RNA–Protein interactions for RNA: ENST00000544128.5

SP140-214, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 910 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-214ENST00000544128 LEMD3Q9Y2U8 911 aa11.62□□□□□ -0.55
SP140-214ENST00000544128 LRRC37AA6NMS7 1700 aa11.62□□□□□ -0.55
SP140-214ENST00000544128 ZNF804BA4D1E1 1349 aa11.61□□□□□ -0.55
SP140-214ENST00000544128 SALL3Q9BXA9 1300 aa11.61□□□□□ -0.55
SP140-214ENST00000544128 C6orf229H3BNL8 230 aa11.61□□□□□ -0.55
SP140-214ENST00000544128 UFL1O94874 794 aa11.61□□□□□ -0.55
SP140-214ENST00000544128 PDE1AP54750 535 aa11.61□□□□□ -0.55
SP140-214ENST00000544128 FSTL1Q12841 308 aa11.61□□□□□ -0.55
SP140-214ENST00000544128 DPP8Q6V1X1 898 aaPredicted RBP11.61□□□□□ -0.55
SP140-214ENST00000544128 GPATCH3Q96I76 525 aa11.61□□□□□ -0.55
SP140-214ENST00000544128 GPR101Q96P66 508 aaPredicted RBP11.61□□□□□ -0.55
SP140-214ENST00000544128 PODXL2Q9NZ53 605 aa11.61□□□□□ -0.55
SP140-214ENST00000544128 STAP2Q9UGK3 403 aa11.61□□□□□ -0.55
SP140-214ENST00000544128 BCS1LQ9Y276 419 aa11.61□□□□□ -0.55
SP140-214ENST00000544128 CCDC158Q5M9N0 1113 aa11.6□□□□□ -0.55
SP140-214ENST00000544128 TTC39AQ5SRH9 613 aa11.6□□□□□ -0.55
SP140-214ENST00000544128 CC2D2BQ6DHV5 1058 aa11.6□□□□□ -0.55
SP140-214ENST00000544128 ZNF467Q7Z7K2 595 aaPredicted RBP11.6□□□□□ -0.55
SP140-214ENST00000544128 TBC1D16Q8TBP0 767 aa11.6□□□□□ -0.55
SP140-214ENST00000544128 ECHDC1Q9NTX5 307 aa11.6□□□□□ -0.55
SP140-214ENST00000544128 POLLQ9UGP5 575 aa11.6□□□□□ -0.55
SP140-214ENST00000544128 BRCA1P38398 1863 aaKnown RBP11.59□□□□□ -0.55
SP140-214ENST00000544128 KLRK1P26718 216 aa11.59□□□□□ -0.55
SP140-214ENST00000544128 GYG1P46976 350 aa11.59□□□□□ -0.55
SP140-214ENST00000544128 BCAMP50895 628 aa11.59□□□□□ -0.55
SP140-214ENST00000544128 CCDC93Q567U6 631 aa11.59□□□□□ -0.55
SP140-214ENST00000544128 TXNRD3Q86VQ6 643 aa11.59□□□□□ -0.55
SP140-214ENST00000544128 OSBPL3Q9H4L5 887 aa11.59□□□□□ -0.55
SP140-214ENST00000544128 TTC41PQ6P2S7 1318 aa11.59□□□□□ -0.55
SP140-214ENST00000544128 LTBP1Q14766 1721 aa11.58□□□□□ -0.56
SP140-214ENST00000544128 ARAP2Q8WZ64 1704 aa11.58□□□□□ -0.56
SP140-214ENST00000544128 RIMBP2O15034 1052 aa11.58□□□□□ -0.56
SP140-214ENST00000544128 ERC2O15083 957 aa11.58□□□□□ -0.56
SP140-214ENST00000544128 ATP5JP18859 108 aa11.58□□□□□ -0.56
SP140-214ENST00000544128 PHKA1P46020 1223 aa11.58□□□□□ -0.56
SP140-214ENST00000544128 GRIPAP1Q4V328 841 aa11.58□□□□□ -0.56
SP140-214ENST00000544128 CAVIN4Q5BKX8 364 aa11.58□□□□□ -0.56
SP140-214ENST00000544128 SOGA3Q5TF21 947 aa11.58□□□□□ -0.56
SP140-214ENST00000544128 CCDC102BQ68D86 513 aa11.58□□□□□ -0.56
SP140-214ENST00000544128 VPS37DQ86XT2 251 aa11.58□□□□□ -0.56
SP140-214ENST00000544128 REM2Q8IYK8 340 aaPredicted RBP11.58□□□□□ -0.56
SP140-214ENST00000544128 RTKN2Q8IZC4 609 aa11.58□□□□□ -0.56
SP140-214ENST00000544128 PI4K2BQ8TCG2 481 aa11.58□□□□□ -0.56
SP140-214ENST00000544128 FAM84BQ96KN1 310 aaPredicted RBP11.58□□□□□ -0.56
SP140-214ENST00000544128 AOX1Q06278 1338 aa11.58□□□□□ -0.56
SP140-214ENST00000544128 GLRX3O76003 335 aaKnown RBP11.57□□□□□ -0.56
SP140-214ENST00000544128 MAP4K4O95819 1239 aaPredicted RBP11.57□□□□□ -0.56
SP140-214ENST00000544128 HIBADHP31937 336 aaKnown RBP11.57□□□□□ -0.56
SP140-214ENST00000544128 TTC22Q5TAA0 569 aa11.57□□□□□ -0.56
SP140-214ENST00000544128 C15orf52Q6ZUT6 534 aaKnown RBP11.57□□□□□ -0.56
SP140-214ENST00000544128 FBXO33Q7Z6M2 555 aa11.57□□□□□ -0.56
SP140-214ENST00000544128 EYA3Q99504 573 aa11.57□□□□□ -0.56
SP140-214ENST00000544128 BOLA2Q9H3K6 86 aa11.57□□□□□ -0.56
SP140-214ENST00000544128 IRS2Q9Y4H2 1338 aa11.57□□□□□ -0.56
SP140-214ENST00000544128 MED23Q9ULK4 1368 aa11.56□□□□□ -0.56
SP140-214ENST00000544128 UQCRFS1P1P0C7P4 283 aa11.56□□□□□ -0.56
SP140-214ENST00000544128 PDAP1Q13442 181 aaKnown RBP11.56□□□□□ -0.56
SP140-214ENST00000544128 WASHC4Q2M389 1173 aa11.56□□□□□ -0.56
SP140-214ENST00000544128 ZNF804AQ7Z570 1209 aa11.56□□□□□ -0.56
SP140-214ENST00000544128 SUPT20HQ8NEM7 779 aa11.56□□□□□ -0.56
SP140-214ENST00000544128 DNAJC2Q99543 621 aaKnown RBP11.56□□□□□ -0.56
SP140-214ENST00000544128 RTFDC1Q9BY42 306 aaPredicted RBP11.56□□□□□ -0.56
SP140-214ENST00000544128 ZC3H12CQ9C0D7 883 aaKnown RBP11.56□□□□□ -0.56
SP140-214ENST00000544128 DUOX1Q9NRD9 1551 aa11.56□□□□□ -0.56
SP140-214ENST00000544128 SNRKQ9NRH2 765 aa11.56□□□□□ -0.56
SP140-214ENST00000544128 GNL3LQ9NVN8 582 aaKnown RBP11.56□□□□□ -0.56
SP140-214ENST00000544128 IQSEC3Q9UPP2 1182 aaPredicted RBP11.56□□□□□ -0.56
SP140-214ENST00000544128 SNED1Q8TER0 1413 aa11.55□□□□□ -0.56
SP140-214ENST00000544128 GSPT1P15170 499 aaKnown RBP11.55□□□□□ -0.56
SP140-214ENST00000544128 ARID4AP29374 1257 aaPredicted RBP11.55□□□□□ -0.56
SP140-214ENST00000544128 FKBP4Q02790 459 aaKnown RBP eCLIP11.55□□□□□ -0.56
SP140-214ENST00000544128 SCARF1Q14162 830 aa11.55□□□□□ -0.56
SP140-214ENST00000544128 DOK7Q18PE1 504 aa11.55□□□□□ -0.56
SP140-214ENST00000544128 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.55□□□□□ -0.56
SP140-214ENST00000544128 PSMD1Q99460 953 aa11.55□□□□□ -0.56
SP140-214ENST00000544128 SLC24A3Q9HC58 644 aa11.55□□□□□ -0.56
SP140-214ENST00000544128 NDUFB9Q9Y6M9 179 aa11.55□□□□□ -0.56
SP140-214ENST00000544128 ARFGEF1Q9Y6D6 1849 aa11.54□□□□□ -0.56
SP140-214ENST00000544128 TRIM6-TRIM34B2RNG4 842 aa11.54□□□□□ -0.56
SP140-214ENST00000544128 G3V3G9 751 aa11.54□□□□□ -0.56
SP140-214ENST00000544128 FRAT2O75474 233 aaPredicted RBP11.54□□□□□ -0.56
SP140-214ENST00000544128 MCAMP43121 646 aa11.54□□□□□ -0.56
SP140-214ENST00000544128 ZAP70P43403 619 aa11.54□□□□□ -0.56
SP140-214ENST00000544128 AOC3Q16853 763 aa11.54□□□□□ -0.56
SP140-214ENST00000544128 PI16Q6UXB8 463 aa11.54□□□□□ -0.56
SP140-214ENST00000544128 ARHGAP27Q6ZUM4 889 aa11.54□□□□□ -0.56
SP140-214ENST00000544128 RILPL2Q969X0 211 aa11.54□□□□□ -0.56
SP140-214ENST00000544128 EDC3Q96F86 508 aaKnown RBP11.54□□□□□ -0.56
SP140-214ENST00000544128 ZNF512BQ96KM6 892 aaPredicted RBP11.54□□□□□ -0.56
SP140-214ENST00000544128 HAUS7Q99871 368 aa11.54□□□□□ -0.56
SP140-214ENST00000544128 CD209Q9NNX6 404 aa11.54□□□□□ -0.56
SP140-214ENST00000544128 ZNF277Q9NRM2 450 aaPredicted RBP11.54□□□□□ -0.56
SP140-214ENST00000544128 HMG20BQ9P0W2 317 aa11.54□□□□□ -0.56
SP140-214ENST00000544128 NFKBIEO00221 500 aa11.53□□□□□ -0.56
SP140-214ENST00000544128 GOLIM4O00461 696 aa11.53□□□□□ -0.56
SP140-214ENST00000544128 PPIP5K2O43314 1243 aa11.53□□□□□ -0.56
SP140-214ENST00000544128 SDSP20132 328 aa11.53□□□□□ -0.56
SP140-214ENST00000544128 KIAA2012Q0VF49 1180 aa11.53□□□□□ -0.56
SP140-214ENST00000544128 CHAF1AQ13111 956 aaPredicted RBP11.53□□□□□ -0.56
SP140-214ENST00000544128 RASGRF1Q13972 1273 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms