RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 OSGEPQ9NPF4 335 aa6.98□□□□□ -1.29
MDM2-227ENST00000540709 A0A1W2PP55 124 aa6.97□□□□□ -1.29
MDM2-227ENST00000540709 GSTM4Q03013 218 aa6.97□□□□□ -1.29
MDM2-227ENST00000540709 SPRED3Q2MJR0 410 aa6.97□□□□□ -1.29
MDM2-227ENST00000540709 KIAA1211Q6ZU35 1233 aa6.97□□□□□ -1.29
MDM2-227ENST00000540709 VN1R5Q7Z5H4 357 aa6.97□□□□□ -1.29
MDM2-227ENST00000540709 DZIP1LQ8IYY4 767 aaKnown RBP6.97□□□□□ -1.29
MDM2-227ENST00000540709 WNT8BQ93098 351 aa6.97□□□□□ -1.29
MDM2-227ENST00000540709 UBL7Q96S82 380 aaPredicted RBP6.97□□□□□ -1.29
MDM2-227ENST00000540709 CEP41Q9BYV8 373 aa6.97□□□□□ -1.29
MDM2-227ENST00000540709 LIN7BQ9HAP6 207 aa6.97□□□□□ -1.29
MDM2-227ENST00000540709 SOWAHDA6NJG2 315 aa6.96□□□□□ -1.3
MDM2-227ENST00000540709 CPNE3O75131 537 aaKnown RBP6.96□□□□□ -1.3
MDM2-227ENST00000540709 GADD45BO75293 160 aaPredicted RBP6.96□□□□□ -1.3
MDM2-227ENST00000540709 BRD1O95696 1058 aa6.96□□□□□ -1.3
MDM2-227ENST00000540709 PRR23CQ6ZRP0 262 aa6.96□□□□□ -1.3
MDM2-227ENST00000540709 GALNT12Q8IXK2 581 aa6.96□□□□□ -1.3
MDM2-227ENST00000540709 UTP4Q969X6 686 aaKnown RBP6.96□□□□□ -1.3
MDM2-227ENST00000540709 RUSC1Q9BVN2 902 aa6.96□□□□□ -1.3
MDM2-227ENST00000540709 KRTAP4-8Q9BYQ9 185 aa6.96□□□□□ -1.3
MDM2-227ENST00000540709 EHD4Q9H223 541 aa6.96□□□□□ -1.3
MDM2-227ENST00000540709 A0A096LPE4 126 aa6.95□□□□□ -1.3
MDM2-227ENST00000540709 A0A1W2PPZ6 126 aa6.95□□□□□ -1.3
MDM2-227ENST00000540709 Q8N3U1 123 aa6.95□□□□□ -1.3
MDM2-227ENST00000540709 CITED4Q96RK1 184 aa6.95□□□□□ -1.3
MDM2-227ENST00000540709 BHLHE41Q9C0J9 482 aaPredicted RBP6.95□□□□□ -1.3
MDM2-227ENST00000540709 NPHS2Q9NP85 383 aa6.95□□□□□ -1.3
MDM2-227ENST00000540709 STOML1Q9UBI4 398 aa6.95□□□□□ -1.3
MDM2-227ENST00000540709 EIF1AYO14602 144 aaKnown RBP6.94□□□□□ -1.3
MDM2-227ENST00000540709 TM4SF5O14894 197 aa6.94□□□□□ -1.3
MDM2-227ENST00000540709 GPR182O15218 404 aa6.94□□□□□ -1.3
MDM2-227ENST00000540709 ESRRAP11474 423 aaPredicted RBP6.94□□□□□ -1.3
MDM2-227ENST00000540709 FDX2Q6P4F2 183 aa6.94□□□□□ -1.3
MDM2-227ENST00000540709 FAM129BQ96TA1 746 aa6.94□□□□□ -1.3
MDM2-227ENST00000540709 RNF208Q9H0X6 261 aa6.94□□□□□ -1.3
MDM2-227ENST00000540709 KCNF1Q9H3M0 494 aa6.94□□□□□ -1.3
MDM2-227ENST00000540709 DHX15O43143 795 aaKnown RBP6.93□□□□□ -1.3
MDM2-227ENST00000540709 MAPK1P28482 360 aa6.93□□□□□ -1.3
MDM2-227ENST00000540709 GRIA4P48058 902 aa6.93□□□□□ -1.3
MDM2-227ENST00000540709 PCDH1Q08174 1060 aa6.93□□□□□ -1.3
MDM2-227ENST00000540709 NUTM2GQ5VZR2 741 aa6.93□□□□□ -1.3
MDM2-227ENST00000540709 CCNJLQ8IV13 435 aa6.93□□□□□ -1.3
MDM2-227ENST00000540709 C12orf50Q8NA57 414 aaPredicted RBP6.93□□□□□ -1.3
MDM2-227ENST00000540709 CCDC74AQ96AQ1 378 aa6.93□□□□□ -1.3
MDM2-227ENST00000540709 RAXQ9Y2V3 346 aa6.93□□□□□ -1.3
MDM2-227ENST00000540709 GAS2O43903 313 aaKnown RBP6.92□□□□□ -1.3
MDM2-227ENST00000540709 FSTP19883 344 aa6.92□□□□□ -1.3
MDM2-227ENST00000540709 Q6ZS46 218 aa6.92□□□□□ -1.3
MDM2-227ENST00000540709 DMRTB1Q96MA1 342 aa6.92□□□□□ -1.3
MDM2-227ENST00000540709 TCF12Q99081 682 aa6.92□□□□□ -1.3
MDM2-227ENST00000540709 CLEC4MQ9H2X3 399 aaPredicted RBP6.92□□□□□ -1.3
MDM2-227ENST00000540709 IVNS1ABPQ9Y6Y0 642 aa6.92□□□□□ -1.3
MDM2-227ENST00000540709 BMP3P12645 472 aa6.91□□□□□ -1.3
MDM2-227ENST00000540709 RXRBP28702 533 aa6.91□□□□□ -1.3
MDM2-227ENST00000540709 PREPP48147 710 aa6.91□□□□□ -1.3
MDM2-227ENST00000540709 ARMC10Q8N2F6 343 aa6.91□□□□□ -1.3
MDM2-227ENST00000540709 DCTN4Q9UJW0 460 aa6.91□□□□□ -1.3
MDM2-227ENST00000540709 GNEQ9Y223 722 aaKnown RBP6.91□□□□□ -1.3
MDM2-227ENST00000540709 LOC100289279A0A1B0GTE1 492 aa6.9□□□□□ -1.3
MDM2-227ENST00000540709 ZNF157P51786 506 aaPredicted RBP6.9□□□□□ -1.3
MDM2-227ENST00000540709 ZNF423Q2M1K9 1284 aa6.9□□□□□ -1.3
MDM2-227ENST00000540709 KIAA0319Q5VV43 1072 aa6.9□□□□□ -1.3
MDM2-227ENST00000540709 ANKRD34AQ69YU3 496 aa6.9□□□□□ -1.3
MDM2-227ENST00000540709 TMC7Q7Z402 723 aa6.9□□□□□ -1.3
MDM2-227ENST00000540709 EPS8L3Q8TE67 593 aaKnown RBP6.9□□□□□ -1.3
MDM2-227ENST00000540709 CSRNP1Q96S65 589 aa6.9□□□□□ -1.3
MDM2-227ENST00000540709 RBCK1Q9BYM8 510 aa6.9□□□□□ -1.3
MDM2-227ENST00000540709 HMX2A2RU54 273 aa6.89□□□□□ -1.31
MDM2-227ENST00000540709 DRD2P14416 443 aa6.89□□□□□ -1.31
MDM2-227ENST00000540709 PLCB3Q01970 1234 aa6.89□□□□□ -1.31
MDM2-227ENST00000540709 TRIM42Q8IWZ5 723 aa6.89□□□□□ -1.31
MDM2-227ENST00000540709 FAM46AQ96IP4 442 aaKnown RBP6.89□□□□□ -1.31
MDM2-227ENST00000540709 DNAJC25Q9H1X3 360 aa6.89□□□□□ -1.31
MDM2-227ENST00000540709 CYP4F12Q9HCS2 524 aa6.89□□□□□ -1.31
MDM2-227ENST00000540709 NLRP2Q9NX02 1062 aa6.89□□□□□ -1.31
MDM2-227ENST00000540709 DLGAP3O95886 979 aa6.88□□□□□ -1.31
MDM2-227ENST00000540709 MAOBP27338 520 aa6.88□□□□□ -1.31
MDM2-227ENST00000540709 USP11P51784 963 aa6.88□□□□□ -1.31
MDM2-227ENST00000540709 POU4F3Q15319 338 aa6.88□□□□□ -1.31
MDM2-227ENST00000540709 UVSSAQ2YD98 709 aa6.88□□□□□ -1.31
MDM2-227ENST00000540709 EXOSC6Q5RKV6 272 aaKnown RBP6.88□□□□□ -1.31
MDM2-227ENST00000540709 PI16Q6UXB8 463 aa6.88□□□□□ -1.31
MDM2-227ENST00000540709 BEND4Q6ZU67 534 aa6.88□□□□□ -1.31
MDM2-227ENST00000540709 DDX54Q8TDD1 881 aaKnown RBP6.88□□□□□ -1.31
MDM2-227ENST00000540709 MYRFLQ96LU7 910 aa6.88□□□□□ -1.31
MDM2-227ENST00000540709 SOX17Q9H6I2 414 aaPredicted RBP6.88□□□□□ -1.31
MDM2-227ENST00000540709 C7orf69Q9H7B7 122 aa6.88□□□□□ -1.31
MDM2-227ENST00000540709 ZFP64Q9NPA5 681 aa6.88□□□□□ -1.31
MDM2-227ENST00000540709 RAD18Q9NS91 495 aa6.88□□□□□ -1.31
MDM2-227ENST00000540709 PPP4R2Q9NY27 417 aa6.88□□□□□ -1.31
MDM2-227ENST00000540709 IGLV1-40P01703 118 aa6.87□□□□□ -1.31
MDM2-227ENST00000540709 IGHA2P01877 340 aa6.87□□□□□ -1.31
MDM2-227ENST00000540709 CYP11A1P05108 521 aa6.87□□□□□ -1.31
MDM2-227ENST00000540709 SSTR4P31391 388 aa6.87□□□□□ -1.31
MDM2-227ENST00000540709 MAPK8P45983 427 aa6.87□□□□□ -1.31
MDM2-227ENST00000540709 NBPF11Q86T75 865 aa6.87□□□□□ -1.31
MDM2-227ENST00000540709 FAM20CQ8IXL6 584 aa6.87□□□□□ -1.31
MDM2-227ENST00000540709 CORO1BQ9BR76 489 aa6.87□□□□□ -1.31
MDM2-227ENST00000540709 PNMA6FA0A0J9YX94 578 aa6.86□□□□□ -1.31
MDM2-227ENST00000540709 TMEM238LA0A1B0GVL6 79 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms