RNA–Protein interactions for RNA: ENST00000542016.6

RBM23-205, Transcript of RNA binding motif protein 23, human

TSL 2 BASIC

Gene RBM23, Length 1,743 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-205	ENST00000542016	SMARCA5	O60264	1052 aa	Predicted RBP	13.49	□□□□□ -0.25
RBM23-205	ENST00000542016	CLASRP	Q8N2M8	674 aa	Known RBP	13.49	□□□□□ -0.25
RBM23-205	ENST00000542016	CERS5	Q8N5B7	392 aa		13.49	□□□□□ -0.25
RBM23-205	ENST00000542016	GML	Q99445	158 aa		13.49	□□□□□ -0.25
RBM23-205	ENST00000542016	GPRC5D	Q9NZD1	345 aa		13.49	□□□□□ -0.25
RBM23-205	ENST00000542016	SCN4A	P35499	1836 aa		13.48	□□□□□ -0.25
RBM23-205	ENST00000542016	FRAT2	O75474	233 aa	Predicted RBP	13.48	□□□□□ -0.25
RBM23-205	ENST00000542016	VEGFA	P15692	232 aa	Predicted RBP	13.48	□□□□□ -0.25
RBM23-205	ENST00000542016	RPS12	P25398	132 aa	Known RBP	13.48	□□□□□ -0.25
RBM23-205	ENST00000542016	EPS15	P42566	896 aa		13.48	□□□□□ -0.25
RBM23-205	ENST00000542016	GORAB	Q5T7V8	394 aa		13.48	□□□□□ -0.25
RBM23-205	ENST00000542016	AGBL3	Q8NEM8	1001 aa		13.48	□□□□□ -0.25
RBM23-205	ENST00000542016	BCL11A	Q9H165	835 aa		13.48	□□□□□ -0.25
RBM23-205	ENST00000542016	RWDD1	Q9H446	243 aa	Predicted RBP	13.48	□□□□□ -0.25
RBM23-205	ENST00000542016	GNL3L	Q9NVN8	582 aa	Known RBP	13.48	□□□□□ -0.25
RBM23-205	ENST00000542016	IQCA1L	A6NCM1	817 aa		13.47	□□□□□ -0.25
RBM23-205	ENST00000542016	KIF3C	O14782	793 aa		13.47	□□□□□ -0.25
RBM23-205	ENST00000542016	ZBTB22	O15209	634 aa		13.47	□□□□□ -0.25
RBM23-205	ENST00000542016	CHAF1A	Q13111	956 aa	Predicted RBP	13.47	□□□□□ -0.25
RBM23-205	ENST00000542016	RASGRF1	Q13972	1273 aa		13.47	□□□□□ -0.25
RBM23-205	ENST00000542016	DPF2	Q92785	391 aa		13.47	□□□□□ -0.25
RBM23-205	ENST00000542016	GCC1	Q96CN9	775 aa		13.47	□□□□□ -0.25
RBM23-205	ENST00000542016	HACL1	Q9UJ83	578 aa		13.47	□□□□□ -0.25
RBM23-205	ENST00000542016	MYO3B	Q8WXR4	1341 aa		13.47	□□□□□ -0.25
RBM23-205	ENST00000542016	MYH13	Q9UKX3	1938 aa		13.47	□□□□□ -0.25
RBM23-205	ENST00000542016	SEMA3E	O15041	775 aa		13.47	□□□□□ -0.25
RBM23-205	ENST00000542016	ARID4A	P29374	1257 aa	Predicted RBP	13.47	□□□□□ -0.25
RBM23-205	ENST00000542016	LMOD1	P29536	600 aa	Predicted RBP	13.47	□□□□□ -0.25
RBM23-205	ENST00000542016	SCARF1	Q14162	830 aa		13.47	□□□□□ -0.25
RBM23-205	ENST00000542016	MFSD14B	Q5SR56	506 aa		13.47	□□□□□ -0.25
RBM23-205	ENST00000542016	SMC5	Q8IY18	1101 aa		13.47	□□□□□ -0.25
RBM23-205	ENST00000542016	MICALL2	Q8IY33	904 aa		13.47	□□□□□ -0.25
RBM23-205	ENST00000542016	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.47	□□□□□ -0.25
RBM23-205	ENST00000542016	CNOT7	Q9UIV1	285 aa	Known RBP	13.47	□□□□□ -0.25
RBM23-205	ENST00000542016	IFIT2	P09913	472 aa	Known RBP	13.46	□□□□□ -0.25
RBM23-205	ENST00000542016	EPHX2	P34913	555 aa		13.46	□□□□□ -0.25
RBM23-205	ENST00000542016	MCAM	P43121	646 aa		13.46	□□□□□ -0.25
RBM23-205	ENST00000542016	FKBP1A	P62942	108 aa	Known RBP	13.46	□□□□□ -0.25
RBM23-205	ENST00000542016	GRIK5	Q16478	980 aa		13.46	□□□□□ -0.25
RBM23-205	ENST00000542016	CCDC158	Q5M9N0	1113 aa		13.46	□□□□□ -0.25
RBM23-205	ENST00000542016	ERICH6B	Q5W0A0	696 aa		13.46	□□□□□ -0.25
RBM23-205	ENST00000542016	PI16	Q6UXB8	463 aa		13.46	□□□□□ -0.25
RBM23-205	ENST00000542016	KIAA0825	Q8IV33	1275 aa		13.46	□□□□□ -0.25
RBM23-205	ENST00000542016	DENND2A	Q9ULE3	1009 aa		13.46	□□□□□ -0.25
RBM23-205	ENST00000542016	EGFR	P00533	1210 aa		13.45	□□□□□ -0.26
RBM23-205	ENST00000542016	USP17L8	P0C7I0	530 aa		13.45	□□□□□ -0.26
RBM23-205	ENST00000542016	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.45	□□□□□ -0.26
RBM23-205	ENST00000542016	HMG20B	Q9P0W2	317 aa		13.45	□□□□□ -0.26
RBM23-205	ENST00000542016	UQCRFS1P1	P0C7P4	283 aa		13.44	□□□□□ -0.26
RBM23-205	ENST00000542016	ZNF280A	P59817	542 aa	Predicted RBP	13.44	□□□□□ -0.26
RBM23-205	ENST00000542016	TTC39A	Q5SRH9	613 aa		13.44	□□□□□ -0.26
RBM23-205	ENST00000542016	SPATA5	Q8NB90	893 aa		13.44	□□□□□ -0.26
RBM23-205	ENST00000542016	WDR66	Q8TBY9	1149 aa		13.44	□□□□□ -0.26
RBM23-205	ENST00000542016	TBC1D22A	Q8WUA7	517 aa		13.44	□□□□□ -0.26
RBM23-205	ENST00000542016	ADARB2	Q9NS39	739 aa	Known RBP	13.44	□□□□□ -0.26
RBM23-205	ENST00000542016	PDS5A	Q29RF7	1337 aa	Known RBP	13.44	□□□□□ -0.26
RBM23-205	ENST00000542016	AKAP11	Q9UKA4	1901 aa		13.44	□□□□□ -0.26
RBM23-205	ENST00000542016		F8W031	263 aa	Predicted RBP	13.44	□□□□□ -0.26
RBM23-205	ENST00000542016		H7C1D1	291 aa		13.44	□□□□□ -0.26
RBM23-205	ENST00000542016	POTEI	P0CG38	1075 aa		13.44	□□□□□ -0.26
RBM23-205	ENST00000542016	POTEJ	P0CG39	1038 aa		13.44	□□□□□ -0.26
RBM23-205	ENST00000542016	ANKRD45	Q5TZF3	282 aa		13.44	□□□□□ -0.26
RBM23-205	ENST00000542016	SAMD7	Q7Z3H4	446 aa		13.44	□□□□□ -0.26
RBM23-205	ENST00000542016	TRPM4	Q8TD43	1214 aa		13.44	□□□□□ -0.26
RBM23-205	ENST00000542016	B4GALNT3	Q6L9W6	998 aa		13.43	□□□□□ -0.26
RBM23-205	ENST00000542016	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.43	□□□□□ -0.26
RBM23-205	ENST00000542016	OGFOD1	Q8N543	542 aa		13.43	□□□□□ -0.26
RBM23-205	ENST00000542016	SALL1	Q9NSC2	1324 aa		13.43	□□□□□ -0.26
RBM23-205	ENST00000542016	HIRA	P54198	1017 aa	Predicted RBP	13.42	□□□□□ -0.26
RBM23-205	ENST00000542016	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.42	□□□□□ -0.26
RBM23-205	ENST00000542016	PNMA8A	Q86V59	439 aa	Predicted RBP	13.42	□□□□□ -0.26
RBM23-205	ENST00000542016	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.42	□□□□□ -0.26
RBM23-205	ENST00000542016	MYOZ2	Q9NPC6	264 aa		13.42	□□□□□ -0.26
RBM23-205	ENST00000542016	SNRK	Q9NRH2	765 aa		13.42	□□□□□ -0.26
RBM23-205	ENST00000542016	TTF2	Q9UNY4	1162 aa	Known RBP	13.42	□□□□□ -0.26
RBM23-205	ENST00000542016	ADAMTSL1	Q8N6G6	1762 aa		13.42	□□□□□ -0.26
RBM23-205	ENST00000542016	PRDX5	P30044	214 aa		13.42	□□□□□ -0.26
RBM23-205	ENST00000542016	EAPP	Q56P03	285 aa	Predicted RBP	13.42	□□□□□ -0.26
RBM23-205	ENST00000542016	RBM26	Q5T8P6	1007 aa	Known RBP	13.42	□□□□□ -0.26
RBM23-205	ENST00000542016	USP50	Q70EL3	339 aa	Predicted RBP	13.42	□□□□□ -0.26
RBM23-205	ENST00000542016	PPP4R2	Q9NY27	417 aa		13.42	□□□□□ -0.26
RBM23-205	ENST00000542016	SUGT1	Q9Y2Z0	365 aa		13.42	□□□□□ -0.26
RBM23-205	ENST00000542016	NDUFB9	Q9Y6M9	179 aa		13.42	□□□□□ -0.26
RBM23-205	ENST00000542016	CYP2E1	P05181	493 aa	Predicted RBP	13.41	□□□□□ -0.26
RBM23-205	ENST00000542016	ZAP70	P43403	619 aa		13.41	□□□□□ -0.26
RBM23-205	ENST00000542016	NUCB1	Q02818	461 aa		13.41	□□□□□ -0.26
RBM23-205	ENST00000542016	KIF4B	Q2VIQ3	1234 aa		13.41	□□□□□ -0.26
RBM23-205	ENST00000542016	TSHZ3	Q63HK5	1081 aa		13.41	□□□□□ -0.26
RBM23-205	ENST00000542016	TBC1D9	Q6ZT07	1266 aa		13.41	□□□□□ -0.26
RBM23-205	ENST00000542016	LNPK	Q9C0E8	428 aa		13.41	□□□□□ -0.26
RBM23-205	ENST00000542016	ABCF2	Q9UG63	623 aa		13.41	□□□□□ -0.26
RBM23-205	ENST00000542016	CEP350	Q5VT06	3117 aa		13.4	□□□□□ -0.26
RBM23-205	ENST00000542016	TOMM70	O94826	608 aa		13.4	□□□□□ -0.26
RBM23-205	ENST00000542016	MMP14	P50281	582 aa		13.4	□□□□□ -0.26
RBM23-205	ENST00000542016	CHD1L	Q86WJ1	897 aa		13.4	□□□□□ -0.26
RBM23-205	ENST00000542016	ZGPAT	Q8N5A5	531 aa	Known RBP	13.4	□□□□□ -0.26
RBM23-205	ENST00000542016	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
RBM23-205	ENST00000542016	ECHDC1	Q9NTX5	307 aa		13.4	□□□□□ -0.26
RBM23-205	ENST00000542016	HDAC9	Q9UKV0	1011 aa		13.4	□□□□□ -0.26
RBM23-205	ENST00000542016	PCDHAC2	Q9Y5I4	1007 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms