RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 AEBP1Q8IUX7 1158 aa6.29□□□□□ -1.4
SNHG1-214ENST00000540865 HHIPL1Q96JK4 782 aa6.29□□□□□ -1.4
SNHG1-214ENST00000540865 SETDB2Q96T68 719 aa6.29□□□□□ -1.4
SNHG1-214ENST00000540865 ZNF277Q9NRM2 450 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-214ENST00000540865 VIRMAQ69YN4 1812 aaKnown RBP6.29□□□□□ -1.4
SNHG1-214ENST00000540865 DLEC1Q9Y238 1755 aa6.29□□□□□ -1.4
SNHG1-214ENST00000540865 KLRG2A4D1S0 409 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-214ENST00000540865 AXIN1O15169 862 aa6.28□□□□□ -1.4
SNHG1-214ENST00000540865 RNMTO43148 476 aaKnown RBP6.28□□□□□ -1.4
SNHG1-214ENST00000540865 WIPF1O43516 503 aa6.28□□□□□ -1.4
SNHG1-214ENST00000540865 AOC2O75106 756 aa6.28□□□□□ -1.4
SNHG1-214ENST00000540865 F12P00748 615 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-214ENST00000540865 LMOD1P29536 600 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-214ENST00000540865 IL6STP40189 918 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-214ENST00000540865 IARSP41252 1262 aaKnown RBP6.28□□□□□ -1.4
SNHG1-214ENST00000540865 TNNT2P45379 298 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-214ENST00000540865 SULT6B1Q6IMI4 303 aa6.28□□□□□ -1.4
SNHG1-214ENST00000540865 USP50Q70EL3 339 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-214ENST00000540865 BANK1Q8NDB2 785 aa6.28□□□□□ -1.4
SNHG1-214ENST00000540865 TEX13AQ9BXU3 409 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-214ENST00000540865 LGR6Q9HBX8 967 aa6.28□□□□□ -1.4
SNHG1-214ENST00000540865 TJP1Q07157 1748 aa6.28□□□□□ -1.4
SNHG1-214ENST00000540865 ANKRD26Q9UPS8 1709 aa6.28□□□□□ -1.4
SNHG1-214ENST00000540865 SCN4AP35499 1836 aa6.27□□□□□ -1.41
SNHG1-214ENST00000540865 ADAMTSL1Q8N6G6 1762 aa6.27□□□□□ -1.41
SNHG1-214ENST00000540865 TRAF5O00463 557 aa6.27□□□□□ -1.41
SNHG1-214ENST00000540865 CAMTA2O94983 1202 aa6.27□□□□□ -1.41
SNHG1-214ENST00000540865 AVPP01185 164 aa6.27□□□□□ -1.41
SNHG1-214ENST00000540865 EIF6P56537 245 aaKnown RBP6.27□□□□□ -1.41
SNHG1-214ENST00000540865 INSM1Q01101 510 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-214ENST00000540865 FMR1Q06787 632 aaKnown RBP eCLIP6.27□□□□□ -1.41
SNHG1-214ENST00000540865 NPM2Q86SE8 214 aaKnown RBP6.27□□□□□ -1.41
SNHG1-214ENST00000540865 SAPCD2Q86UD0 394 aa6.27□□□□□ -1.41
SNHG1-214ENST00000540865 SYNE4Q8N205 404 aa6.27□□□□□ -1.41
SNHG1-214ENST00000540865 JDP2Q8WYK2 163 aa6.27□□□□□ -1.41
SNHG1-214ENST00000540865 PSMD1Q99460 953 aa6.27□□□□□ -1.41
SNHG1-214ENST00000540865 TRIM34Q9BYJ4 488 aa6.27□□□□□ -1.41
SNHG1-214ENST00000540865 EVA1BQ9NVM1 165 aa6.27□□□□□ -1.41
SNHG1-214ENST00000540865 TOR4AQ9NXH8 423 aa6.27□□□□□ -1.41
SNHG1-214ENST00000540865 TBC1D2BQ9UPU7 963 aa6.27□□□□□ -1.41
SNHG1-214ENST00000540865 THSD7BQ9C0I4 1608 aa6.27□□□□□ -1.41
SNHG1-214ENST00000540865 AFDNP55196 1824 aaKnown RBP6.27□□□□□ -1.41
SNHG1-214ENST00000540865 FER1L6Q2WGJ9 1857 aa6.26□□□□□ -1.41
SNHG1-214ENST00000540865 ALDH1B1P30837 517 aa6.26□□□□□ -1.41
SNHG1-214ENST00000540865 IL13P35225 146 aa6.26□□□□□ -1.41
SNHG1-214ENST00000540865 SCNN1DP51172 638 aa6.26□□□□□ -1.41
SNHG1-214ENST00000540865 KCNH2Q12809 1159 aa6.26□□□□□ -1.41
SNHG1-214ENST00000540865 NOGQ13253 232 aa6.26□□□□□ -1.41
SNHG1-214ENST00000540865 CC2D2BQ6DHV5 1058 aa6.26□□□□□ -1.41
SNHG1-214ENST00000540865 CLEC4GQ6UXB4 293 aa6.26□□□□□ -1.41
SNHG1-214ENST00000540865 NBPF5PQ86XG9 351 aaPredicted RBP6.26□□□□□ -1.41
SNHG1-214ENST00000540865 TTC5Q8N0Z6 440 aa6.26□□□□□ -1.41
SNHG1-214ENST00000540865 GJA3Q9Y6H8 435 aa6.26□□□□□ -1.41
SNHG1-214ENST00000540865 KIF20BQ96Q89 1820 aa6.26□□□□□ -1.41
SNHG1-214ENST00000540865 MRC1P22897 1456 aa6.26□□□□□ -1.41
SNHG1-214ENST00000540865 DICER1Q9UPY3 1922 aaKnown RBP6.25□□□□□ -1.41
SNHG1-214ENST00000540865 CELF2O95319 508 aaKnown RBP6.25□□□□□ -1.41
SNHG1-214ENST00000540865 EPS15P42566 896 aa6.25□□□□□ -1.41
SNHG1-214ENST00000540865 SOX10P56693 466 aa6.25□□□□□ -1.41
SNHG1-214ENST00000540865 CIAPIN1Q6FI81 312 aa6.25□□□□□ -1.41
SNHG1-214ENST00000540865 OLFM4Q6UX06 510 aa6.25□□□□□ -1.41
SNHG1-214ENST00000540865 TPTE2Q6XPS3 522 aa6.25□□□□□ -1.41
SNHG1-214ENST00000540865 CYP4X1Q8N118 509 aa6.25□□□□□ -1.41
SNHG1-214ENST00000540865 GCC1Q96CN9 775 aa6.25□□□□□ -1.41
SNHG1-214ENST00000540865 POM121Q96HA1 1249 aa6.25□□□□□ -1.41
SNHG1-214ENST00000540865 UNC93B1Q9H1C4 597 aa6.25□□□□□ -1.41
SNHG1-214ENST00000540865 ADARB2Q9NS39 739 aaKnown RBP6.25□□□□□ -1.41
SNHG1-214ENST00000540865 SAGE1Q9NXZ1 904 aa6.25□□□□□ -1.41
SNHG1-214ENST00000540865 ZNF330Q9Y3S2 320 aaPredicted RBP6.25□□□□□ -1.41
SNHG1-214ENST00000540865 HEG1Q9ULI3 1381 aa6.24□□□□□ -1.41
SNHG1-214ENST00000540865 CTC1Q2NKJ3 1217 aa6.24□□□□□ -1.41
SNHG1-214ENST00000540865 LINC01559Q495D7 138 aa6.24□□□□□ -1.41
SNHG1-214ENST00000540865 DZIP3Q86Y13 1208 aaKnown RBP6.24□□□□□ -1.41
SNHG1-214ENST00000540865 CLUAP1Q96AJ1 413 aa6.24□□□□□ -1.41
SNHG1-214ENST00000540865 ZNF496Q96IT1 587 aaPredicted RBP6.24□□□□□ -1.41
SNHG1-214ENST00000540865 PGAP2Q9UHJ9 254 aa6.24□□□□□ -1.41
SNHG1-214ENST00000540865 ZNF652Q9Y2D9 606 aa6.24□□□□□ -1.41
SNHG1-214ENST00000540865 LTBP1Q14766 1721 aa6.24□□□□□ -1.41
SNHG1-214ENST00000540865 CCDC88AQ3V6T2 1871 aa6.24□□□□□ -1.41
SNHG1-214ENST00000540865 SLX4Q8IY92 1834 aa6.23□□□□□ -1.41
SNHG1-214ENST00000540865 COL11A2P13942 1736 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-214ENST00000540865 A1BGP04217 495 aa6.23□□□□□ -1.41
SNHG1-214ENST00000540865 SNRPBP14678 240 aaKnown RBP6.23□□□□□ -1.41
SNHG1-214ENST00000540865 FLIIQ13045 1269 aa6.23□□□□□ -1.41
SNHG1-214ENST00000540865 MTHFSDQ2M296 383 aaKnown RBP6.23□□□□□ -1.41
SNHG1-214ENST00000540865 ZNF790Q6PG37 636 aa6.23□□□□□ -1.41
SNHG1-214ENST00000540865 MORC1Q86VD1 984 aa6.23□□□□□ -1.41
SNHG1-214ENST00000540865 LARGE2Q8N3Y3 721 aa6.23□□□□□ -1.41
SNHG1-214ENST00000540865 NBPF15Q8N660 670 aa6.23□□□□□ -1.41
SNHG1-214ENST00000540865 FMNL2Q96PY5 1086 aa6.23□□□□□ -1.41
SNHG1-214ENST00000540865 GLIS2Q9BZE0 524 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-214ENST00000540865 GDPD2Q9HCC8 539 aa6.23□□□□□ -1.41
SNHG1-214ENST00000540865 GPRC5DQ9NZD1 345 aa6.23□□□□□ -1.41
SNHG1-214ENST00000540865 SNED1Q8TER0 1413 aa6.23□□□□□ -1.41
SNHG1-214ENST00000540865 ANKRD31Q8N7Z5 1873 aa6.22□□□□□ -1.41
SNHG1-214ENST00000540865 ZBTB24O43167 697 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-214ENST00000540865 GPR37L1O60883 481 aa6.22□□□□□ -1.41
SNHG1-214ENST00000540865 RPIAP49247 311 aa6.22□□□□□ -1.41
SNHG1-214ENST00000540865 SMCPP49901 116 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-214ENST00000540865 HUNKP57058 714 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms