RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 JAG2Q9Y219 1238 aa30.43■■■□□ 2.46
LEMD3-203ENST00000541171 TBC1D8O95759 1140 aa30.42■■■□□ 2.46
LEMD3-203ENST00000541171 PTPN12Q05209 780 aaKnown RBP30.42■■■□□ 2.46
LEMD3-203ENST00000541171 LDHAL6AQ6ZMR3 332 aa30.42■■■□□ 2.46
LEMD3-203ENST00000541171 CNNM1Q9NRU3 951 aa30.42■■■□□ 2.46
LEMD3-203ENST00000541171 CTU1Q7Z7A3 348 aaKnown RBP30.41■■■□□ 2.46
LEMD3-203ENST00000541171 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.41■■■□□ 2.46
LEMD3-203ENST00000541171 PCDHAC2Q9Y5I4 1007 aa30.41■■■□□ 2.46
LEMD3-203ENST00000541171 ANGEL1Q9UNK9 670 aaKnown RBP30.4■■■□□ 2.46
LEMD3-203ENST00000541171 FZD1Q9UP38 647 aa30.4■■■□□ 2.46
LEMD3-203ENST00000541171 IL1R1P14778 569 aa30.39■■■□□ 2.46
LEMD3-203ENST00000541171 DEFB129Q9H1M3 183 aa30.39■■■□□ 2.46
LEMD3-203ENST00000541171 SRCIN1Q9C0H9 1055 aa30.38■■■□□ 2.45
LEMD3-203ENST00000541171 ALDH1L1O75891 902 aa30.37■■■□□ 2.45
LEMD3-203ENST00000541171 TM4SF4P48230 202 aa30.37■■■□□ 2.45
LEMD3-203ENST00000541171 CFAP100Q494V2 611 aa30.37■■■□□ 2.45
LEMD3-203ENST00000541171 CLRN2A0PK11 232 aa30.36■■■□□ 2.45
LEMD3-203ENST00000541171 RBM5P52756 815 aaKnown RBP eCLIP30.35■■■□□ 2.45
LEMD3-203ENST00000541171 SOX10P56693 466 aa30.35■■■□□ 2.45
LEMD3-203ENST00000541171 MTMR14Q8NCE2 650 aa30.35■■■□□ 2.45
LEMD3-203ENST00000541171 ZNF296Q8WUU4 475 aaPredicted RBP30.35■■■□□ 2.45
LEMD3-203ENST00000541171 MYO1BO43795 1136 aa30.34■■■□□ 2.45
LEMD3-203ENST00000541171 SREBF2Q12772 1141 aa30.34■■■□□ 2.45
LEMD3-203ENST00000541171 LDLRAD1Q5T700 205 aa30.34■■■□□ 2.45
LEMD3-203ENST00000541171 SUCLG2Q96I99 432 aa30.34■■■□□ 2.45
LEMD3-203ENST00000541171 PRMT6Q96LA8 375 aaPredicted RBP30.34■■■□□ 2.45
LEMD3-203ENST00000541171 VEZTQ9HBM0 779 aa30.34■■■□□ 2.45
LEMD3-203ENST00000541171 FKBP1AP62942 108 aaKnown RBP30.33■■■□□ 2.45
LEMD3-203ENST00000541171 PUS3Q9BZE2 481 aaKnown RBP30.33■■■□□ 2.45
LEMD3-203ENST00000541171 A0A1B0GUL6 1792 aa30.33■■■□□ 2.45
LEMD3-203ENST00000541171 SPDYE2BA6NHP3 402 aa30.32■■■□□ 2.44
LEMD3-203ENST00000541171 SPDYE6P0CI01 402 aa30.32■■■□□ 2.44
LEMD3-203ENST00000541171 SPRYD7Q5W111 196 aa30.32■■■□□ 2.44
LEMD3-203ENST00000541171 AOX1Q06278 1338 aa30.31■■■□□ 2.44
LEMD3-203ENST00000541171 SLC10A4Q96EP9 437 aa30.31■■■□□ 2.44
LEMD3-203ENST00000541171 COL1A1P02452 1464 aaPredicted RBP30.31■■■□□ 2.44
LEMD3-203ENST00000541171 GPR25O00155 361 aa30.3■■■□□ 2.44
LEMD3-203ENST00000541171 NBPF7P0C2Y1 421 aaPredicted RBP30.3■■■□□ 2.44
LEMD3-203ENST00000541171 GYG1P46976 350 aa30.3■■■□□ 2.44
LEMD3-203ENST00000541171 KAZALD1Q96I82 304 aa30.3■■■□□ 2.44
LEMD3-203ENST00000541171 PPP2R3BQ9Y5P8 575 aa30.3■■■□□ 2.44
LEMD3-203ENST00000541171 PPP1R12BO60237 982 aaPredicted RBP30.29■■■□□ 2.44
LEMD3-203ENST00000541171 UBE4AQ14139 1066 aa30.29■■■□□ 2.44
LEMD3-203ENST00000541171 HIBADHP31937 336 aaKnown RBP30.28■■■□□ 2.44
LEMD3-203ENST00000541171 SUPT20HL1Q3ZLR7 823 aa30.28■■■□□ 2.44
LEMD3-203ENST00000541171 TDRD7Q8NHU6 1098 aaKnown RBP30.28■■■□□ 2.44
LEMD3-203ENST00000541171 CLMNQ96JQ2 1002 aa30.28■■■□□ 2.44
LEMD3-203ENST00000541171 HPS5Q9UPZ3 1129 aa30.28■■■□□ 2.44
LEMD3-203ENST00000541171 FAM205AQ6ZU69 1335 aa30.27■■■□□ 2.44
LEMD3-203ENST00000541171 MFSD14BQ5SR56 506 aa30.27■■■□□ 2.44
LEMD3-203ENST00000541171 NBPF12Q5TAG4 269 aaPredicted RBP30.27■■■□□ 2.44
LEMD3-203ENST00000541171 R3HDMLQ9H3Y0 253 aa30.27■■■□□ 2.44
LEMD3-203ENST00000541171 SSC5DA1L4H1 1573 aa30.26■■■□□ 2.43
LEMD3-203ENST00000541171 PKN2Q16513 984 aaKnown RBP30.26■■■□□ 2.43
LEMD3-203ENST00000541171 MAP3K11Q16584 847 aa30.26■■■□□ 2.43
LEMD3-203ENST00000541171 FAM84BQ96KN1 310 aaPredicted RBP30.26■■■□□ 2.43
LEMD3-203ENST00000541171 TTF2Q9UNY4 1162 aaKnown RBP30.26■■■□□ 2.43
LEMD3-203ENST00000541171 RASA3Q14644 834 aa30.25■■■□□ 2.43
LEMD3-203ENST00000541171 BICC1Q9H694 974 aaKnown RBP30.25■■■□□ 2.43
LEMD3-203ENST00000541171 MRPL50Q8N5N7 158 aaKnown RBP30.24■■■□□ 2.43
LEMD3-203ENST00000541171 WNK4Q96J92 1243 aa30.24■■■□□ 2.43
LEMD3-203ENST00000541171 RIPOR2Q9Y4F9 1068 aa30.24■■■□□ 2.43
LEMD3-203ENST00000541171 MANSC4A6NHS7 340 aaPredicted RBP30.23■■■□□ 2.43
LEMD3-203ENST00000541171 FKTNO75072 461 aa30.23■■■□□ 2.43
LEMD3-203ENST00000541171 TDRD3Q9H7E2 651 aaKnown RBP30.23■■■□□ 2.43
LEMD3-203ENST00000541171 IQSEC3Q9UPP2 1182 aaPredicted RBP30.23■■■□□ 2.43
LEMD3-203ENST00000541171 MROH5Q6ZUA9 1318 aa30.22■■■□□ 2.43
LEMD3-203ENST00000541171 ZNF521Q96K83 1311 aa30.22■■■□□ 2.43
LEMD3-203ENST00000541171 IREB2P48200 963 aaKnown RBP30.22■■■□□ 2.43
LEMD3-203ENST00000541171 NOM1Q5C9Z4 860 aaKnown RBP30.22■■■□□ 2.43
LEMD3-203ENST00000541171 VPS37DQ86XT2 251 aa30.22■■■□□ 2.43
LEMD3-203ENST00000541171 ZNF70Q9UC06 446 aaPredicted RBP30.22■■■□□ 2.43
LEMD3-203ENST00000541171 ECM29Q5VYK3 1845 aa30.22■■■□□ 2.43
LEMD3-203ENST00000541171 UTYO14607 1347 aa30.22■■■□□ 2.43
LEMD3-203ENST00000541171 USP2O75604 605 aaPredicted RBP30.21■■■□□ 2.43
LEMD3-203ENST00000541171 ALDH1A1P00352 501 aa30.21■■■□□ 2.43
LEMD3-203ENST00000541171 LRRC24Q50LG9 513 aa30.21■■■□□ 2.43
LEMD3-203ENST00000541171 IFNL1Q8IU54 200 aa30.21■■■□□ 2.43
LEMD3-203ENST00000541171 CFHR5Q9BXR6 569 aa30.21■■■□□ 2.43
LEMD3-203ENST00000541171 SERPINA10Q9UK55 444 aa30.21■■■□□ 2.43
LEMD3-203ENST00000541171 ZBTB48P10074 688 aaPredicted RBP30.2■■■□□ 2.43
LEMD3-203ENST00000541171 INHBEP58166 350 aa30.2■■■□□ 2.43
LEMD3-203ENST00000541171 CHAF1AQ13111 956 aaPredicted RBP30.2■■■□□ 2.43
LEMD3-203ENST00000541171 METTL24Q5JXM2 366 aa30.2■■■□□ 2.43
LEMD3-203ENST00000541171 ANKRD44Q8N8A2 993 aa30.2■■■□□ 2.43
LEMD3-203ENST00000541171 TNFAIP1Q13829 316 aa30.19■■■□□ 2.42
LEMD3-203ENST00000541171 RABL6Q3YEC7 729 aaPredicted RBP30.19■■■□□ 2.42
LEMD3-203ENST00000541171 SPDYE2Q495Y8 402 aa30.19■■■□□ 2.42
LEMD3-203ENST00000541171 FRAT2O75474 233 aaPredicted RBP30.18■■■□□ 2.42
LEMD3-203ENST00000541171 CRKP46108 304 aa30.18■■■□□ 2.42
LEMD3-203ENST00000541171 DZIP1LQ8IYY4 767 aaKnown RBP30.18■■■□□ 2.42
LEMD3-203ENST00000541171 UNCXA6NJT0 531 aa30.17■■■□□ 2.42
LEMD3-203ENST00000541171 TCP10L2B9ZVM9 353 aa30.17■■■□□ 2.42
LEMD3-203ENST00000541171 IGF2BP3O00425 579 aaKnown RBP eCLIP30.17■■■□□ 2.42
LEMD3-203ENST00000541171 GRIK5Q16478 980 aa30.17■■■□□ 2.42
LEMD3-203ENST00000541171 FBXO46Q6PJ61 603 aaPredicted RBP30.17■■■□□ 2.42
LEMD3-203ENST00000541171 FBXO33Q7Z6M2 555 aa30.17■■■□□ 2.42
LEMD3-203ENST00000541171 ANKRD13AQ8IZ07 590 aa30.17■■■□□ 2.42
LEMD3-203ENST00000541171 KLHDC4Q8TBB5 520 aa30.17■■■□□ 2.42
LEMD3-203ENST00000541171 GJA5P36382 358 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms