RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 C6orf229H3BNL8 230 aa11.83□□□□□ -0.52
CIT-216ENST00000544872 CXCL9Q07325 125 aa11.83□□□□□ -0.52
CIT-216ENST00000544872 SREBF2Q12772 1141 aa11.83□□□□□ -0.52
CIT-216ENST00000544872 SLC9C1Q4G0N8 1177 aa11.83□□□□□ -0.52
CIT-216ENST00000544872 LDHAL6AQ6ZMR3 332 aa11.83□□□□□ -0.52
CIT-216ENST00000544872 C3orf67Q6ZVT6 689 aa11.83□□□□□ -0.52
CIT-216ENST00000544872 TMEM57Q8N5G2 664 aa11.83□□□□□ -0.52
CIT-216ENST00000544872 ERO1AQ96HE7 468 aa11.83□□□□□ -0.52
CIT-216ENST00000544872 ZNF333Q96JL9 665 aa11.83□□□□□ -0.52
CIT-216ENST00000544872 ZC3H12CQ9C0D7 883 aaKnown RBP11.83□□□□□ -0.52
CIT-216ENST00000544872 GREM2Q9H772 168 aa11.83□□□□□ -0.52
CIT-216ENST00000544872 BSDC1Q9NW68 430 aaPredicted RBP11.83□□□□□ -0.52
CIT-216ENST00000544872 CNOT7Q9UIV1 285 aaKnown RBP11.83□□□□□ -0.52
CIT-216ENST00000544872 RPTORQ8N122 1335 aa11.83□□□□□ -0.52
CIT-216ENST00000544872 CASP7P55210 303 aa11.82□□□□□ -0.52
CIT-216ENST00000544872 MAP3K12Q12852 859 aa11.82□□□□□ -0.52
CIT-216ENST00000544872 SULF1Q8IWU6 871 aa11.82□□□□□ -0.52
CIT-216ENST00000544872 SUCLG2Q96I99 432 aa11.82□□□□□ -0.52
CIT-216ENST00000544872 BICC1Q9H694 974 aaKnown RBP11.82□□□□□ -0.52
CIT-216ENST00000544872 EFCC1Q9HA90 598 aa11.82□□□□□ -0.52
CIT-216ENST00000544872 STAP2Q9UGK3 403 aa11.82□□□□□ -0.52
CIT-216ENST00000544872 GGA1Q9UJY5 639 aa11.82□□□□□ -0.52
CIT-216ENST00000544872 RTL9Q8NET4 1388 aa11.81□□□□□ -0.52
CIT-216ENST00000544872 LAMA3Q16787 3333 aa11.81□□□□□ -0.52
CIT-216ENST00000544872 ATP2B4P23634 1241 aa11.81□□□□□ -0.52
CIT-216ENST00000544872 TM4SF4P48230 202 aa11.81□□□□□ -0.52
CIT-216ENST00000544872 FOXO4P98177 505 aa11.81□□□□□ -0.52
CIT-216ENST00000544872 AOC3Q16853 763 aa11.81□□□□□ -0.52
CIT-216ENST00000544872 MICALL2Q8IY33 904 aa11.81□□□□□ -0.52
CIT-216ENST00000544872 CELF1Q92879 486 aaKnown RBP11.81□□□□□ -0.52
CIT-216ENST00000544872 SEC31BQ9NQW1 1179 aa11.81□□□□□ -0.52
CIT-216ENST00000544872 SHTN1A0MZ66 631 aa11.8□□□□□ -0.52
CIT-216ENST00000544872 TNFRSF10AO00220 468 aa11.8□□□□□ -0.52
CIT-216ENST00000544872 ZBTB7BO15156 539 aaPredicted RBP11.8□□□□□ -0.52
CIT-216ENST00000544872 HMMRO75330 724 aa11.8□□□□□ -0.52
CIT-216ENST00000544872 MVPQ14764 893 aaKnown RBP11.8□□□□□ -0.52
CIT-216ENST00000544872 TNIP1Q15025 636 aa11.8□□□□□ -0.52
CIT-216ENST00000544872 WASHC4Q2M389 1173 aa11.8□□□□□ -0.52
CIT-216ENST00000544872 TBC1D10BQ4KMP7 808 aaPredicted RBP11.8□□□□□ -0.52
CIT-216ENST00000544872 RBM26Q5T8P6 1007 aaKnown RBP11.8□□□□□ -0.52
CIT-216ENST00000544872 CD99L2Q8TCZ2 262 aa11.8□□□□□ -0.52
CIT-216ENST00000544872 FBXO3Q9UK99 471 aa11.8□□□□□ -0.52
CIT-216ENST00000544872 ZNRF3Q9ULT6 936 aa11.8□□□□□ -0.52
CIT-216ENST00000544872 LEMD3Q9Y2U8 911 aa11.8□□□□□ -0.52
CIT-216ENST00000544872 LRRFIP2Q9Y608 721 aaKnown RBP11.8□□□□□ -0.52
CIT-216ENST00000544872 XDHP47989 1333 aa11.8□□□□□ -0.52
CIT-216ENST00000544872 CENPFP49454 3210 aa11.8□□□□□ -0.52
CIT-216ENST00000544872 SRGAP3O43295 1099 aa11.79□□□□□ -0.52
CIT-216ENST00000544872 PLIN1O60240 522 aa11.79□□□□□ -0.52
CIT-216ENST00000544872 RAD17O75943 681 aa11.79□□□□□ -0.52
CIT-216ENST00000544872 ALDH1A1P00352 501 aa11.79□□□□□ -0.52
CIT-216ENST00000544872 CENPBP07199 599 aaPredicted RBP11.79□□□□□ -0.52
CIT-216ENST00000544872 RABL6Q3YEC7 729 aaPredicted RBP11.79□□□□□ -0.52
CIT-216ENST00000544872 SAMD7Q7Z3H4 446 aa11.79□□□□□ -0.52
CIT-216ENST00000544872 PANK1Q8TE04 598 aa11.79□□□□□ -0.52
CIT-216ENST00000544872 CDCA5Q96FF9 252 aa11.79□□□□□ -0.52
CIT-216ENST00000544872 MEIS3Q99687 375 aa11.79□□□□□ -0.52
CIT-216ENST00000544872 MROH5Q6ZUA9 1318 aa11.79□□□□□ -0.52
CIT-216ENST00000544872 UFL1O94874 794 aa11.78□□□□□ -0.52
CIT-216ENST00000544872 G3BP1Q13283 466 aaKnown RBP eCLIP11.78□□□□□ -0.52
CIT-216ENST00000544872 OS9Q13438 667 aaPredicted RBP11.78□□□□□ -0.52
CIT-216ENST00000544872 METTL24Q5JXM2 366 aa11.78□□□□□ -0.52
CIT-216ENST00000544872 CFHR5Q9BXR6 569 aa11.78□□□□□ -0.52
CIT-216ENST00000544872 PODXL2Q9NZ53 605 aa11.78□□□□□ -0.52
CIT-216ENST00000544872 MINPP1Q9UNW1 487 aa11.78□□□□□ -0.52
CIT-216ENST00000544872 COG6Q9Y2V7 657 aa11.78□□□□□ -0.52
CIT-216ENST00000544872 HTTP42858 3142 aa11.77□□□□□ -0.53
CIT-216ENST00000544872 EVI5O60447 810 aa11.77□□□□□ -0.53
CIT-216ENST00000544872 RRP1P56182 461 aaKnown RBP11.77□□□□□ -0.53
CIT-216ENST00000544872 FKBP1BP68106 108 aa11.77□□□□□ -0.53
CIT-216ENST00000544872 AAMPQ13685 434 aa11.77□□□□□ -0.53
CIT-216ENST00000544872 TTLL12Q14166 644 aaPredicted RBP11.77□□□□□ -0.53
CIT-216ENST00000544872 HSP90AB4PQ58FF6 505 aa11.77□□□□□ -0.53
CIT-216ENST00000544872 VPS37DQ86XT2 251 aa11.77□□□□□ -0.53
CIT-216ENST00000544872 RTFDC1Q9BY42 306 aaPredicted RBP11.77□□□□□ -0.53
CIT-216ENST00000544872 CEP126Q9P2H0 1117 aa11.77□□□□□ -0.53
CIT-216ENST00000544872 ZBTB47Q9UFB7 747 aaPredicted RBP11.77□□□□□ -0.53
CIT-216ENST00000544872 ZBTB12Q9Y330 459 aaPredicted RBP11.77□□□□□ -0.53
CIT-216ENST00000544872 UBE2Q2LH0YL09 131 aa11.76□□□□□ -0.53
CIT-216ENST00000544872 IL15P40933 162 aaPredicted RBP11.76□□□□□ -0.53
CIT-216ENST00000544872 GPSM2P81274 684 aa11.76□□□□□ -0.53
CIT-216ENST00000544872 CAVIN4Q5BKX8 364 aa11.76□□□□□ -0.53
CIT-216ENST00000544872 EPHA10Q5JZY3 1008 aa11.76□□□□□ -0.53
CIT-216ENST00000544872 RPAP2Q8IXW5 612 aaPredicted RBP11.76□□□□□ -0.53
CIT-216ENST00000544872 TBC1D16Q8TBP0 767 aa11.76□□□□□ -0.53
CIT-216ENST00000544872 AKAP2Q9Y2D5 859 aa11.76□□□□□ -0.53
CIT-216ENST00000544872 IRS2Q9Y4H2 1338 aa11.76□□□□□ -0.53
CIT-216ENST00000544872 RIMBP2O15034 1052 aa11.75□□□□□ -0.53
CIT-216ENST00000544872 FRAT2O75474 233 aaPredicted RBP11.75□□□□□ -0.53
CIT-216ENST00000544872 CIAO1O76071 339 aa11.75□□□□□ -0.53
CIT-216ENST00000544872 IFIT1P09914 478 aaKnown RBP11.75□□□□□ -0.53
CIT-216ENST00000544872 CHRNDQ07001 517 aa11.75□□□□□ -0.53
CIT-216ENST00000544872 KIAA2012Q0VF49 1180 aa11.75□□□□□ -0.53
CIT-216ENST00000544872 MOB2Q70IA6 237 aa11.75□□□□□ -0.53
CIT-216ENST00000544872 ANKRD44Q8N8A2 993 aa11.75□□□□□ -0.53
CIT-216ENST00000544872 GGA3Q9NZ52 723 aa11.75□□□□□ -0.53
CIT-216ENST00000544872 POLR2AP24928 1970 aaKnown RBP11.75□□□□□ -0.53
CIT-216ENST00000544872 ZNF804BA4D1E1 1349 aa11.75□□□□□ -0.53
CIT-216ENST00000544872 NUP98P52948 1817 aa11.74□□□□□ -0.53
CIT-216ENST00000544872 PIEZO1Q92508 2521 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms