RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 SAPCD2Q86UD0 394 aa5.6□□□□□ -1.51
SNHG1-220ENST00000544550 TESK2Q96S53 571 aa5.6□□□□□ -1.51
SNHG1-220ENST00000544550 SETDB2Q96T68 719 aa5.6□□□□□ -1.51
SNHG1-220ENST00000544550 ANKRD26Q9UPS8 1709 aa5.6□□□□□ -1.51
SNHG1-220ENST00000544550 ADAMTS7Q9UKP4 1686 aa5.59□□□□□ -1.51
SNHG1-220ENST00000544550 CELF2O95319 508 aaKnown RBP5.59□□□□□ -1.51
SNHG1-220ENST00000544550 ADH1BP00325 375 aa5.59□□□□□ -1.51
SNHG1-220ENST00000544550 NPR1P16066 1061 aa5.59□□□□□ -1.51
SNHG1-220ENST00000544550 NEUROD1Q13562 356 aa5.59□□□□□ -1.51
SNHG1-220ENST00000544550 PKN2Q16513 984 aaKnown RBP5.59□□□□□ -1.51
SNHG1-220ENST00000544550 HABP4Q5JVS0 413 aaKnown RBP5.59□□□□□ -1.51
SNHG1-220ENST00000544550 TBC1D9BQ66K14 1250 aa5.59□□□□□ -1.51
SNHG1-220ENST00000544550 CIAPIN1Q6FI81 312 aa5.59□□□□□ -1.51
SNHG1-220ENST00000544550 CTU1Q7Z7A3 348 aaKnown RBP5.59□□□□□ -1.51
SNHG1-220ENST00000544550 ZNF277Q9NRM2 450 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-220ENST00000544550 SERPINA10Q9UK55 444 aa5.59□□□□□ -1.51
SNHG1-220ENST00000544550 TJP1Q07157 1748 aa5.59□□□□□ -1.51
SNHG1-220ENST00000544550 DICER1Q9UPY3 1922 aaKnown RBP5.58□□□□□ -1.52
SNHG1-220ENST00000544550 FER1L6Q2WGJ9 1857 aa5.58□□□□□ -1.52
SNHG1-220ENST00000544550 TLL1O43897 1013 aa5.58□□□□□ -1.52
SNHG1-220ENST00000544550 CANXP27824 592 aaKnown RBP5.58□□□□□ -1.52
SNHG1-220ENST00000544550 ALDH1B1P30837 517 aa5.58□□□□□ -1.52
SNHG1-220ENST00000544550 EIF5P55010 431 aaKnown RBP5.58□□□□□ -1.52
SNHG1-220ENST00000544550 CC2D2BQ6DHV5 1058 aa5.58□□□□□ -1.52
SNHG1-220ENST00000544550 SYNE4Q8N205 404 aa5.58□□□□□ -1.52
SNHG1-220ENST00000544550 C7orf43Q8WVR3 580 aa5.58□□□□□ -1.52
SNHG1-220ENST00000544550 GLMNQ92990 594 aa5.58□□□□□ -1.52
SNHG1-220ENST00000544550 CCDC97Q96F63 343 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-220ENST00000544550 SIN3AQ96ST3 1273 aa5.58□□□□□ -1.52
SNHG1-220ENST00000544550 PSMD1Q99460 953 aa5.58□□□□□ -1.52
SNHG1-220ENST00000544550 TEX13AQ9BXU3 409 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-220ENST00000544550 SLC52A2Q9HAB3 445 aa5.58□□□□□ -1.52
SNHG1-220ENST00000544550 ADARB2Q9NS39 739 aaKnown RBP5.58□□□□□ -1.52
SNHG1-220ENST00000544550 EVA1BQ9NVM1 165 aa5.58□□□□□ -1.52
SNHG1-220ENST00000544550 MAP10Q9P2G4 905 aa5.58□□□□□ -1.52
SNHG1-220ENST00000544550 POLKQ9UBT6 870 aa5.58□□□□□ -1.52
SNHG1-220ENST00000544550 GJA3Q9Y6H8 435 aa5.58□□□□□ -1.52
SNHG1-220ENST00000544550 TRAF5O00463 557 aa5.57□□□□□ -1.52
SNHG1-220ENST00000544550 CCNYL3P0C7X3 344 aa5.57□□□□□ -1.52
SNHG1-220ENST00000544550 SCNN1DP51172 638 aa5.57□□□□□ -1.52
SNHG1-220ENST00000544550 VAC14Q08AM6 782 aa5.57□□□□□ -1.52
SNHG1-220ENST00000544550 TTC5Q8N0Z6 440 aa5.57□□□□□ -1.52
SNHG1-220ENST00000544550 PNMA1Q8ND90 353 aa5.57□□□□□ -1.52
SNHG1-220ENST00000544550 ADAMTS19Q8TE59 1207 aa5.57□□□□□ -1.52
SNHG1-220ENST00000544550 ZNF516Q92618 1163 aa5.57□□□□□ -1.52
SNHG1-220ENST00000544550 CALR3Q96L12 384 aaKnown RBP5.57□□□□□ -1.52
SNHG1-220ENST00000544550 PRDM9Q9NQV7 894 aa5.57□□□□□ -1.52
SNHG1-220ENST00000544550 FKBPLQ9UIM3 349 aa5.57□□□□□ -1.52
SNHG1-220ENST00000544550 AFDNP55196 1824 aaKnown RBP5.57□□□□□ -1.52
SNHG1-220ENST00000544550 MYH14Q7Z406 1995 aaKnown RBP5.56□□□□□ -1.52
SNHG1-220ENST00000544550 CDHR2Q9BYE9 1310 aa5.56□□□□□ -1.52
SNHG1-220ENST00000544550 KIF20BQ96Q89 1820 aa5.56□□□□□ -1.52
SNHG1-220ENST00000544550 KLRG2A4D1S0 409 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-220ENST00000544550 IL6STP40189 918 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-220ENST00000544550 SLC19A1P41440 591 aa5.56□□□□□ -1.52
SNHG1-220ENST00000544550 EPS15P42566 896 aa5.56□□□□□ -1.52
SNHG1-220ENST00000544550 FMR1Q06787 632 aaKnown RBP eCLIP5.56□□□□□ -1.52
SNHG1-220ENST00000544550 KCNH2Q12809 1159 aa5.56□□□□□ -1.52
SNHG1-220ENST00000544550 HDGFL1Q5TGJ6 251 aa5.56□□□□□ -1.52
SNHG1-220ENST00000544550 CLEC4GQ6UXB4 293 aa5.56□□□□□ -1.52
SNHG1-220ENST00000544550 NBPF5PQ86XG9 351 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-220ENST00000544550 CCDC24Q8N4L8 307 aa5.56□□□□□ -1.52
SNHG1-220ENST00000544550 NUDT12Q9BQG2 462 aa5.56□□□□□ -1.52
SNHG1-220ENST00000544550 ALG2Q9H553 416 aa5.56□□□□□ -1.52
SNHG1-220ENST00000544550 ZNF408Q9H9D4 720 aa5.56□□□□□ -1.52
SNHG1-220ENST00000544550 ZNF652Q9Y2D9 606 aa5.56□□□□□ -1.52
SNHG1-220ENST00000544550 COL11A2P13942 1736 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-220ENST00000544550 CTHP32929 405 aa5.55□□□□□ -1.52
SNHG1-220ENST00000544550 SOX11P35716 441 aa5.55□□□□□ -1.52
SNHG1-220ENST00000544550 HUNKP57058 714 aa5.55□□□□□ -1.52
SNHG1-220ENST00000544550 SLC39A6Q13433 755 aa5.55□□□□□ -1.52
SNHG1-220ENST00000544550 RGMBQ6NW40 437 aa5.55□□□□□ -1.52
SNHG1-220ENST00000544550 TPTE2Q6XPS3 522 aa5.55□□□□□ -1.52
SNHG1-220ENST00000544550 CDC37L1Q7L3B6 337 aa5.55□□□□□ -1.52
SNHG1-220ENST00000544550 ZNF598Q86UK7 904 aaKnown RBP5.55□□□□□ -1.52
SNHG1-220ENST00000544550 NIM1KQ8IY84 436 aa5.55□□□□□ -1.52
SNHG1-220ENST00000544550 LARGE2Q8N3Y3 721 aa5.55□□□□□ -1.52
SNHG1-220ENST00000544550 CARD14Q9BXL6 1004 aa5.55□□□□□ -1.52
SNHG1-220ENST00000544550 SLC6A16Q9GZN6 736 aa5.55□□□□□ -1.52
SNHG1-220ENST00000544550 TMX4Q9H1E5 349 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-220ENST00000544550 VPS33BQ9H267 617 aa5.55□□□□□ -1.52
SNHG1-220ENST00000544550 GPRC5DQ9NZD1 345 aa5.55□□□□□ -1.52
SNHG1-220ENST00000544550 HDAC9Q9UKV0 1011 aa5.55□□□□□ -1.52
SNHG1-220ENST00000544550 MRC1P22897 1456 aa5.55□□□□□ -1.52
SNHG1-220ENST00000544550 CCDC88AQ3V6T2 1871 aa5.55□□□□□ -1.52
SNHG1-220ENST00000544550 SCN7AQ01118 1682 aa5.54□□□□□ -1.52
SNHG1-220ENST00000544550 FAM187AA6NFU0 413 aa5.54□□□□□ -1.52
SNHG1-220ENST00000544550 RNMTO43148 476 aaKnown RBP5.54□□□□□ -1.52
SNHG1-220ENST00000544550 TRPA1O75762 1119 aa5.54□□□□□ -1.52
SNHG1-220ENST00000544550 CAMTA2O94983 1202 aa5.54□□□□□ -1.52
SNHG1-220ENST00000544550 NR1H3Q13133 447 aa5.54□□□□□ -1.52
SNHG1-220ENST00000544550 SULT6B1Q6IMI4 303 aa5.54□□□□□ -1.52
SNHG1-220ENST00000544550 TRIM67Q6ZTA4 783 aa5.54□□□□□ -1.52
SNHG1-220ENST00000544550 C2orf69Q8N8R5 385 aa5.54□□□□□ -1.52
SNHG1-220ENST00000544550 ARMC2Q8NEN0 867 aa5.54□□□□□ -1.52
SNHG1-220ENST00000544550 RNF186Q9NXI6 227 aa5.54□□□□□ -1.52
SNHG1-220ENST00000544550 PGAP2Q9UHJ9 254 aa5.54□□□□□ -1.52
SNHG1-220ENST00000544550 ARFGEF2Q9Y6D5 1785 aa5.54□□□□□ -1.52
SNHG1-220ENST00000544550 BCORQ6W2J9 1755 aa5.53□□□□□ -1.52
SNHG1-220ENST00000544550 ZBBXA8MT70 800 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms