RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 HSP90B1P14625 803 aaKnown RBP8.3□□□□□ -1.08
CDCA3-209ENST00000544610 ZNF280AP59817 542 aaPredicted RBP8.3□□□□□ -1.08
CDCA3-209ENST00000544610 DGKZQ13574 1117 aa8.3□□□□□ -1.08
CDCA3-209ENST00000544610 ZKSCAN2Q63HK3 967 aa8.3□□□□□ -1.08
CDCA3-209ENST00000544610 SSH1Q8WYL5 1049 aa8.3□□□□□ -1.08
CDCA3-209ENST00000544610 CCDC102AQ96A19 550 aa8.3□□□□□ -1.08
CDCA3-209ENST00000544610 STK31Q9BXU1 1019 aa8.3□□□□□ -1.08
CDCA3-209ENST00000544610 ZC3H12CQ9C0D7 883 aaKnown RBP8.3□□□□□ -1.08
CDCA3-209ENST00000544610 SEC31BQ9NQW1 1179 aa8.3□□□□□ -1.08
CDCA3-209ENST00000544610 SMC4Q9NTJ3 1288 aa8.3□□□□□ -1.08
CDCA3-209ENST00000544610 GGA3Q9NZ52 723 aa8.3□□□□□ -1.08
CDCA3-209ENST00000544610 GGA1Q9UJY5 639 aa8.3□□□□□ -1.08
CDCA3-209ENST00000544610 TNRC18O15417 2968 aaPredicted RBP8.3□□□□□ -1.08
CDCA3-209ENST00000544610 PCCAP05165 728 aaPredicted RBP8.29□□□□□ -1.08
CDCA3-209ENST00000544610 SLC10A3P09131 477 aa8.29□□□□□ -1.08
CDCA3-209ENST00000544610 TIE1P35590 1138 aa8.29□□□□□ -1.08
CDCA3-209ENST00000544610 ZNF157P51786 506 aaPredicted RBP8.29□□□□□ -1.08
CDCA3-209ENST00000544610 KIF23Q02241 960 aaPredicted RBP8.29□□□□□ -1.08
CDCA3-209ENST00000544610 CCDC152Q4G0S7 254 aa8.29□□□□□ -1.08
CDCA3-209ENST00000544610 RBM26Q5T8P6 1007 aaKnown RBP8.29□□□□□ -1.08
CDCA3-209ENST00000544610 RSBN1LQ6PCB5 846 aaPredicted RBP8.29□□□□□ -1.08
CDCA3-209ENST00000544610 ATF7IPQ6VMQ6 1270 aa8.29□□□□□ -1.08
CDCA3-209ENST00000544610 RIC3Q7Z5B4 369 aa8.29□□□□□ -1.08
CDCA3-209ENST00000544610 SULF1Q8IWU6 871 aa8.29□□□□□ -1.08
CDCA3-209ENST00000544610 MRPL50Q8N5N7 158 aaKnown RBP8.29□□□□□ -1.08
CDCA3-209ENST00000544610 TSPYL6Q8N831 410 aa8.29□□□□□ -1.08
CDCA3-209ENST00000544610 CCDC191Q8NCU4 936 aa8.29□□□□□ -1.08
CDCA3-209ENST00000544610 AGBL3Q8NEM8 1001 aa8.29□□□□□ -1.08
CDCA3-209ENST00000544610 CDCA5Q96FF9 252 aa8.29□□□□□ -1.08
CDCA3-209ENST00000544610 MYD88Q99836 296 aa8.29□□□□□ -1.08
CDCA3-209ENST00000544610 API5Q9BZZ5 524 aaKnown RBP8.29□□□□□ -1.08
CDCA3-209ENST00000544610 PHAXQ9H814 394 aaKnown RBP8.29□□□□□ -1.08
CDCA3-209ENST00000544610 ANKIB1Q9P2G1 1089 aa8.29□□□□□ -1.08
CDCA3-209ENST00000544610 SCN9AQ15858 1988 aa8.29□□□□□ -1.08
CDCA3-209ENST00000544610 PSME4Q14997 1843 aa8.29□□□□□ -1.08
CDCA3-209ENST00000544610 ASTN2O75129 1339 aaPredicted RBP8.29□□□□□ -1.08
CDCA3-209ENST00000544610 PAPPA2Q9BXP8 1791 aa8.28□□□□□ -1.08
CDCA3-209ENST00000544610 PDE8AO60658 829 aa8.28□□□□□ -1.08
CDCA3-209ENST00000544610 FKBP1BP68106 108 aa8.28□□□□□ -1.08
CDCA3-209ENST00000544610 ANGEL2Q5VTE6 544 aaKnown RBP8.28□□□□□ -1.08
CDCA3-209ENST00000544610 GMLQ99445 158 aa8.28□□□□□ -1.08
CDCA3-209ENST00000544610 CWC25Q9NXE8 425 aaPredicted RBP8.28□□□□□ -1.08
CDCA3-209ENST00000544610 RNF186Q9NXI6 227 aa8.28□□□□□ -1.08
CDCA3-209ENST00000544610 XDHP47989 1333 aa8.28□□□□□ -1.08
CDCA3-209ENST00000544610 PITPNM2Q9BZ72 1349 aa8.28□□□□□ -1.08
CDCA3-209ENST00000544610 G3V3G9 751 aa8.27□□□□□ -1.09
CDCA3-209ENST00000544610 BCAR3O75815 825 aa8.27□□□□□ -1.09
CDCA3-209ENST00000544610 SCARF1Q14162 830 aa8.27□□□□□ -1.09
CDCA3-209ENST00000544610 PODNQ7Z5L7 613 aa8.27□□□□□ -1.09
CDCA3-209ENST00000544610 RASAL3Q86YV0 1011 aa8.27□□□□□ -1.09
CDCA3-209ENST00000544610 ANKRD18AQ8IVF6 992 aa8.27□□□□□ -1.09
CDCA3-209ENST00000544610 CSRNP1Q96S65 589 aa8.27□□□□□ -1.09
CDCA3-209ENST00000544610 METTL22Q9BUU2 404 aaPredicted RBP8.27□□□□□ -1.09
CDCA3-209ENST00000544610 KRTAP3-3Q9BYR6 98 aa8.27□□□□□ -1.09
CDCA3-209ENST00000544610 KRTAP3-2Q9BYR7 98 aa8.27□□□□□ -1.09
CDCA3-209ENST00000544610 MYOZ2Q9NPC6 264 aa8.27□□□□□ -1.09
CDCA3-209ENST00000544610 ZNF646O15015 1829 aaPredicted RBP8.26□□□□□ -1.09
CDCA3-209ENST00000544610 MED23Q9ULK4 1368 aa8.26□□□□□ -1.09
CDCA3-209ENST00000544610 USP17L3A6NCW0 530 aa8.26□□□□□ -1.09
CDCA3-209ENST00000544610 USP17L4A6NCW7 530 aa8.26□□□□□ -1.09
CDCA3-209ENST00000544610 ELL2O00472 640 aaPredicted RBP8.26□□□□□ -1.09
CDCA3-209ENST00000544610 TRPA1O75762 1119 aa8.26□□□□□ -1.09
CDCA3-209ENST00000544610 DDX58O95786 925 aaKnown RBP8.26□□□□□ -1.09
CDCA3-209ENST00000544610 USP17L8P0C7I0 530 aa8.26□□□□□ -1.09
CDCA3-209ENST00000544610 ATP2B4P23634 1241 aa8.26□□□□□ -1.09
CDCA3-209ENST00000544610 CTSWP56202 376 aa8.26□□□□□ -1.09
CDCA3-209ENST00000544610 IER5LQ5T953 404 aa8.26□□□□□ -1.09
CDCA3-209ENST00000544610 INTS3Q68E01 1043 aaKnown RBP8.26□□□□□ -1.09
CDCA3-209ENST00000544610 USP17L1Q7RTZ2 530 aa8.26□□□□□ -1.09
CDCA3-209ENST00000544610 DZIP1LQ8IYY4 767 aaKnown RBP8.26□□□□□ -1.09
CDCA3-209ENST00000544610 CCDC85AQ96PX6 553 aaPredicted RBP8.26□□□□□ -1.09
CDCA3-209ENST00000544610 CASP8AP2Q9UKL3 1982 aa8.26□□□□□ -1.09
CDCA3-209ENST00000544610 IGKV5-2P06315 115 aa8.25□□□□□ -1.09
CDCA3-209ENST00000544610 TRIM27P14373 513 aa8.25□□□□□ -1.09
CDCA3-209ENST00000544610 ZNF467Q7Z7K2 595 aaPredicted RBP8.25□□□□□ -1.09
CDCA3-209ENST00000544610 FTSJ3Q8IY81 847 aaKnown RBP8.25□□□□□ -1.09
CDCA3-209ENST00000544610 JARID2Q92833 1246 aaPredicted RBP8.25□□□□□ -1.09
CDCA3-209ENST00000544610 CDC5LQ99459 802 aaKnown RBP8.25□□□□□ -1.09
CDCA3-209ENST00000544610 BSDC1Q9NW68 430 aaPredicted RBP8.25□□□□□ -1.09
CDCA3-209ENST00000544610 DDX19BQ9UMR2 479 aa8.25□□□□□ -1.09
CDCA3-209ENST00000544610 HDAC5Q9UQL6 1122 aa8.25□□□□□ -1.09
CDCA3-209ENST00000544610 MAP3K2Q9Y2U5 619 aa8.25□□□□□ -1.09
CDCA3-209ENST00000544610 WTIPA6NIX2 430 aaPredicted RBP8.24□□□□□ -1.09
CDCA3-209ENST00000544610 CCT4P50991 539 aaKnown RBP8.24□□□□□ -1.09
CDCA3-209ENST00000544610 FLIIQ13045 1269 aa8.24□□□□□ -1.09
CDCA3-209ENST00000544610 MVPQ14764 893 aaKnown RBP8.24□□□□□ -1.09
CDCA3-209ENST00000544610 DACT2Q5SW24 774 aa8.24□□□□□ -1.09
CDCA3-209ENST00000544610 KSR2Q6VAB6 950 aa8.24□□□□□ -1.09
CDCA3-209ENST00000544610 CTU1Q7Z7A3 348 aaKnown RBP8.24□□□□□ -1.09
CDCA3-209ENST00000544610 TTLL11Q8NHH1 800 aa8.24□□□□□ -1.09
CDCA3-209ENST00000544610 GREM2Q9H772 168 aa8.24□□□□□ -1.09
CDCA3-209ENST00000544610 PPP4R2Q9NY27 417 aa8.24□□□□□ -1.09
CDCA3-209ENST00000544610 NOB1Q9ULX3 412 aaKnown RBP8.24□□□□□ -1.09
CDCA3-209ENST00000544610 MINPP1Q9UNW1 487 aa8.24□□□□□ -1.09
CDCA3-209ENST00000544610 MYO3BQ8WXR4 1341 aa8.24□□□□□ -1.09
CDCA3-209ENST00000544610 PI4KAP2A4QPH2 592 aa8.23□□□□□ -1.09
CDCA3-209ENST00000544610 WNT10BO00744 389 aa8.23□□□□□ -1.09
CDCA3-209ENST00000544610 SOX10P56693 466 aa8.23□□□□□ -1.09
CDCA3-209ENST00000544610 NBPF9Q3BBW0 867 aa8.23□□□□□ -1.09
CDCA3-209ENST00000544610 STRIP1Q5VSL9 837 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms