RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 NCAPGQ9BPX3 1015 aa11.28□□□□□ -0.6
TRERF1-205ENST00000541110 AMOTL2Q9Y2J4 779 aa11.28□□□□□ -0.6
TRERF1-205ENST00000541110 SMTNP53814 917 aa11.28□□□□□ -0.6
TRERF1-205ENST00000541110 CAPZA3Q96KX2 299 aa11.28□□□□□ -0.6
TRERF1-205ENST00000541110 SBNO2Q9Y2G9 1366 aa11.28□□□□□ -0.6
TRERF1-205ENST00000541110 PRG4Q92954 1404 aaPredicted RBP11.28□□□□□ -0.6
TRERF1-205ENST00000541110 GNG11P61952 73 aa11.28□□□□□ -0.6
TRERF1-205ENST00000541110 PPFIA1Q13136 1202 aa11.28□□□□□ -0.6
TRERF1-205ENST00000541110 ANKRD24Q8TF21 1146 aa11.28□□□□□ -0.6
TRERF1-205ENST00000541110 SKA2Q8WVK7 121 aaPredicted RBP11.28□□□□□ -0.6
TRERF1-205ENST00000541110 CNNM2Q9H8M5 875 aa11.28□□□□□ -0.6
TRERF1-205ENST00000541110 TSTA3Q13630 321 aaPredicted RBP11.28□□□□□ -0.6
TRERF1-205ENST00000541110 CCDC110Q8TBZ0 833 aa11.28□□□□□ -0.6
TRERF1-205ENST00000541110 STK32BQ9NY57 414 aa11.28□□□□□ -0.6
TRERF1-205ENST00000541110 AQRO60306 1485 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRERF1-205ENST00000541110 NR1I2O75469 434 aa11.28□□□□□ -0.6
TRERF1-205ENST00000541110 LDHBP07195 334 aaKnown RBP11.28□□□□□ -0.6
TRERF1-205ENST00000541110 ZCRB1Q8TBF4 217 aaKnown RBP11.28□□□□□ -0.6
TRERF1-205ENST00000541110 DACT3Q96B18 629 aaPredicted RBP11.28□□□□□ -0.6
TRERF1-205ENST00000541110 PRKAG2Q9UGJ0 569 aa11.28□□□□□ -0.6
TRERF1-205ENST00000541110 KLF18A0A0U1RQI7 1052 aa11.28□□□□□ -0.6
TRERF1-205ENST00000541110 KRT19P08727 400 aa11.28□□□□□ -0.6
TRERF1-205ENST00000541110 KRT2P35908 639 aa11.28□□□□□ -0.6
TRERF1-205ENST00000541110 TTC14Q96N46 770 aa11.28□□□□□ -0.6
TRERF1-205ENST00000541110 ARHGEF10LQ9HCE6 1279 aa11.28□□□□□ -0.6
TRERF1-205ENST00000541110 GPCPD1Q9NPB8 672 aa11.28□□□□□ -0.6
TRERF1-205ENST00000541110 SEPT10Q9P0V9 454 aa11.28□□□□□ -0.6
TRERF1-205ENST00000541110 IFRD2Q12894 506 aaPredicted RBP11.27□□□□□ -0.6
TRERF1-205ENST00000541110 FNBP4Q8N3X1 1017 aaPredicted RBP11.27□□□□□ -0.6
TRERF1-205ENST00000541110 CARD10Q9BWT7 1032 aa11.27□□□□□ -0.6
TRERF1-205ENST00000541110 FAM184BQ9ULE4 1060 aa11.27□□□□□ -0.6
TRERF1-205ENST00000541110 PLEKHH1Q9ULM0 1364 aa11.27□□□□□ -0.6
TRERF1-205ENST00000541110 CCDC170Q8IYT3 715 aa11.27□□□□□ -0.61
TRERF1-205ENST00000541110 NBPF3Q9H094 633 aa11.27□□□□□ -0.61
TRERF1-205ENST00000541110 PSMA7O14818 248 aa11.27□□□□□ -0.61
TRERF1-205ENST00000541110 CEP120Q8N960 986 aa11.27□□□□□ -0.61
TRERF1-205ENST00000541110 ATRIPQ8WXE1 791 aa11.27□□□□□ -0.61
TRERF1-205ENST00000541110 PSPC1Q8WXF1 523 aaKnown RBP11.27□□□□□ -0.61
TRERF1-205ENST00000541110 CHMP6Q96FZ7 201 aa11.27□□□□□ -0.61
TRERF1-205ENST00000541110 LRRC2Q9BYS8 371 aa11.27□□□□□ -0.61
TRERF1-205ENST00000541110 KIF3CO14782 793 aa11.27□□□□□ -0.61
TRERF1-205ENST00000541110 SNRPA1P09661 255 aaKnown RBP11.27□□□□□ -0.61
TRERF1-205ENST00000541110 PLCG2P16885 1265 aa11.27□□□□□ -0.61
TRERF1-205ENST00000541110 TPTE2Q6XPS3 522 aa11.27□□□□□ -0.61
TRERF1-205ENST00000541110 KRT79Q5XKE5 535 aa11.27□□□□□ -0.61
TRERF1-205ENST00000541110 HACE1Q8IYU2 909 aa11.27□□□□□ -0.61
TRERF1-205ENST00000541110 TMTC2Q8N394 836 aa11.27□□□□□ -0.61
TRERF1-205ENST00000541110 PARD3BQ8TEW8 1205 aa11.27□□□□□ -0.61
TRERF1-205ENST00000541110 IFT81Q8WYA0 676 aa11.27□□□□□ -0.61
TRERF1-205ENST00000541110 FAM193BQ96PV7 902 aaPredicted RBP11.27□□□□□ -0.61
TRERF1-205ENST00000541110 ESYT2A0FGR8 921 aa11.27□□□□□ -0.61
TRERF1-205ENST00000541110 OPA1O60313 960 aa11.27□□□□□ -0.61
TRERF1-205ENST00000541110 TTC30BQ8N4P2 665 aa11.27□□□□□ -0.61
TRERF1-205ENST00000541110 METTL13Q8N6R0 699 aa11.27□□□□□ -0.61
TRERF1-205ENST00000541110 GDPD2Q9HCC8 539 aa11.27□□□□□ -0.61
TRERF1-205ENST00000541110 MUM1L1Q5H9M0 696 aa11.26□□□□□ -0.61
TRERF1-205ENST00000541110 SEL1L2Q5TEA6 688 aa11.26□□□□□ -0.61
TRERF1-205ENST00000541110 MIGA1Q8NAN2 632 aa11.26□□□□□ -0.61
TRERF1-205ENST00000541110 CHST3Q7LGC8 479 aa11.26□□□□□ -0.61
TRERF1-205ENST00000541110 UBLCP1Q8WVY7 318 aaPredicted RBP11.26□□□□□ -0.61
TRERF1-205ENST00000541110 DHX58Q96C10 678 aa11.26□□□□□ -0.61
TRERF1-205ENST00000541110 SH2D4AQ9H788 454 aa11.26□□□□□ -0.61
TRERF1-205ENST00000541110 KIF9Q9HAQ2 790 aa11.26□□□□□ -0.61
TRERF1-205ENST00000541110 CIB2O75838 187 aa11.26□□□□□ -0.61
TRERF1-205ENST00000541110 EPB41P11171 864 aaKnown RBP11.26□□□□□ -0.61
TRERF1-205ENST00000541110 MARCKSP29966 332 aaPredicted RBP11.26□□□□□ -0.61
TRERF1-205ENST00000541110 UBXN1Q04323 297 aa11.26□□□□□ -0.61
TRERF1-205ENST00000541110 ZNF569Q5MCW4 686 aa11.26□□□□□ -0.61
TRERF1-205ENST00000541110 SRGAP1Q7Z6B7 1085 aa11.26□□□□□ -0.61
TRERF1-205ENST00000541110 LEO1Q8WVC0 666 aaPredicted RBP11.26□□□□□ -0.61
TRERF1-205ENST00000541110 FAM135AQ9P2D6 1515 aa11.26□□□□□ -0.61
TRERF1-205ENST00000541110 PRPF6O94906 941 aaKnown RBP11.26□□□□□ -0.61
TRERF1-205ENST00000541110 FCHSD1Q86WN1 690 aa11.26□□□□□ -0.61
TRERF1-205ENST00000541110 TNPO1Q92973 898 aaKnown RBP11.26□□□□□ -0.61
TRERF1-205ENST00000541110 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.26□□□□□ -0.61
TRERF1-205ENST00000541110 CTAGE9A4FU28 777 aa11.26□□□□□ -0.61
TRERF1-205ENST00000541110 CLUL1Q15846 466 aa11.26□□□□□ -0.61
TRERF1-205ENST00000541110 NUF2Q9BZD4 464 aa11.26□□□□□ -0.61
TRERF1-205ENST00000541110 GOLGA6CA6NDK9 693 aa11.25□□□□□ -0.61
TRERF1-205ENST00000541110 GOLGA6BA6NDN3 693 aa11.25□□□□□ -0.61
TRERF1-205ENST00000541110 GOLGA6DP0CG33 693 aa11.25□□□□□ -0.61
TRERF1-205ENST00000541110 ITKQ08881 620 aa11.25□□□□□ -0.61
TRERF1-205ENST00000541110 DZIP3Q86Y13 1208 aaKnown RBP11.25□□□□□ -0.61
TRERF1-205ENST00000541110 GOLGA6AQ9NYA3 693 aa11.25□□□□□ -0.61
TRERF1-205ENST00000541110 TACC1O75410 805 aa11.25□□□□□ -0.61
TRERF1-205ENST00000541110 CALML3P27482 149 aa11.25□□□□□ -0.61
TRERF1-205ENST00000541110 MNAT1P51948 309 aa11.25□□□□□ -0.61
TRERF1-205ENST00000541110 TRAPPC3LQ5T215 181 aa11.25□□□□□ -0.61
TRERF1-205ENST00000541110 TMTC4Q5T4D3 741 aa11.25□□□□□ -0.61
TRERF1-205ENST00000541110 ZNF526Q8TF50 670 aaPredicted RBP11.25□□□□□ -0.61
TRERF1-205ENST00000541110 CEBPAP49715 358 aaPredicted RBP11.25□□□□□ -0.61
TRERF1-205ENST00000541110 TSHZ3Q63HK5 1081 aa11.25□□□□□ -0.61
TRERF1-205ENST00000541110 AZI2Q9H6S1 392 aa11.25□□□□□ -0.61
TRERF1-205ENST00000541110 C9orf84Q5VXU9 1444 aa11.25□□□□□ -0.61
TRERF1-205ENST00000541110 MYCP01106 439 aaPredicted RBP11.25□□□□□ -0.61
TRERF1-205ENST00000541110 CEP85LQ5SZL2 805 aa11.25□□□□□ -0.61
TRERF1-205ENST00000541110 SDCCAG8Q86SQ7 713 aaPredicted RBP11.25□□□□□ -0.61
TRERF1-205ENST00000541110 BANK1Q8NDB2 785 aa11.25□□□□□ -0.61
TRERF1-205ENST00000541110 CAMSAP2Q08AD1 1489 aa11.25□□□□□ -0.61
TRERF1-205ENST00000541110 TLDC2A0PJX2 215 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms