RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 PAXIP1Q6ZW49 1069 aaPredicted RBP23.31■■□□□ 1.32
TMED3-204ENST00000543455 GBA2Q9HCG7 927 aaPredicted RBP23.31■■□□□ 1.32
TMED3-204ENST00000543455 PCDHAC2Q9Y5I4 1007 aa23.31■■□□□ 1.32
TMED3-204ENST00000543455 LRRFIP2Q9Y608 721 aaKnown RBP23.31■■□□□ 1.32
TMED3-204ENST00000543455 ECM29Q5VYK3 1845 aa23.3■■□□□ 1.32
TMED3-204ENST00000543455 PDE8BO95263 885 aa23.3■■□□□ 1.32
TMED3-204ENST00000543455 HIBADHP31937 336 aaKnown RBP23.3■■□□□ 1.32
TMED3-204ENST00000543455 ECE1P42892 770 aa23.3■■□□□ 1.32
TMED3-204ENST00000543455 FKBP1AP62942 108 aaKnown RBP23.3■■□□□ 1.32
TMED3-204ENST00000543455 GRM1Q13255 1194 aa23.3■■□□□ 1.32
TMED3-204ENST00000543455 ATG9AQ7Z3C6 839 aa23.3■■□□□ 1.32
TMED3-204ENST00000543455 FBXO33Q7Z6M2 555 aa23.3■■□□□ 1.32
TMED3-204ENST00000543455 EYA2O00167 538 aa23.3■■□□□ 1.32
TMED3-204ENST00000543455 FGFR2P21802 821 aa23.3■■□□□ 1.32
TMED3-204ENST00000543455 MMP14P50281 582 aa23.3■■□□□ 1.32
TMED3-204ENST00000543455 HUNKP57058 714 aa23.3■■□□□ 1.32
TMED3-204ENST00000543455 AOX1Q06278 1338 aa23.28■■□□□ 1.32
TMED3-204ENST00000543455 ATF7IPQ6VMQ6 1270 aa23.28■■□□□ 1.32
TMED3-204ENST00000543455 HDAC9Q9UKV0 1011 aa23.28■■□□□ 1.32
TMED3-204ENST00000543455 ZBED9Q6R2W3 1325 aa23.27■■□□□ 1.32
TMED3-204ENST00000543455 PAPPA2Q9BXP8 1791 aa23.27■■□□□ 1.32
TMED3-204ENST00000543455 F8W031 263 aaPredicted RBP23.27■■□□□ 1.32
TMED3-204ENST00000543455 PRAMEF18Q5VWM3 479 aa23.27■■□□□ 1.32
TMED3-204ENST00000543455 MTMR14Q8NCE2 650 aa23.27■■□□□ 1.32
TMED3-204ENST00000543455 ZIC5Q96T25 663 aa23.27■■□□□ 1.32
TMED3-204ENST00000543455 IFFO2Q5TF58 517 aa23.26■■□□□ 1.31
TMED3-204ENST00000543455 C2orf69Q8N8R5 385 aa23.26■■□□□ 1.31
TMED3-204ENST00000543455 FRAT1Q92837 279 aaPredicted RBP23.26■■□□□ 1.31
TMED3-204ENST00000543455 IQSEC3Q9UPP2 1182 aaPredicted RBP23.26■■□□□ 1.31
TMED3-204ENST00000543455 PA2G4Q9UQ80 394 aaKnown RBP23.26■■□□□ 1.31
TMED3-204ENST00000543455 FAM155AB1AL88 458 aaPredicted RBP23.25■■□□□ 1.31
TMED3-204ENST00000543455 BCAMP50895 628 aa23.25■■□□□ 1.31
TMED3-204ENST00000543455 GRIK5Q16478 980 aa23.25■■□□□ 1.31
TMED3-204ENST00000543455 CLUAP1Q96AJ1 413 aa23.25■■□□□ 1.31
TMED3-204ENST00000543455 SIL1Q9H173 461 aa23.25■■□□□ 1.31
TMED3-204ENST00000543455 IPO8O15397 1037 aaKnown RBP23.24■■□□□ 1.31
TMED3-204ENST00000543455 MAP2K2P36507 400 aa23.24■■□□□ 1.31
TMED3-204ENST00000543455 MAP2K1Q02750 393 aaPredicted RBP23.24■■□□□ 1.31
TMED3-204ENST00000543455 PUM3Q15397 648 aaKnown RBP23.24■■□□□ 1.31
TMED3-204ENST00000543455 MFSD14BQ5SR56 506 aa23.24■■□□□ 1.31
TMED3-204ENST00000543455 DLGAP5Q15398 846 aa23.24■■□□□ 1.31
TMED3-204ENST00000543455 CFAP100Q494V2 611 aa23.24■■□□□ 1.31
TMED3-204ENST00000543455 RGMBQ6NW40 437 aa23.24■■□□□ 1.31
TMED3-204ENST00000543455 MOB2Q70IA6 237 aa23.24■■□□□ 1.31
TMED3-204ENST00000543455 MYH13Q9UKX3 1938 aa23.23■■□□□ 1.31
TMED3-204ENST00000543455 SPDYE2BA6NHP3 402 aa23.23■■□□□ 1.31
TMED3-204ENST00000543455 CIAO1O76071 339 aa23.23■■□□□ 1.31
TMED3-204ENST00000543455 SPDYE6P0CI01 402 aa23.23■■□□□ 1.31
TMED3-204ENST00000543455 HSPA8P11142 646 aaKnown RBP23.23■■□□□ 1.31
TMED3-204ENST00000543455 AIDAQ96BJ3 306 aa23.23■■□□□ 1.31
TMED3-204ENST00000543455 PRMT6Q96LA8 375 aaPredicted RBP23.23■■□□□ 1.31
TMED3-204ENST00000543455 GNAI3P08754 354 aa23.22■■□□□ 1.31
TMED3-204ENST00000543455 CTCFP49711 727 aaPredicted RBP23.22■■□□□ 1.31
TMED3-204ENST00000543455 TMEM57Q8N5G2 664 aa23.22■■□□□ 1.31
TMED3-204ENST00000543455 COPRSQ9NQ92 184 aa23.22■■□□□ 1.31
TMED3-204ENST00000543455 FBXO3Q9UK99 471 aa23.22■■□□□ 1.31
TMED3-204ENST00000543455 COL1A1P02452 1464 aaPredicted RBP23.22■■□□□ 1.31
TMED3-204ENST00000543455 MTX1Q13505 466 aa23.21■■□□□ 1.31
TMED3-204ENST00000543455 CAVIN4Q5BKX8 364 aa23.21■■□□□ 1.31
TMED3-204ENST00000543455 APOBEC3FQ8IUX4 373 aaKnown RBP23.21■■□□□ 1.31
TMED3-204ENST00000543455 LBX1P52954 281 aa23.2■■□□□ 1.3
TMED3-204ENST00000543455 CHAF1AQ13111 956 aaPredicted RBP23.2■■□□□ 1.3
TMED3-204ENST00000543455 ZKSCAN2Q63HK3 967 aa23.2■■□□□ 1.3
TMED3-204ENST00000543455 VPS37DQ86XT2 251 aa23.2■■□□□ 1.3
TMED3-204ENST00000543455 LPIN2Q92539 896 aa23.2■■□□□ 1.3
TMED3-204ENST00000543455 HDAC5Q9UQL6 1122 aa23.2■■□□□ 1.3
TMED3-204ENST00000543455 CLRN2A0PK11 232 aa23.19■■□□□ 1.3
TMED3-204ENST00000543455 IFIT1P09914 478 aaKnown RBP23.19■■□□□ 1.3
TMED3-204ENST00000543455 FKBP1BP68106 108 aa23.19■■□□□ 1.3
TMED3-204ENST00000543455 NOGQ13253 232 aa23.19■■□□□ 1.3
TMED3-204ENST00000543455 PRDM10Q9NQV6 1147 aa23.19■■□□□ 1.3
TMED3-204ENST00000543455 TTF2Q9UNY4 1162 aaKnown RBP23.19■■□□□ 1.3
TMED3-204ENST00000543455 SSC5DA1L4H1 1573 aa23.19■■□□□ 1.3
TMED3-204ENST00000543455 SLC10A3P09131 477 aa23.18■■□□□ 1.3
TMED3-204ENST00000543455 SLC5A1P13866 664 aa23.18■■□□□ 1.3
TMED3-204ENST00000543455 ZNF157P51786 506 aaPredicted RBP23.18■■□□□ 1.3
TMED3-204ENST00000543455 RLBP1P12271 317 aa23.17■■□□□ 1.3
TMED3-204ENST00000543455 IL15P40933 162 aaPredicted RBP23.17■■□□□ 1.3
TMED3-204ENST00000543455 CEP126Q9P2H0 1117 aa23.17■■□□□ 1.3
TMED3-204ENST00000543455 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.17■■□□□ 1.3
TMED3-204ENST00000543455 UBE2Q2LH0YL09 131 aa23.17■■□□□ 1.3
TMED3-204ENST00000543455 SRGAP3O43295 1099 aa23.17■■□□□ 1.3
TMED3-204ENST00000543455 ATP2B3Q16720 1220 aa23.17■■□□□ 1.3
TMED3-204ENST00000543455 RASAL3Q86YV0 1011 aa23.17■■□□□ 1.3
TMED3-204ENST00000543455 DEFB129Q9H1M3 183 aa23.17■■□□□ 1.3
TMED3-204ENST00000543455 SERPINA10Q9UK55 444 aa23.17■■□□□ 1.3
TMED3-204ENST00000543455 PNMA6EA0A0J9YXQ4 647 aa23.16■■□□□ 1.3
TMED3-204ENST00000543455 TNS4Q8IZW8 715 aa23.16■■□□□ 1.3
TMED3-204ENST00000543455 CCDC102AQ96A19 550 aa23.16■■□□□ 1.3
TMED3-204ENST00000543455 TSKSQ9UJT2 592 aa23.16■■□□□ 1.3
TMED3-204ENST00000543455 GNAI2P04899 355 aa23.15■■□□□ 1.3
TMED3-204ENST00000543455 CRKP46108 304 aa23.15■■□□□ 1.3
TMED3-204ENST00000543455 RBM5P52756 815 aaKnown RBP eCLIP23.15■■□□□ 1.3
TMED3-204ENST00000543455 TBC1D22AQ8WUA7 517 aa23.15■■□□□ 1.3
TMED3-204ENST00000543455 FZD1Q9UP38 647 aa23.15■■□□□ 1.3
TMED3-204ENST00000543455 FRAT2O75474 233 aaPredicted RBP23.14■■□□□ 1.29
TMED3-204ENST00000543455 ADORA1P30542 326 aa23.14■■□□□ 1.29
TMED3-204ENST00000543455 KIF23Q02241 960 aaPredicted RBP23.14■■□□□ 1.29
TMED3-204ENST00000543455 SPDYE2Q495Y8 402 aa23.14■■□□□ 1.29
TMED3-204ENST00000543455 DZIP1LQ8IYY4 767 aaKnown RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 177.1 ms