RNA–Protein interactions for RNA: ENST00000548279.5

CACNB3-208, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-208ENST00000548279 PDE8BO95263 885 aa28.94■■■□□ 2.22
CACNB3-208ENST00000548279 HIBADHP31937 336 aaKnown RBP28.94■■■□□ 2.22
CACNB3-208ENST00000548279 FRAT1Q92837 279 aaPredicted RBP28.94■■■□□ 2.22
CACNB3-208ENST00000548279 GBA2Q9HCG7 927 aaPredicted RBP28.94■■■□□ 2.22
CACNB3-208ENST00000548279 PCDHAC2Q9Y5I4 1007 aa28.94■■■□□ 2.22
CACNB3-208ENST00000548279 EYA2O00167 538 aa28.93■■■□□ 2.22
CACNB3-208ENST00000548279 ECE1P42892 770 aa28.93■■■□□ 2.22
CACNB3-208ENST00000548279 ATF7IPQ6VMQ6 1270 aa28.93■■■□□ 2.22
CACNB3-208ENST00000548279 HHIPL1Q96JK4 782 aa28.93■■■□□ 2.22
CACNB3-208ENST00000548279 HDAC9Q9UKV0 1011 aa28.93■■■□□ 2.22
CACNB3-208ENST00000548279 FAM205AQ6ZU69 1335 aa28.93■■■□□ 2.22
CACNB3-208ENST00000548279 ARAP2Q8WZ64 1704 aa28.92■■■□□ 2.22
CACNB3-208ENST00000548279 F8W031 263 aaPredicted RBP28.92■■■□□ 2.22
CACNB3-208ENST00000548279 HUNKP57058 714 aa28.92■■■□□ 2.22
CACNB3-208ENST00000548279 FKBP1AP62942 108 aaKnown RBP28.92■■■□□ 2.22
CACNB3-208ENST00000548279 ATG9AQ7Z3C6 839 aa28.92■■■□□ 2.22
CACNB3-208ENST00000548279 ZBED9Q6R2W3 1325 aa28.92■■■□□ 2.22
CACNB3-208ENST00000548279 FGFR2P21802 821 aa28.91■■■□□ 2.22
CACNB3-208ENST00000548279 PRAMEF18Q5VWM3 479 aa28.91■■■□□ 2.22
CACNB3-208ENST00000548279 FBXO33Q7Z6M2 555 aa28.91■■■□□ 2.22
CACNB3-208ENST00000548279 CLUAP1Q96AJ1 413 aa28.91■■■□□ 2.22
CACNB3-208ENST00000548279 MMP14P50281 582 aa28.9■■■□□ 2.22
CACNB3-208ENST00000548279 SIL1Q9H173 461 aa28.9■■■□□ 2.22
CACNB3-208ENST00000548279 IQSEC3Q9UPP2 1182 aaPredicted RBP28.9■■■□□ 2.22
CACNB3-208ENST00000548279 IPO8O15397 1037 aaKnown RBP28.89■■■□□ 2.22
CACNB3-208ENST00000548279 C2orf69Q8N8R5 385 aa28.89■■■□□ 2.22
CACNB3-208ENST00000548279 PA2G4Q9UQ80 394 aaKnown RBP28.89■■■□□ 2.22
CACNB3-208ENST00000548279 ECM29Q5VYK3 1845 aa28.89■■■□□ 2.22
CACNB3-208ENST00000548279 AOX1Q06278 1338 aa28.89■■■□□ 2.21
CACNB3-208ENST00000548279 MFSD14BQ5SR56 506 aa28.87■■■□□ 2.21
CACNB3-208ENST00000548279 ZIC5Q96T25 663 aa28.87■■■□□ 2.21
CACNB3-208ENST00000548279 PAPPA2Q9BXP8 1791 aa28.86■■■□□ 2.21
CACNB3-208ENST00000548279 BCAMP50895 628 aa28.86■■■□□ 2.21
CACNB3-208ENST00000548279 PUM3Q15397 648 aaKnown RBP28.86■■■□□ 2.21
CACNB3-208ENST00000548279 DLGAP5Q15398 846 aa28.86■■■□□ 2.21
CACNB3-208ENST00000548279 GRIK5Q16478 980 aa28.86■■■□□ 2.21
CACNB3-208ENST00000548279 CFAP100Q494V2 611 aa28.86■■■□□ 2.21
CACNB3-208ENST00000548279 MTMR14Q8NCE2 650 aa28.86■■■□□ 2.21
CACNB3-208ENST00000548279 GNAI3P08754 354 aa28.85■■■□□ 2.21
CACNB3-208ENST00000548279 MAP2K1Q02750 393 aaPredicted RBP28.85■■■□□ 2.21
CACNB3-208ENST00000548279 IFFO2Q5TF58 517 aa28.85■■■□□ 2.21
CACNB3-208ENST00000548279 MOB2Q70IA6 237 aa28.85■■■□□ 2.21
CACNB3-208ENST00000548279 AIDAQ96BJ3 306 aa28.85■■■□□ 2.21
CACNB3-208ENST00000548279 CIAO1O76071 339 aa28.84■■■□□ 2.21
CACNB3-208ENST00000548279 MAP2K2P36507 400 aa28.84■■■□□ 2.21
CACNB3-208ENST00000548279 CAVIN4Q5BKX8 364 aa28.84■■■□□ 2.21
CACNB3-208ENST00000548279 ZKSCAN2Q63HK3 967 aa28.84■■■□□ 2.21
CACNB3-208ENST00000548279 RGMBQ6NW40 437 aa28.84■■■□□ 2.21
CACNB3-208ENST00000548279 VPS37DQ86XT2 251 aa28.84■■■□□ 2.21
CACNB3-208ENST00000548279 TMEM57Q8N5G2 664 aa28.84■■■□□ 2.21
CACNB3-208ENST00000548279 HDAC5Q9UQL6 1122 aa28.84■■■□□ 2.21
CACNB3-208ENST00000548279 FAM155AB1AL88 458 aaPredicted RBP28.83■■■□□ 2.21
CACNB3-208ENST00000548279 CHAF1AQ13111 956 aaPredicted RBP28.83■■■□□ 2.21
CACNB3-208ENST00000548279 PRMT6Q96LA8 375 aaPredicted RBP28.83■■■□□ 2.21
CACNB3-208ENST00000548279 FBXO3Q9UK99 471 aa28.83■■■□□ 2.21
CACNB3-208ENST00000548279 SPDYE2BA6NHP3 402 aa28.82■■■□□ 2.2
CACNB3-208ENST00000548279 IFIT1P09914 478 aaKnown RBP28.82■■■□□ 2.2
CACNB3-208ENST00000548279 SPDYE6P0CI01 402 aa28.82■■■□□ 2.2
CACNB3-208ENST00000548279 CTCFP49711 727 aaPredicted RBP28.82■■■□□ 2.2
CACNB3-208ENST00000548279 APOBEC3FQ8IUX4 373 aaKnown RBP28.82■■■□□ 2.2
CACNB3-208ENST00000548279 COPRSQ9NQ92 184 aa28.82■■■□□ 2.2
CACNB3-208ENST00000548279 CLRN2A0PK11 232 aa28.81■■■□□ 2.2
CACNB3-208ENST00000548279 HSPA8P11142 646 aaKnown RBP28.81■■■□□ 2.2
CACNB3-208ENST00000548279 MTX1Q13505 466 aa28.81■■■□□ 2.2
CACNB3-208ENST00000548279 LPIN2Q92539 896 aa28.81■■■□□ 2.2
CACNB3-208ENST00000548279 TTF2Q9UNY4 1162 aaKnown RBP28.81■■■□□ 2.2
CACNB3-208ENST00000548279 COL1A1P02452 1464 aaPredicted RBP28.8■■■□□ 2.2
CACNB3-208ENST00000548279 SLC5A1P13866 664 aa28.8■■■□□ 2.2
CACNB3-208ENST00000548279 LBX1P52954 281 aa28.8■■■□□ 2.2
CACNB3-208ENST00000548279 MYH13Q9UKX3 1938 aa28.8■■■□□ 2.2
CACNB3-208ENST00000548279 SRGAP3O43295 1099 aa28.79■■■□□ 2.2
CACNB3-208ENST00000548279 ZNF157P51786 506 aaPredicted RBP28.79■■■□□ 2.2
CACNB3-208ENST00000548279 CEP126Q9P2H0 1117 aa28.79■■■□□ 2.2
CACNB3-208ENST00000548279 FRAT2O75474 233 aaPredicted RBP28.78■■■□□ 2.2
CACNB3-208ENST00000548279 RLBP1P12271 317 aa28.78■■■□□ 2.2
CACNB3-208ENST00000548279 IL15P40933 162 aaPredicted RBP28.78■■■□□ 2.2
CACNB3-208ENST00000548279 RBM5P52756 815 aaKnown RBP eCLIP28.78■■■□□ 2.2
CACNB3-208ENST00000548279 NOGQ13253 232 aa28.78■■■□□ 2.2
CACNB3-208ENST00000548279 ATP2B3Q16720 1220 aa28.78■■■□□ 2.2
CACNB3-208ENST00000548279 SSC5DA1L4H1 1573 aa28.77■■■□□ 2.2
CACNB3-208ENST00000548279 UBE2Q2LH0YL09 131 aa28.77■■■□□ 2.2
CACNB3-208ENST00000548279 SLC10A3P09131 477 aa28.77■■■□□ 2.2
CACNB3-208ENST00000548279 FKBP1BP68106 108 aa28.77■■■□□ 2.2
CACNB3-208ENST00000548279 DEFB129Q9H1M3 183 aa28.77■■■□□ 2.2
CACNB3-208ENST00000548279 PNMA6EA0A0J9YXQ4 647 aa28.76■■■□□ 2.19
CACNB3-208ENST00000548279 GNAI2P04899 355 aa28.76■■■□□ 2.19
CACNB3-208ENST00000548279 PRDM10Q9NQV6 1147 aa28.76■■■□□ 2.19
CACNB3-208ENST00000548279 TSKSQ9UJT2 592 aa28.76■■■□□ 2.19
CACNB3-208ENST00000548279 SERPINA10Q9UK55 444 aa28.76■■■□□ 2.19
CACNB3-208ENST00000548279 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.76■■■□□ 2.19
CACNB3-208ENST00000548279 CRKP46108 304 aa28.75■■■□□ 2.19
CACNB3-208ENST00000548279 RASAL3Q86YV0 1011 aa28.75■■■□□ 2.19
CACNB3-208ENST00000548279 TNS4Q8IZW8 715 aa28.75■■■□□ 2.19
CACNB3-208ENST00000548279 CCDC102AQ96A19 550 aa28.75■■■□□ 2.19
CACNB3-208ENST00000548279 VEZTQ9HBM0 779 aa28.75■■■□□ 2.19
CACNB3-208ENST00000548279 FZD1Q9UP38 647 aa28.75■■■□□ 2.19
CACNB3-208ENST00000548279 TBC1D22AQ8WUA7 517 aa28.74■■■□□ 2.19
CACNB3-208ENST00000548279 TDRD3Q9H7E2 651 aaKnown RBP28.74■■■□□ 2.19
CACNB3-208ENST00000548279 MYO1BO43795 1136 aa28.73■■■□□ 2.19
CACNB3-208ENST00000548279 ADORA1P30542 326 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms