RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 PPP1R13BQ96KQ4 1090 aa12.08□□□□□ -0.48
CDC42SE1-207ENST00000540998 INCENPQ9NQS7 918 aa12.08□□□□□ -0.48
CDC42SE1-207ENST00000540998 RGPD5Q99666 1765 aa12.07□□□□□ -0.48
CDC42SE1-207ENST00000540998 NAA16Q6N069 864 aaPredicted RBP12.07□□□□□ -0.48
CDC42SE1-207ENST00000540998 FEZ1Q99689 392 aa12.07□□□□□ -0.48
CDC42SE1-207ENST00000540998 SENP2Q9HC62 589 aa12.07□□□□□ -0.48
CDC42SE1-207ENST00000540998 SALL1Q9NSC2 1324 aa12.07□□□□□ -0.48
CDC42SE1-207ENST00000540998 KLF18A0A0U1RQI7 1052 aa12.07□□□□□ -0.48
CDC42SE1-207ENST00000540998 GOLGA8BA8MQT2 603 aa12.07□□□□□ -0.48
CDC42SE1-207ENST00000540998 TMEM232C9JQI7 657 aa12.07□□□□□ -0.48
CDC42SE1-207ENST00000540998 CSB-PGBD3P0DP91 1061 aa12.07□□□□□ -0.48
CDC42SE1-207ENST00000540998 SLIT1O75093 1534 aa12.07□□□□□ -0.48
CDC42SE1-207ENST00000540998 WDHD1O75717 1129 aaPredicted RBP12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 A1BGP04217 495 aa12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 IFIT1P09914 478 aaKnown RBP12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 FOXO4P98177 505 aa12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 TTC5Q8N0Z6 440 aa12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 LINC00301Q8NCQ3 95 aa12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 CLIC6Q96NY7 704 aa12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 HDAC5Q9UQL6 1122 aa12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 ARHGAP23Q9P227 1491 aa12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 A0A1B0GUL7 405 aa12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 NBPF26B4DH59 902 aa12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 CYP27B1O15528 508 aa12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 NBPF14Q5TI25 921 aa12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 NBPF10Q6P3W6 841 aaKnown RBP12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 NBPF15Q8N660 670 aa12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 MYL10Q9BUA6 226 aa12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 KIAA1468Q9P260 1216 aa12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 ORC3Q9UBD5 711 aaPredicted RBP12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 PHKG2P15735 406 aa12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 CASP7P55210 303 aa12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 SYNE4Q8N205 404 aa12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 ZNF397Q8NF99 534 aaPredicted RBP12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 C8orf76Q96K31 380 aa12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 ZNF396Q96N95 335 aaPredicted RBP12.06□□□□□ -0.48
CDC42SE1-207ENST00000540998 KIF13AQ9H1H9 1805 aa12.05□□□□□ -0.48
CDC42SE1-207ENST00000540998 FOXN1O15353 648 aa12.05□□□□□ -0.48
CDC42SE1-207ENST00000540998 PNOCQ13519 176 aa12.05□□□□□ -0.48
CDC42SE1-207ENST00000540998 ZMYM1Q5SVZ6 1142 aa12.05□□□□□ -0.48
CDC42SE1-207ENST00000540998 HOMER1Q86YM7 354 aa12.05□□□□□ -0.48
CDC42SE1-207ENST00000540998 PHKBQ93100 1093 aa12.05□□□□□ -0.48
CDC42SE1-207ENST00000540998 DNAI1Q9UI46 699 aa12.05□□□□□ -0.48
CDC42SE1-207ENST00000540998 NCAPD2Q15021 1401 aa12.05□□□□□ -0.48
CDC42SE1-207ENST00000540998 SEC31AO94979 1220 aaKnown RBP12.05□□□□□ -0.48
CDC42SE1-207ENST00000540998 ZNF202O95125 648 aa12.05□□□□□ -0.48
CDC42SE1-207ENST00000540998 SLU7O95391 586 aaKnown RBP12.05□□□□□ -0.48
CDC42SE1-207ENST00000540998 PFKFB1P16118 471 aa12.05□□□□□ -0.48
CDC42SE1-207ENST00000540998 NCAPHQ15003 741 aa12.05□□□□□ -0.48
CDC42SE1-207ENST00000540998 ZRSR1Q15695 479 aaKnown RBP12.05□□□□□ -0.48
CDC42SE1-207ENST00000540998 RABL6Q3YEC7 729 aaPredicted RBP12.05□□□□□ -0.48
CDC42SE1-207ENST00000540998 CHMP4AQ9BY43 222 aa12.05□□□□□ -0.48
CDC42SE1-207ENST00000540998 PUS7LQ9H0K6 701 aaKnown RBP12.05□□□□□ -0.48
CDC42SE1-207ENST00000540998 HPS5Q9UPZ3 1129 aa12.05□□□□□ -0.48
CDC42SE1-207ENST00000540998 MORC2Q9Y6X9 1032 aaPredicted RBP12.05□□□□□ -0.48
CDC42SE1-207ENST00000540998 SPTLC2O15270 562 aa12.04□□□□□ -0.48
CDC42SE1-207ENST00000540998 PRC1O43663 620 aa12.04□□□□□ -0.48
CDC42SE1-207ENST00000540998 SLC3A2P08195 630 aaKnown RBP12.04□□□□□ -0.48
CDC42SE1-207ENST00000540998 ANTXR2P58335 489 aa12.04□□□□□ -0.48
CDC42SE1-207ENST00000540998 LLPHQ9BRT6 129 aaKnown RBP12.04□□□□□ -0.48
CDC42SE1-207ENST00000540998 SH3TC1Q8TE82 1336 aa12.04□□□□□ -0.48
CDC42SE1-207ENST00000540998 CTAGE5O15320 804 aa12.04□□□□□ -0.48
CDC42SE1-207ENST00000540998 KIF20AO95235 890 aa12.04□□□□□ -0.48
CDC42SE1-207ENST00000540998 SFPQP23246 707 aaKnown RBP eCLIP12.04□□□□□ -0.48
CDC42SE1-207ENST00000540998 HSD3B7Q9H2F3 369 aa12.04□□□□□ -0.48
CDC42SE1-207ENST00000540998 MYH15Q9Y2K3 1946 aa12.04□□□□□ -0.48
CDC42SE1-207ENST00000540998 MEGF6O75095 1541 aa12.04□□□□□ -0.48
CDC42SE1-207ENST00000540998 AFDNP55196 1824 aaKnown RBP12.04□□□□□ -0.48
CDC42SE1-207ENST00000540998 FGAP02671 866 aa12.04□□□□□ -0.48
CDC42SE1-207ENST00000540998 SNRPA1P09661 255 aaKnown RBP12.04□□□□□ -0.48
CDC42SE1-207ENST00000540998 TERF2Q15554 542 aa12.04□□□□□ -0.48
CDC42SE1-207ENST00000540998 MYSM1Q5VVJ2 828 aa12.04□□□□□ -0.48
CDC42SE1-207ENST00000540998 KRT222Q8N1A0 295 aa12.04□□□□□ -0.48
CDC42SE1-207ENST00000540998 MRC1P22897 1456 aa12.03□□□□□ -0.48
CDC42SE1-207ENST00000540998 ARHGAP29Q52LW3 1261 aa12.03□□□□□ -0.48
CDC42SE1-207ENST00000540998 ADALQ6DHV7 355 aa12.03□□□□□ -0.48
CDC42SE1-207ENST00000540998 KRT28Q7Z3Y7 464 aa12.03□□□□□ -0.48
CDC42SE1-207ENST00000540998 RNF113AO15541 343 aaKnown RBP12.03□□□□□ -0.48
CDC42SE1-207ENST00000540998 CLCN6P51797 869 aa12.03□□□□□ -0.48
CDC42SE1-207ENST00000540998 FANCCQ00597 558 aa12.03□□□□□ -0.48
CDC42SE1-207ENST00000540998 ZNF827Q17R98 1081 aa12.03□□□□□ -0.48
CDC42SE1-207ENST00000540998 ERO1AQ96HE7 468 aa12.03□□□□□ -0.48
CDC42SE1-207ENST00000540998 RTEL1Q9NZ71 1219 aa12.03□□□□□ -0.48
CDC42SE1-207ENST00000540998 CPLX1O14810 134 aa12.02□□□□□ -0.48
CDC42SE1-207ENST00000540998 POLR3GO15318 223 aaPredicted RBP12.02□□□□□ -0.48
CDC42SE1-207ENST00000540998 CDC27P30260 824 aa12.02□□□□□ -0.48
CDC42SE1-207ENST00000540998 ZAP70P43403 619 aa12.02□□□□□ -0.48
CDC42SE1-207ENST00000540998 CCDC82Q8N4S0 544 aa12.02□□□□□ -0.48
CDC42SE1-207ENST00000540998 DSCC1Q9BVC3 393 aa12.02□□□□□ -0.48
CDC42SE1-207ENST00000540998 UTP14AQ9BVJ6 771 aaKnown RBP12.02□□□□□ -0.48
CDC42SE1-207ENST00000540998 AXDND1Q5T1B0 1012 aaPredicted RBP12.02□□□□□ -0.49
CDC42SE1-207ENST00000540998 AGXT2Q9BYV1 514 aa12.02□□□□□ -0.49
CDC42SE1-207ENST00000540998 PDIA4P13667 645 aaKnown RBP12.02□□□□□ -0.49
CDC42SE1-207ENST00000540998 MICU3Q86XE3 530 aa12.02□□□□□ -0.49
CDC42SE1-207ENST00000540998 FBXO18Q8NFZ0 1043 aa12.02□□□□□ -0.49
CDC42SE1-207ENST00000540998 NAT10Q9H0A0 1025 aaKnown RBP12.02□□□□□ -0.49
CDC42SE1-207ENST00000540998 URI1O94763 535 aaPredicted RBP12.01□□□□□ -0.49
CDC42SE1-207ENST00000540998 HMGB1P09429 215 aaKnown RBP12.01□□□□□ -0.49
CDC42SE1-207ENST00000540998 TATP17735 454 aaPredicted RBP12.01□□□□□ -0.49
CDC42SE1-207ENST00000540998 GRIN1Q05586 938 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms