RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 NAA30Q147X3 362 aaPredicted RBP10.18□□□□□ -0.78
TDP1-204ENST00000545686 LRRFIP1Q32MZ4 808 aaKnown RBP10.18□□□□□ -0.78
TDP1-204ENST00000545686 PLBD2Q8NHP8 589 aa10.18□□□□□ -0.78
TDP1-204ENST00000545686 PAPPAQ13219 1627 aa10.18□□□□□ -0.78
TDP1-204ENST00000545686 WDR19Q8NEZ3 1342 aa10.18□□□□□ -0.78
TDP1-204ENST00000545686 A0A087WZG4 1122 aa10.17□□□□□ -0.78
TDP1-204ENST00000545686 GOLIM4O00461 696 aa10.17□□□□□ -0.78
TDP1-204ENST00000545686 IKBKBO14920 756 aa10.17□□□□□ -0.78
TDP1-204ENST00000545686 RNF113AO15541 343 aaKnown RBP10.17□□□□□ -0.78
TDP1-204ENST00000545686 IL15P40933 162 aaPredicted RBP10.17□□□□□ -0.78
TDP1-204ENST00000545686 NLRP12P59046 1061 aa10.17□□□□□ -0.78
TDP1-204ENST00000545686 STK38Q15208 465 aa10.17□□□□□ -0.78
TDP1-204ENST00000545686 ZNF771Q7L3S4 317 aaPredicted RBP10.17□□□□□ -0.78
TDP1-204ENST00000545686 ZNF496Q96IT1 587 aaPredicted RBP10.17□□□□□ -0.78
TDP1-204ENST00000545686 NCOA5Q9HCD5 579 aaKnown RBP10.17□□□□□ -0.78
TDP1-204ENST00000545686 MEGF6O75095 1541 aa10.17□□□□□ -0.78
TDP1-204ENST00000545686 CHGBP05060 677 aa10.17□□□□□ -0.78
TDP1-204ENST00000545686 SLFN14P0C7P3 912 aa10.17□□□□□ -0.78
TDP1-204ENST00000545686 FDPSP14324 419 aaKnown RBP10.17□□□□□ -0.78
TDP1-204ENST00000545686 SFPQP23246 707 aaKnown RBP eCLIP10.17□□□□□ -0.78
TDP1-204ENST00000545686 NDUFA8P51970 172 aa10.17□□□□□ -0.78
TDP1-204ENST00000545686 E4F1Q66K89 784 aaPredicted RBP10.17□□□□□ -0.78
TDP1-204ENST00000545686 FBXO38Q6PIJ6 1188 aa10.17□□□□□ -0.78
TDP1-204ENST00000545686 ATG9AQ7Z3C6 839 aa10.17□□□□□ -0.78
TDP1-204ENST00000545686 TTC5Q8N0Z6 440 aa10.17□□□□□ -0.78
TDP1-204ENST00000545686 PPP1R13BQ96KQ4 1090 aa10.17□□□□□ -0.78
TDP1-204ENST00000545686 TIGD1Q96MW7 591 aa10.17□□□□□ -0.78
TDP1-204ENST00000545686 FMNL2Q96PY5 1086 aa10.17□□□□□ -0.78
TDP1-204ENST00000545686 AXIN2Q9Y2T1 843 aa10.17□□□□□ -0.78
TDP1-204ENST00000545686 ABCC12Q96J65 1359 aa10.17□□□□□ -0.78
TDP1-204ENST00000545686 H7C1W4 665 aa10.16□□□□□ -0.78
TDP1-204ENST00000545686 MYO1BO43795 1136 aa10.16□□□□□ -0.78
TDP1-204ENST00000545686 CIAO1O76071 339 aa10.16□□□□□ -0.78
TDP1-204ENST00000545686 SLC3A2P08195 630 aaKnown RBP10.16□□□□□ -0.78
TDP1-204ENST00000545686 TATP17735 454 aaPredicted RBP10.16□□□□□ -0.78
TDP1-204ENST00000545686 FOSBP53539 338 aa10.16□□□□□ -0.78
TDP1-204ENST00000545686 FOXO4P98177 505 aa10.16□□□□□ -0.78
TDP1-204ENST00000545686 SF3A1Q15459 793 aaKnown RBP10.16□□□□□ -0.78
TDP1-204ENST00000545686 ELF2Q15723 593 aa10.16□□□□□ -0.78
TDP1-204ENST00000545686 DPCR1Q3MIW9 517 aa10.16□□□□□ -0.78
TDP1-204ENST00000545686 LMBR1LQ6UX01 489 aa10.16□□□□□ -0.78
TDP1-204ENST00000545686 IFNL2Q8IZJ0 200 aa10.16□□□□□ -0.78
TDP1-204ENST00000545686 C8orf76Q96K31 380 aa10.16□□□□□ -0.78
TDP1-204ENST00000545686 XPO4Q9C0E2 1151 aaKnown RBP10.16□□□□□ -0.78
TDP1-204ENST00000545686 TRMT1Q9NXH9 659 aaKnown RBP10.16□□□□□ -0.78
TDP1-204ENST00000545686 PHLPP2Q6ZVD8 1323 aa10.16□□□□□ -0.78
TDP1-204ENST00000545686 A0A1B0GVL5 298 aa10.16□□□□□ -0.78
TDP1-204ENST00000545686 SPTLC2O15270 562 aa10.16□□□□□ -0.78
TDP1-204ENST00000545686 H2AFXP16104 143 aaPredicted RBP10.16□□□□□ -0.78
TDP1-204ENST00000545686 TERF2Q15554 542 aa10.16□□□□□ -0.78
TDP1-204ENST00000545686 CCDC93Q567U6 631 aa10.16□□□□□ -0.78
TDP1-204ENST00000545686 ARMCX5Q6P1M9 558 aa10.16□□□□□ -0.78
TDP1-204ENST00000545686 ANKLE2Q86XL3 938 aa10.16□□□□□ -0.78
TDP1-204ENST00000545686 NFATC2IPQ8NCF5 419 aa10.16□□□□□ -0.78
TDP1-204ENST00000545686 FBXO18Q8NFZ0 1043 aa10.16□□□□□ -0.78
TDP1-204ENST00000545686 ATG3Q9NT62 314 aa10.16□□□□□ -0.78
TDP1-204ENST00000545686 AKAP11Q9UKA4 1901 aa10.15□□□□□ -0.78
TDP1-204ENST00000545686 SMC2O95347 1197 aa10.15□□□□□ -0.78
TDP1-204ENST00000545686 ZFYP08048 801 aaPredicted RBP10.15□□□□□ -0.78
TDP1-204ENST00000545686 CMA1P23946 247 aa10.15□□□□□ -0.78
TDP1-204ENST00000545686 GUCY1B3Q02153 619 aa10.15□□□□□ -0.78
TDP1-204ENST00000545686 MYSM1Q5VVJ2 828 aa10.15□□□□□ -0.78
TDP1-204ENST00000545686 TMC6Q7Z403 805 aa10.15□□□□□ -0.78
TDP1-204ENST00000545686 DCAF5Q96JK2 942 aa10.15□□□□□ -0.78
TDP1-204ENST00000545686 IFNKQ9P0W0 207 aa10.15□□□□□ -0.78
TDP1-204ENST00000545686 IFIT1P09914 478 aaKnown RBP10.15□□□□□ -0.78
TDP1-204ENST00000545686 NCAPHQ15003 741 aa10.15□□□□□ -0.78
TDP1-204ENST00000545686 FCHSD1Q86WN1 690 aa10.15□□□□□ -0.78
TDP1-204ENST00000545686 NAP1L2Q9ULW6 460 aaPredicted RBP10.15□□□□□ -0.78
TDP1-204ENST00000545686 EYA2O00167 538 aa10.14□□□□□ -0.79
TDP1-204ENST00000545686 CBFA2T2O43439 604 aa10.14□□□□□ -0.79
TDP1-204ENST00000545686 ZNF202O95125 648 aa10.14□□□□□ -0.79
TDP1-204ENST00000545686 IMMTQ16891 758 aaKnown RBP10.14□□□□□ -0.79
TDP1-204ENST00000545686 NEUROD6Q96NK8 337 aa10.14□□□□□ -0.79
TDP1-204ENST00000545686 SRRTQ9BXP5 876 aaKnown RBP10.14□□□□□ -0.79
TDP1-204ENST00000545686 CLIC4Q9Y696 253 aa10.14□□□□□ -0.79
TDP1-204ENST00000545686 MYH3P11055 1940 aa10.14□□□□□ -0.79
TDP1-204ENST00000545686 A0A087WWV3 80 aa10.14□□□□□ -0.79
TDP1-204ENST00000545686 CCDC66A2RUB6 948 aa10.14□□□□□ -0.79
TDP1-204ENST00000545686 ATP5J2-PTCD1G3V325 749 aa10.14□□□□□ -0.79
TDP1-204ENST00000545686 M0R2C6 588 aa10.14□□□□□ -0.79
TDP1-204ENST00000545686 PTCD1O75127 700 aaKnown RBP10.14□□□□□ -0.79
TDP1-204ENST00000545686 BMS1Q14692 1282 aaKnown RBP10.14□□□□□ -0.79
TDP1-204ENST00000545686 AXDND1Q5T1B0 1012 aaPredicted RBP10.14□□□□□ -0.79
TDP1-204ENST00000545686 ANO1Q5XXA6 986 aa10.14□□□□□ -0.79
TDP1-204ENST00000545686 SYNE3Q6ZMZ3 975 aa10.14□□□□□ -0.79
TDP1-204ENST00000545686 MB21D2Q8IYB1 491 aaPredicted RBP10.14□□□□□ -0.79
TDP1-204ENST00000545686 CWC25Q9NXE8 425 aaPredicted RBP10.14□□□□□ -0.79
TDP1-204ENST00000545686 TUBE1Q9UJT0 475 aa10.14□□□□□ -0.79
TDP1-204ENST00000545686 FBXO3Q9UK99 471 aa10.14□□□□□ -0.79
TDP1-204ENST00000545686 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.14□□□□□ -0.79
TDP1-204ENST00000545686 CPDO75976 1380 aa10.14□□□□□ -0.79
TDP1-204ENST00000545686 FAM237AA0A1B0GTK4 181 aa10.13□□□□□ -0.79
TDP1-204ENST00000545686 GOLGA8BA8MQT2 603 aa10.13□□□□□ -0.79
TDP1-204ENST00000545686 ETF1P62495 437 aaKnown RBP10.13□□□□□ -0.79
TDP1-204ENST00000545686 ORC3Q9UBD5 711 aaPredicted RBP10.13□□□□□ -0.79
TDP1-204ENST00000545686 PRC1O43663 620 aa10.13□□□□□ -0.79
TDP1-204ENST00000545686 PFKFB1P16118 471 aa10.13□□□□□ -0.79
TDP1-204ENST00000545686 FANCCQ00597 558 aa10.13□□□□□ -0.79
TDP1-204ENST00000545686 KIF23Q02241 960 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms