RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 LDHAL6AQ6ZMR3 332 aa34.82■■■■□ 3.16
PDCD2-211ENST00000544336 CNNM1Q9NRU3 951 aa34.82■■■■□ 3.16
PDCD2-211ENST00000544336 SRCIN1Q9C0H9 1055 aa34.8■■■■□ 3.16
PDCD2-211ENST00000544336 PCDHAC2Q9Y5I4 1007 aa34.8■■■■□ 3.16
PDCD2-211ENST00000544336 ECM29Q5VYK3 1845 aa34.8■■■■□ 3.16
PDCD2-211ENST00000544336 ALDH1L1O75891 902 aa34.79■■■■□ 3.16
PDCD2-211ENST00000544336 IL1R1P14778 569 aa34.79■■■■□ 3.16
PDCD2-211ENST00000544336 RGS19P49795 217 aa34.78■■■■□ 3.16
PDCD2-211ENST00000544336 PTPN12Q05209 780 aaKnown RBP34.78■■■■□ 3.16
PDCD2-211ENST00000544336 ARMC9Q7Z3E5 817 aa34.78■■■■□ 3.16
PDCD2-211ENST00000544336 FZD1Q9UP38 647 aa34.78■■■■□ 3.16
PDCD2-211ENST00000544336 ZBTB4Q9P1Z0 1013 aaPredicted RBP34.77■■■■□ 3.16
PDCD2-211ENST00000544336 SUCLG2Q96I99 432 aa34.76■■■■□ 3.16
PDCD2-211ENST00000544336 ANGEL1Q9UNK9 670 aaKnown RBP34.76■■■■□ 3.16
PDCD2-211ENST00000544336 TBC1D8O95759 1140 aa34.75■■■■□ 3.15
PDCD2-211ENST00000544336 CFAP100Q494V2 611 aa34.75■■■■□ 3.15
PDCD2-211ENST00000544336 DEFB129Q9H1M3 183 aa34.75■■■■□ 3.15
PDCD2-211ENST00000544336 CLRN2A0PK11 232 aa34.74■■■■□ 3.15
PDCD2-211ENST00000544336 COL1A1P02452 1464 aaPredicted RBP34.73■■■■□ 3.15
PDCD2-211ENST00000544336 CTU1Q7Z7A3 348 aaKnown RBP34.73■■■■□ 3.15
PDCD2-211ENST00000544336 MTMR14Q8NCE2 650 aa34.73■■■■□ 3.15
PDCD2-211ENST00000544336 PUS3Q9BZE2 481 aaKnown RBP34.73■■■■□ 3.15
PDCD2-211ENST00000544336 MYO1BO43795 1136 aa34.71■■■■□ 3.15
PDCD2-211ENST00000544336 NBPF7P0C2Y1 421 aaPredicted RBP34.71■■■■□ 3.15
PDCD2-211ENST00000544336 RBM5P52756 815 aaKnown RBP eCLIP34.71■■■■□ 3.15
PDCD2-211ENST00000544336 KAZALD1Q96I82 304 aa34.71■■■■□ 3.15
PDCD2-211ENST00000544336 VEZTQ9HBM0 779 aa34.71■■■■□ 3.15
PDCD2-211ENST00000544336 SPDYE2BA6NHP3 402 aa34.7■■■■□ 3.15
PDCD2-211ENST00000544336 SPDYE6P0CI01 402 aa34.7■■■■□ 3.15
PDCD2-211ENST00000544336 GYG1P46976 350 aa34.7■■■■□ 3.15
PDCD2-211ENST00000544336 TM4SF4P48230 202 aa34.7■■■■□ 3.15
PDCD2-211ENST00000544336 FKBP1AP62942 108 aaKnown RBP34.7■■■■□ 3.15
PDCD2-211ENST00000544336 PRMT6Q96LA8 375 aaPredicted RBP34.7■■■■□ 3.15
PDCD2-211ENST00000544336 AOX1Q06278 1338 aa34.7■■■■□ 3.15
PDCD2-211ENST00000544336 ZNF521Q96K83 1311 aa34.7■■■■□ 3.15
PDCD2-211ENST00000544336 LDLRAD1Q5T700 205 aa34.69■■■■□ 3.14
PDCD2-211ENST00000544336 SSC5DA1L4H1 1573 aa34.68■■■■□ 3.14
PDCD2-211ENST00000544336 SREBF2Q12772 1141 aa34.68■■■■□ 3.14
PDCD2-211ENST00000544336 UBE4AQ14139 1066 aa34.68■■■■□ 3.14
PDCD2-211ENST00000544336 ZNF296Q8WUU4 475 aaPredicted RBP34.68■■■■□ 3.14
PDCD2-211ENST00000544336 HIBADHP31937 336 aaKnown RBP34.66■■■■□ 3.14
PDCD2-211ENST00000544336 SOX10P56693 466 aa34.66■■■■□ 3.14
PDCD2-211ENST00000544336 SPRYD7Q5W111 196 aa34.66■■■■□ 3.14
PDCD2-211ENST00000544336 MRPL50Q8N5N7 158 aaKnown RBP34.66■■■■□ 3.14
PDCD2-211ENST00000544336 BICC1Q9H694 974 aaKnown RBP34.66■■■■□ 3.14
PDCD2-211ENST00000544336 PPP2R3BQ9Y5P8 575 aa34.66■■■■□ 3.14
PDCD2-211ENST00000544336 FAM205AQ6ZU69 1335 aa34.65■■■■□ 3.14
PDCD2-211ENST00000544336 MFSD14BQ5SR56 506 aa34.65■■■■□ 3.14
PDCD2-211ENST00000544336 TDRD7Q8NHU6 1098 aaKnown RBP34.65■■■■□ 3.14
PDCD2-211ENST00000544336 ARAP2Q8WZ64 1704 aa34.64■■■■□ 3.14
PDCD2-211ENST00000544336 UTYO14607 1347 aa34.64■■■■□ 3.14
PDCD2-211ENST00000544336 SLC10A4Q96EP9 437 aa34.64■■■■□ 3.14
PDCD2-211ENST00000544336 CLMNQ96JQ2 1002 aa34.64■■■■□ 3.14
PDCD2-211ENST00000544336 FAM84BQ96KN1 310 aaPredicted RBP34.64■■■■□ 3.14
PDCD2-211ENST00000544336 PPP1R12BO60237 982 aaPredicted RBP34.63■■■■□ 3.13
PDCD2-211ENST00000544336 NBPF12Q5TAG4 269 aaPredicted RBP34.63■■■■□ 3.13
PDCD2-211ENST00000544336 TTF2Q9UNY4 1162 aaKnown RBP34.63■■■■□ 3.13
PDCD2-211ENST00000544336 RIPOR2Q9Y4F9 1068 aa34.63■■■■□ 3.13
PDCD2-211ENST00000544336 GPR25O00155 361 aa34.62■■■■□ 3.13
PDCD2-211ENST00000544336 MROH5Q6ZUA9 1318 aa34.61■■■■□ 3.13
PDCD2-211ENST00000544336 MAP3K11Q16584 847 aa34.61■■■■□ 3.13
PDCD2-211ENST00000544336 SUPT20HL1Q3ZLR7 823 aa34.61■■■■□ 3.13
PDCD2-211ENST00000544336 IQSEC3Q9UPP2 1182 aaPredicted RBP34.61■■■■□ 3.13
PDCD2-211ENST00000544336 RASA3Q14644 834 aa34.6■■■■□ 3.13
PDCD2-211ENST00000544336 LRRC24Q50LG9 513 aa34.6■■■■□ 3.13
PDCD2-211ENST00000544336 ANKRD44Q8N8A2 993 aa34.6■■■■□ 3.13
PDCD2-211ENST00000544336 R3HDMLQ9H3Y0 253 aa34.6■■■■□ 3.13
PDCD2-211ENST00000544336 VPS37DQ86XT2 251 aa34.59■■■■□ 3.13
PDCD2-211ENST00000544336 WNK4Q96J92 1243 aa34.59■■■■□ 3.13
PDCD2-211ENST00000544336 HPS5Q9UPZ3 1129 aa34.59■■■■□ 3.13
PDCD2-211ENST00000544336 RABL6Q3YEC7 729 aaPredicted RBP34.58■■■■□ 3.13
PDCD2-211ENST00000544336 METTL24Q5JXM2 366 aa34.58■■■■□ 3.13
PDCD2-211ENST00000544336 SSH1Q8WYL5 1049 aa34.58■■■■□ 3.13
PDCD2-211ENST00000544336 TDRD3Q9H7E2 651 aaKnown RBP34.58■■■■□ 3.13
PDCD2-211ENST00000544336 ZNF70Q9UC06 446 aaPredicted RBP34.58■■■■□ 3.13
PDCD2-211ENST00000544336 PTPRCP08575 1304 aa34.57■■■■□ 3.13
PDCD2-211ENST00000544336 CHAF1AQ13111 956 aaPredicted RBP34.57■■■■□ 3.12
PDCD2-211ENST00000544336 SERPINA10Q9UK55 444 aa34.57■■■■□ 3.12
PDCD2-211ENST00000544336 MANSC4A6NHS7 340 aaPredicted RBP34.56■■■■□ 3.12
PDCD2-211ENST00000544336 E9PSI1 815 aa34.56■■■■□ 3.12
PDCD2-211ENST00000544336 IREB2P48200 963 aaKnown RBP34.56■■■■□ 3.12
PDCD2-211ENST00000544336 SPDYE2Q495Y8 402 aa34.56■■■■□ 3.12
PDCD2-211ENST00000544336 KLHDC4Q8TBB5 520 aa34.56■■■■□ 3.12
PDCD2-211ENST00000544336 PKN2Q16513 984 aaKnown RBP34.55■■■■□ 3.12
PDCD2-211ENST00000544336 OTOFQ9HC10 1997 aa34.54■■■■□ 3.12
PDCD2-211ENST00000544336 FKTNO75072 461 aa34.54■■■■□ 3.12
PDCD2-211ENST00000544336 USP2O75604 605 aaPredicted RBP34.54■■■■□ 3.12
PDCD2-211ENST00000544336 ZBTB48P10074 688 aaPredicted RBP34.54■■■■□ 3.12
PDCD2-211ENST00000544336 GRIK5Q16478 980 aa34.54■■■■□ 3.12
PDCD2-211ENST00000544336 NOM1Q5C9Z4 860 aaKnown RBP34.54■■■■□ 3.12
PDCD2-211ENST00000544336 FBXO33Q7Z6M2 555 aa34.54■■■■□ 3.12
PDCD2-211ENST00000544336 DZIP1LQ8IYY4 767 aaKnown RBP34.54■■■■□ 3.12
PDCD2-211ENST00000544336 TNRC18O15417 2968 aaPredicted RBP34.54■■■■□ 3.12
PDCD2-211ENST00000544336 FRAT2O75474 233 aaPredicted RBP34.53■■■■□ 3.12
PDCD2-211ENST00000544336 CRKP46108 304 aa34.53■■■■□ 3.12
PDCD2-211ENST00000544336 TNFAIP1Q13829 316 aa34.53■■■■□ 3.12
PDCD2-211ENST00000544336 IFNL1Q8IU54 200 aa34.53■■■■□ 3.12
PDCD2-211ENST00000544336 CFHR5Q9BXR6 569 aa34.53■■■■□ 3.12
PDCD2-211ENST00000544336 LAMB1P07942 1786 aa34.52■■■■□ 3.12
PDCD2-211ENST00000544336 TCP10L2B9ZVM9 353 aa34.52■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms