RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 FGFR2P21802 821 aa18.41■□□□□ 0.54
CCDC38-205ENST00000546947 MTX1Q13505 466 aa18.41■□□□□ 0.54
CCDC38-205ENST00000546947 ATG9AQ7Z3C6 839 aa18.41■□□□□ 0.54
CCDC38-205ENST00000546947 FBXO33Q7Z6M2 555 aa18.41■□□□□ 0.54
CCDC38-205ENST00000546947 VPS37DQ86XT2 251 aa18.41■□□□□ 0.54
CCDC38-205ENST00000546947 KIAA0825Q8IV33 1275 aa18.41■□□□□ 0.54
CCDC38-205ENST00000546947 SULF1Q8IWU6 871 aa18.41■□□□□ 0.54
CCDC38-205ENST00000546947 FTSJ3Q8IY81 847 aaKnown RBP18.41■□□□□ 0.54
CCDC38-205ENST00000546947 DZIP1LQ8IYY4 767 aaKnown RBP18.41■□□□□ 0.54
CCDC38-205ENST00000546947 COPRSQ9NQ92 184 aa18.41■□□□□ 0.54
CCDC38-205ENST00000546947 TLL2Q9Y6L7 1015 aa18.41■□□□□ 0.54
CCDC38-205ENST00000546947 MYH13Q9UKX3 1938 aa18.41■□□□□ 0.54
CCDC38-205ENST00000546947 ANGEL2Q5VTE6 544 aaKnown RBP18.4■□□□□ 0.54
CCDC38-205ENST00000546947 CERS5Q8N5B7 392 aa18.4■□□□□ 0.54
CCDC38-205ENST00000546947 SIL1Q9H173 461 aa18.4■□□□□ 0.54
CCDC38-205ENST00000546947 ZNF408Q9H9D4 720 aa18.4■□□□□ 0.54
CCDC38-205ENST00000546947 ASTN2O75129 1339 aaPredicted RBP18.4■□□□□ 0.54
CCDC38-205ENST00000546947 ADM5C9JUS6 153 aa18.39■□□□□ 0.53
CCDC38-205ENST00000546947 WNT10BO00744 389 aa18.39■□□□□ 0.53
CCDC38-205ENST00000546947 SLC5A1P13866 664 aa18.39■□□□□ 0.53
CCDC38-205ENST00000546947 IL15P40933 162 aaPredicted RBP18.39■□□□□ 0.53
CCDC38-205ENST00000546947 LPIN2Q92539 896 aa18.39■□□□□ 0.53
CCDC38-205ENST00000546947 CEP126Q9P2H0 1117 aa18.39■□□□□ 0.53
CCDC38-205ENST00000546947 SRGAP3O43295 1099 aa18.38■□□□□ 0.53
CCDC38-205ENST00000546947 VEGFBP49765 207 aa18.38■□□□□ 0.53
CCDC38-205ENST00000546947 NBPF9Q3BBW0 867 aa18.38■□□□□ 0.53
CCDC38-205ENST00000546947 PA2G4Q9UQ80 394 aaKnown RBP18.38■□□□□ 0.53
CCDC38-205ENST00000546947 ECE1P42892 770 aa18.37■□□□□ 0.53
CCDC38-205ENST00000546947 SAPCD2Q86UD0 394 aa18.37■□□□□ 0.53
CCDC38-205ENST00000546947 MTMR14Q8NCE2 650 aa18.37■□□□□ 0.53
CCDC38-205ENST00000546947 ZBED3Q96IU2 234 aaPredicted RBP18.37■□□□□ 0.53
CCDC38-205ENST00000546947 HHIPL1Q96JK4 782 aa18.37■□□□□ 0.53
CCDC38-205ENST00000546947 JAG2Q9Y219 1238 aa18.37■□□□□ 0.53
CCDC38-205ENST00000546947 FRAT2O75474 233 aaPredicted RBP18.36■□□□□ 0.53
CCDC38-205ENST00000546947 BCAMP50895 628 aa18.36■□□□□ 0.53
CCDC38-205ENST00000546947 DLGAP5Q15398 846 aa18.36■□□□□ 0.53
CCDC38-205ENST00000546947 MFSD14BQ5SR56 506 aa18.36■□□□□ 0.53
CCDC38-205ENST00000546947 WDR33Q9C0J8 1336 aaKnown RBP18.36■□□□□ 0.53
CCDC38-205ENST00000546947 THSD7BQ9C0I4 1608 aa18.35■□□□□ 0.53
CCDC38-205ENST00000546947 F8W031 263 aaPredicted RBP18.35■□□□□ 0.53
CCDC38-205ENST00000546947 MS4A1P11836 297 aa18.35■□□□□ 0.53
CCDC38-205ENST00000546947 RLBP1P12271 317 aa18.35■□□□□ 0.53
CCDC38-205ENST00000546947 ATP2B3Q16720 1220 aa18.35■□□□□ 0.53
CCDC38-205ENST00000546947 DLK2Q6UY11 383 aa18.35■□□□□ 0.53
CCDC38-205ENST00000546947 ITPRIPQ8IWB1 547 aa18.35■□□□□ 0.53
CCDC38-205ENST00000546947 TBC1D22AQ8WUA7 517 aa18.35■□□□□ 0.53
CCDC38-205ENST00000546947 CDCA5Q96FF9 252 aa18.35■□□□□ 0.53
CCDC38-205ENST00000546947 GBA2Q9HCG7 927 aaPredicted RBP18.35■□□□□ 0.53
CCDC38-205ENST00000546947 ZBTB7BO15156 539 aaPredicted RBP18.34■□□□□ 0.53
CCDC38-205ENST00000546947 CFAP100Q494V2 611 aa18.34■□□□□ 0.53
CCDC38-205ENST00000546947 APOBEC3FQ8IUX4 373 aaKnown RBP18.34■□□□□ 0.53
CCDC38-205ENST00000546947 C2orf69Q8N8R5 385 aa18.34■□□□□ 0.53
CCDC38-205ENST00000546947 CAPNS2Q96L46 248 aa18.34■□□□□ 0.53
CCDC38-205ENST00000546947 IQSEC3Q9UPP2 1182 aaPredicted RBP18.34■□□□□ 0.53
CCDC38-205ENST00000546947 PNMA6EA0A0J9YXQ4 647 aa18.33■□□□□ 0.52
CCDC38-205ENST00000546947 HSPA1AP0DMV8 641 aaKnown RBP18.33■□□□□ 0.52
CCDC38-205ENST00000546947 HSPA1BP0DMV9 641 aaKnown RBP18.33■□□□□ 0.52
CCDC38-205ENST00000546947 CHAF1AQ13111 956 aaPredicted RBP18.33■□□□□ 0.52
CCDC38-205ENST00000546947 CYP4F22Q6NT55 531 aa18.33■□□□□ 0.52
CCDC38-205ENST00000546947 PAXIP1Q6ZW49 1069 aaPredicted RBP18.33■□□□□ 0.52
CCDC38-205ENST00000546947 COL1A1P02452 1464 aaPredicted RBP18.33■□□□□ 0.52
CCDC38-205ENST00000546947 PAPPA2Q9BXP8 1791 aa18.32■□□□□ 0.52
CCDC38-205ENST00000546947 MYO1BO43795 1136 aa18.32■□□□□ 0.52
CCDC38-205ENST00000546947 SERPINA10Q9UK55 444 aa18.32■□□□□ 0.52
CCDC38-205ENST00000546947 RCAN3Q9UKA8 241 aa18.32■□□□□ 0.52
CCDC38-205ENST00000546947 TTF2Q9UNY4 1162 aaKnown RBP18.32■□□□□ 0.52
CCDC38-205ENST00000546947 AKAP2Q9Y2D5 859 aa18.32■□□□□ 0.52
CCDC38-205ENST00000546947 SPDYE2BA6NHP3 402 aa18.31■□□□□ 0.52
CCDC38-205ENST00000546947 ZBTB22O15209 634 aa18.31■□□□□ 0.52
CCDC38-205ENST00000546947 SPDYE6P0CI01 402 aa18.31■□□□□ 0.52
CCDC38-205ENST00000546947 HUNKP57058 714 aa18.31■□□□□ 0.52
CCDC38-205ENST00000546947 ATP8B2P98198 1209 aa18.31■□□□□ 0.52
CCDC38-205ENST00000546947 GNL3LQ9NVN8 582 aaKnown RBP18.31■□□□□ 0.52
CCDC38-205ENST00000546947 SCAF8Q9UPN6 1271 aaKnown RBP18.31■□□□□ 0.52
CCDC38-205ENST00000546947 SUGT1Q9Y2Z0 365 aa18.31■□□□□ 0.52
CCDC38-205ENST00000546947 RBM5P52756 815 aaKnown RBP eCLIP18.3■□□□□ 0.52
CCDC38-205ENST00000546947 FKBP1BP68106 108 aa18.3■□□□□ 0.52
CCDC38-205ENST00000546947 G3BP1Q13283 466 aaKnown RBP eCLIP18.3■□□□□ 0.52
CCDC38-205ENST00000546947 POLA2Q14181 598 aa18.3■□□□□ 0.52
CCDC38-205ENST00000546947 WDR66Q8TBY9 1149 aa18.3■□□□□ 0.52
CCDC38-205ENST00000546947 PANK1Q8TE04 598 aa18.3■□□□□ 0.52
CCDC38-205ENST00000546947 PRMT6Q96LA8 375 aaPredicted RBP18.3■□□□□ 0.52
CCDC38-205ENST00000546947 PCDHAC2Q9Y5I4 1007 aa18.3■□□□□ 0.52
CCDC38-205ENST00000546947 MAST3O60307 1309 aa18.29■□□□□ 0.52
CCDC38-205ENST00000546947 CRKP46108 304 aa18.29■□□□□ 0.52
CCDC38-205ENST00000546947 HDLBPQ00341 1268 aaKnown RBP18.29■□□□□ 0.52
CCDC38-205ENST00000546947 MAP2K1Q02750 393 aaPredicted RBP18.29■□□□□ 0.52
CCDC38-205ENST00000546947 TFCP2Q12800 502 aa18.29■□□□□ 0.52
CCDC38-205ENST00000546947 GRM1Q13255 1194 aa18.29■□□□□ 0.52
CCDC38-205ENST00000546947 SSH3Q8TE77 659 aa18.29■□□□□ 0.52
CCDC38-205ENST00000546947 PPP2R3BQ9Y5P8 575 aa18.29■□□□□ 0.52
CCDC38-205ENST00000546947 A0A1B0GUL7 405 aa18.28■□□□□ 0.52
CCDC38-205ENST00000546947 SEMA3EO15041 775 aa18.28■□□□□ 0.52
CCDC38-205ENST00000546947 NF2P35240 595 aa18.28■□□□□ 0.52
CCDC38-205ENST00000546947 MAP2K2P36507 400 aa18.28■□□□□ 0.52
CCDC38-205ENST00000546947 MRIQ9BWK5 157 aa18.28■□□□□ 0.52
CCDC38-205ENST00000546947 C1orf115Q9H7X2 142 aa18.28■□□□□ 0.52
CCDC38-205ENST00000546947 DENND2AQ9ULE3 1009 aa18.28■□□□□ 0.52
CCDC38-205ENST00000546947 PHKA1P46020 1223 aa18.27■□□□□ 0.52
CCDC38-205ENST00000546947 TIMM10P62072 90 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms