RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 LINS1Q8NG48 757 aa15.23■□□□□ 0.03
TRAFD1-205ENST00000548277 CLMNQ96JQ2 1002 aa15.23■□□□□ 0.03
TRAFD1-205ENST00000548277 VEZTQ9HBM0 779 aa15.23■□□□□ 0.03
TRAFD1-205ENST00000548277 VAMP4O75379 141 aa15.22■□□□□ 0.03
TRAFD1-205ENST00000548277 FOXO4P98177 505 aa15.22■□□□□ 0.03
TRAFD1-205ENST00000548277 EXOSC9Q06265 439 aaKnown RBP15.22■□□□□ 0.03
TRAFD1-205ENST00000548277 CCDC27Q2M243 656 aa15.22■□□□□ 0.03
TRAFD1-205ENST00000548277 LDLRAD1Q5T700 205 aa15.22■□□□□ 0.03
TRAFD1-205ENST00000548277 ZBED3Q96IU2 234 aaPredicted RBP15.22■□□□□ 0.03
TRAFD1-205ENST00000548277 PRMT6Q96LA8 375 aaPredicted RBP15.22■□□□□ 0.03
TRAFD1-205ENST00000548277 TAF7LQ5H9L4 462 aa15.21■□□□□ 0.03
TRAFD1-205ENST00000548277 NBPF12Q5TAG4 269 aaPredicted RBP15.21■□□□□ 0.03
TRAFD1-205ENST00000548277 FBXO46Q6PJ61 603 aaPredicted RBP15.21■□□□□ 0.03
TRAFD1-205ENST00000548277 LMBR1LQ6UX01 489 aa15.21■□□□□ 0.03
TRAFD1-205ENST00000548277 AOX1Q06278 1338 aa15.2■□□□□ 0.02
TRAFD1-205ENST00000548277 FANCIQ9NVI1 1328 aa15.2■□□□□ 0.02
TRAFD1-205ENST00000548277 MYO1BO43795 1136 aa15.2■□□□□ 0.02
TRAFD1-205ENST00000548277 PPP1R12BO60237 982 aaPredicted RBP15.2■□□□□ 0.02
TRAFD1-205ENST00000548277 ZEB1P37275 1124 aaPredicted RBP15.2■□□□□ 0.02
TRAFD1-205ENST00000548277 EPHA10Q5JZY3 1008 aa15.2■□□□□ 0.02
TRAFD1-205ENST00000548277 ZNF804AQ7Z570 1209 aa15.2■□□□□ 0.02
TRAFD1-205ENST00000548277 IFNL1Q8IU54 200 aa15.2■□□□□ 0.02
TRAFD1-205ENST00000548277 CNNM1Q9NRU3 951 aa15.2■□□□□ 0.02
TRAFD1-205ENST00000548277 TRIM17Q9Y577 477 aa15.2■□□□□ 0.02
TRAFD1-205ENST00000548277 IRS2Q9Y4H2 1338 aa15.19■□□□□ 0.02
TRAFD1-205ENST00000548277 MMP14P50281 582 aa15.19■□□□□ 0.02
TRAFD1-205ENST00000548277 CCDC57Q2TAC2 916 aa15.19■□□□□ 0.02
TRAFD1-205ENST00000548277 LDHAL6AQ6ZMR3 332 aa15.19■□□□□ 0.02
TRAFD1-205ENST00000548277 WNK4Q96J92 1243 aa15.19■□□□□ 0.02
TRAFD1-205ENST00000548277 MANSC4A6NHS7 340 aaPredicted RBP15.18■□□□□ 0.02
TRAFD1-205ENST00000548277 IGF2BP3O00425 579 aaKnown RBP eCLIP15.18■□□□□ 0.02
TRAFD1-205ENST00000548277 USP2O75604 605 aaPredicted RBP15.18■□□□□ 0.02
TRAFD1-205ENST00000548277 IL1R1P14778 569 aa15.18■□□□□ 0.02
TRAFD1-205ENST00000548277 SUPT20HL1Q3ZLR7 823 aa15.18■□□□□ 0.02
TRAFD1-205ENST00000548277 BEND3Q5T5X7 828 aa15.18■□□□□ 0.02
TRAFD1-205ENST00000548277 SLC4A10Q6U841 1118 aa15.18■□□□□ 0.02
TRAFD1-205ENST00000548277 MRS2Q9HD23 443 aa15.18■□□□□ 0.02
TRAFD1-205ENST00000548277 IL16Q14005 1332 aa15.17■□□□□ 0.02
TRAFD1-205ENST00000548277 AK9Q5TCS8 1911 aa15.17■□□□□ 0.02
TRAFD1-205ENST00000548277 SSC5DA1L4H1 1573 aa15.17■□□□□ 0.02
TRAFD1-205ENST00000548277 SPDYE2BA6NHP3 402 aa15.17■□□□□ 0.02
TRAFD1-205ENST00000548277 ALDH1A1P00352 501 aa15.17■□□□□ 0.02
TRAFD1-205ENST00000548277 SPDYE6P0CI01 402 aa15.17■□□□□ 0.02
TRAFD1-205ENST00000548277 GYG1P46976 350 aa15.17■□□□□ 0.02
TRAFD1-205ENST00000548277 RASA3Q14644 834 aa15.17■□□□□ 0.02
TRAFD1-205ENST00000548277 PRPF38BQ5VTL8 546 aaKnown RBP15.17■□□□□ 0.02
TRAFD1-205ENST00000548277 MTMR14Q8NCE2 650 aa15.17■□□□□ 0.02
TRAFD1-205ENST00000548277 TDRD3Q9H7E2 651 aaKnown RBP15.17■□□□□ 0.02
TRAFD1-205ENST00000548277 C9orf78Q9NZ63 289 aaPredicted RBP15.17■□□□□ 0.02
TRAFD1-205ENST00000548277 OTOFQ9HC10 1997 aa15.16■□□□□ 0.02
TRAFD1-205ENST00000548277 GJA5P36382 358 aa15.16■□□□□ 0.02
TRAFD1-205ENST00000548277 IREB2P48200 963 aaKnown RBP15.16■□□□□ 0.02
TRAFD1-205ENST00000548277 INHBEP58166 350 aa15.16■□□□□ 0.02
TRAFD1-205ENST00000548277 MAP3K11Q16584 847 aa15.16■□□□□ 0.02
TRAFD1-205ENST00000548277 NOM1Q5C9Z4 860 aaKnown RBP15.16■□□□□ 0.02
TRAFD1-205ENST00000548277 C15orf52Q6ZUT6 534 aaKnown RBP15.16■□□□□ 0.02
TRAFD1-205ENST00000548277 CD99L2Q8TCZ2 262 aa15.16■□□□□ 0.02
TRAFD1-205ENST00000548277 PUS3Q9BZE2 481 aaKnown RBP15.16■□□□□ 0.02
TRAFD1-205ENST00000548277 ELP3Q9H9T3 547 aa15.16■□□□□ 0.02
TRAFD1-205ENST00000548277 SPINK5Q9NQ38 1064 aaPredicted RBP15.16■□□□□ 0.02
TRAFD1-205ENST00000548277 TCP10L2B9ZVM9 353 aa15.15■□□□□ 0.02
TRAFD1-205ENST00000548277 GRM8O00222 908 aa15.15■□□□□ 0.02
TRAFD1-205ENST00000548277 ZBTB48P10074 688 aaPredicted RBP15.15■□□□□ 0.02
TRAFD1-205ENST00000548277 OTOP1Q7RTM1 612 aa15.15■□□□□ 0.02
TRAFD1-205ENST00000548277 CFHR5Q9BXR6 569 aa15.15■□□□□ 0.02
TRAFD1-205ENST00000548277 ZNF70Q9UC06 446 aaPredicted RBP15.15■□□□□ 0.02
TRAFD1-205ENST00000548277 TTF2Q9UNY4 1162 aaKnown RBP15.15■□□□□ 0.02
TRAFD1-205ENST00000548277 IQSEC3Q9UPP2 1182 aaPredicted RBP15.15■□□□□ 0.02
TRAFD1-205ENST00000548277 PPP2R3BQ9Y5P8 575 aa15.15■□□□□ 0.02
TRAFD1-205ENST00000548277 COL1A1P02452 1464 aaPredicted RBP15.14■□□□□ 0.01
TRAFD1-205ENST00000548277 POTEFA5A3E0 1075 aa15.14■□□□□ 0.01
TRAFD1-205ENST00000548277 CRHR2Q13324 411 aa15.14■□□□□ 0.01
TRAFD1-205ENST00000548277 MFSD14BQ5SR56 506 aa15.14■□□□□ 0.01
TRAFD1-205ENST00000548277 WDR63Q8IWG1 891 aa15.14■□□□□ 0.01
TRAFD1-205ENST00000548277 CDAN1Q8IWY9 1227 aa15.14■□□□□ 0.01
TRAFD1-205ENST00000548277 KIAA0100Q14667 2235 aaKnown RBP15.14■□□□□ 0.01
TRAFD1-205ENST00000548277 LAMB1P07942 1786 aa15.13■□□□□ 0.01
TRAFD1-205ENST00000548277 HIBADHP31937 336 aaKnown RBP15.13■□□□□ 0.01
TRAFD1-205ENST00000548277 FKBP1AP62942 108 aaKnown RBP15.13■□□□□ 0.01
TRAFD1-205ENST00000548277 OTUD7BQ6GQQ9 843 aa15.13■□□□□ 0.01
TRAFD1-205ENST00000548277 ANKRD13AQ8IZ07 590 aa15.13■□□□□ 0.01
TRAFD1-205ENST00000548277 CNKSR2Q8WXI2 1034 aa15.13■□□□□ 0.01
TRAFD1-205ENST00000548277 OPTNQ96CV9 577 aa15.13■□□□□ 0.01
TRAFD1-205ENST00000548277 SUCLG2Q96I99 432 aa15.13■□□□□ 0.01
TRAFD1-205ENST00000548277 FAM84BQ96KN1 310 aaPredicted RBP15.13■□□□□ 0.01
TRAFD1-205ENST00000548277 PTPN18Q99952 460 aa15.13■□□□□ 0.01
TRAFD1-205ENST00000548277 ZNF316A6NFI3 1004 aaPredicted RBP15.12■□□□□ 0.01
TRAFD1-205ENST00000548277 ECM2O94769 699 aaPredicted RBP15.12■□□□□ 0.01
TRAFD1-205ENST00000548277 CHAF1AQ13111 956 aaPredicted RBP15.12■□□□□ 0.01
TRAFD1-205ENST00000548277 GRIK5Q16478 980 aa15.12■□□□□ 0.01
TRAFD1-205ENST00000548277 FAM9BQ8IZU0 186 aa15.12■□□□□ 0.01
TRAFD1-205ENST00000548277 TDRD7Q8NHU6 1098 aaKnown RBP15.12■□□□□ 0.01
TRAFD1-205ENST00000548277 ERO1AQ96HE7 468 aa15.12■□□□□ 0.01
TRAFD1-205ENST00000548277 SRCIN1Q9C0H9 1055 aa15.12■□□□□ 0.01
TRAFD1-205ENST00000548277 FRAT2O75474 233 aaPredicted RBP15.11■□□□□ 0.01
TRAFD1-205ENST00000548277 CAP1Q01518 475 aa15.11■□□□□ 0.01
TRAFD1-205ENST00000548277 SPDYE2Q495Y8 402 aa15.11■□□□□ 0.01
TRAFD1-205ENST00000548277 VPS37DQ86XT2 251 aa15.11■□□□□ 0.01
TRAFD1-205ENST00000548277 DZIP1LQ8IYY4 767 aaKnown RBP15.11■□□□□ 0.01
TRAFD1-205ENST00000548277 TMEM39BQ9GZU3 492 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms