13
BEST3-209ENST00000548658 REM2Q8IYK8 340 aaPredicted RBP14.23□□□□□ -0.13
BEST3-209ENST00000548658 EYA2O00167 538 aa14.22□□□□□ -0.13
BEST3-209ENST00000548658 AOC2O75106 756 aa14.22□□□□□ -0.13
BEST3-209ENST00000548658 FRAT2O75474 233 aaPredicted RBP14.22□□□□□ -0.13
BEST3-209ENST00000548658 IFIT1P09914 478 aaKnown RBP14.22□□□□□ -0.13
BEST3-209ENST00000548658 LBX1P52954 281 aa14.22□□□□□ -0.13
BEST3-209ENST00000548658 HNRNPUQ00839 825 aaKnown RBP eCLIP14.22□□□□□ -0.13
BEST3-209ENST00000548658 PUM3Q15397 648 aaKnown RBP14.22□□□□□ -0.13
BEST3-209ENST00000548658 MFSD14BQ5SR56 506 aa14.22□□□□□ -0.13
BEST3-209ENST00000548658 INTS3Q68E01 1043 aaKnown RBP14.22□□□□□ -0.13
BEST3-209ENST00000548658 FBXO33Q7Z6M2 555 aa14.22□□□□□ -0.13
BEST3-209ENST00000548658 CERS5Q8N5B7 392 aa14.22□□□□□ -0.13
BEST3-209ENST00000548658 TBC1D22AQ8WUA7 517 aa14.22□□□□□ -0.13
BEST3-209ENST00000548658 ZBED3Q96IU2 234 aaPredicted RBP14.22□□□□□ -0.13
BEST3-209ENST00000548658 A0A1B0GUL6 1792 aa14.22□□□□□ -0.13
BEST3-209ENST00000548658 F8W031 263 aaPredicted RBP14.21□□□□□ -0.13
BEST3-209ENST00000548658 GNAI3P08754 354 aa14.21□□□□□ -0.13
BEST3-209ENST00000548658 POLA2Q14181 598 aa14.21□□□□□ -0.13
BEST3-209ENST00000548658 VGLL2Q8N8G2 317 aa14.21□□□□□ -0.13
BEST3-209ENST00000548658 KLHDC4Q8TBB5 520 aa14.21□□□□□ -0.13
BEST3-209ENST00000548658 PPP2R3BQ9Y5P8 575 aa14.21□□□□□ -0.13
BEST3-209ENST00000548658 THSD7BQ9C0I4 1608 aa14.21□□□□□ -0.13
BEST3-209ENST00000548658 ZNF646O15015 1829 aaPredicted RBP14.2□□□□□ -0.14
BEST3-209ENST00000548658 CIAO1O76071 339 aa14.2□□□□□ -0.14
BEST3-209ENST00000548658 HSPA8P11142 646 aaKnown RBP14.2□□□□□ -0.14
BEST3-209ENST00000548658 RFX5P48382 616 aaPredicted RBP14.2□□□□□ -0.14
BEST3-209ENST00000548658 RBM5P52756 815 aaKnown RBP eCLIP14.2□□□□□ -0.14
BEST3-209ENST00000548658 PTPN12Q05209 780 aaKnown RBP14.2□□□□□ -0.14
BEST3-209ENST00000548658 CFAP100Q494V2 611 aa14.2□□□□□ -0.14
BEST3-209ENST00000548658 LPIN2Q92539 896 aa14.2□□□□□ -0.14
BEST3-209ENST00000548658 SERPINA10Q9UK55 444 aa14.2□□□□□ -0.14
BEST3-209ENST00000548658 SPDYE2BA6NHP3 402 aa14.19□□□□□ -0.14
BEST3-209ENST00000548658 FAM155AB1AL88 458 aaPredicted RBP14.19□□□□□ -0.14
BEST3-209ENST00000548658 SPDYE6P0CI01 402 aa14.19□□□□□ -0.14
BEST3-209ENST00000548658 SLC5A1P13866 664 aa14.19□□□□□ -0.14
BEST3-209ENST00000548658 TTLL12Q14166 644 aaPredicted RBP14.19□□□□□ -0.14
BEST3-209ENST00000548658 ATF7IPQ6VMQ6 1270 aa14.19□□□□□ -0.14
BEST3-209ENST00000548658 ARMC9Q7Z3E5 817 aa14.19□□□□□ -0.14
BEST3-209ENST00000548658 DEFB129Q9H1M3 183 aa14.19□□□□□ -0.14
BEST3-209ENST00000548658 CEP126Q9P2H0 1117 aa14.19□□□□□ -0.14
BEST3-209ENST00000548658 TTF2Q9UNY4 1162 aaKnown RBP14.19□□□□□ -0.14
BEST3-209ENST00000548658 LRRFIP2Q9Y608 721 aaKnown RBP14.19□□□□□ -0.14
BEST3-209ENST00000548658 COL1A1P02452 1464 aaPredicted RBP14.18□□□□□ -0.14
BEST3-209ENST00000548658 SLC10A3P09131 477 aa14.18□□□□□ -0.14
BEST3-209ENST00000548658 TRIM27P14373 513 aa14.18□□□□□ -0.14
BEST3-209ENST00000548658 FGFR2P21802 821 aa14.18□□□□□ -0.14
BEST3-209ENST00000548658 IL15P40933 162 aaPredicted RBP14.18□□□□□ -0.14
BEST3-209ENST00000548658 HDLBPQ00341 1268 aaKnown RBP14.18□□□□□ -0.14
BEST3-209ENST00000548658 TNFAIP1Q13829 316 aa14.18□□□□□ -0.14
BEST3-209ENST00000548658 SUPT20HL1Q3ZLR7 823 aa14.18□□□□□ -0.14
BEST3-209ENST00000548658 PRAMEF18Q5VWM3 479 aa14.18□□□□□ -0.14
BEST3-209ENST00000548658 FRAT1Q92837 279 aaPredicted RBP14.18□□□□□ -0.14
BEST3-209ENST00000548658 PRMT6Q96LA8 375 aaPredicted RBP14.18□□□□□ -0.14
BEST3-209ENST00000548658 COPRSQ9NQ92 184 aa14.18□□□□□ -0.14
BEST3-209ENST00000548658 SCAF8Q9UPN6 1271 aaKnown RBP14.18□□□□□ -0.14
BEST3-209ENST00000548658 JAG2Q9Y219 1238 aa14.18□□□□□ -0.14
BEST3-209ENST00000548658 SUGT1Q9Y2Z0 365 aa14.18□□□□□ -0.14
BEST3-209ENST00000548658 PAPPA2Q9BXP8 1791 aa14.18□□□□□ -0.14
BEST3-209ENST00000548658 PPP1R12BO60237 982 aaPredicted RBP14.17□□□□□ -0.14
BEST3-209ENST00000548658 BCAMP50895 628 aa14.17□□□□□ -0.14
BEST3-209ENST00000548658 KIF23Q02241 960 aaPredicted RBP14.17□□□□□ -0.14
BEST3-209ENST00000548658 ZKSCAN2Q63HK3 967 aa14.17□□□□□ -0.14
BEST3-209ENST00000548658 ATG9AQ7Z3C6 839 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms