RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 KIAA0825Q8IV33 1275 aa16.52■□□□□ 0.24
SEMA4D-223ENST00000540475 TDRD7Q8NHU6 1098 aaKnown RBP16.52■□□□□ 0.24
SEMA4D-223ENST00000540475 PUS3Q9BZE2 481 aaKnown RBP16.52■□□□□ 0.24
SEMA4D-223ENST00000540475 CASP8AP2Q9UKL3 1982 aa16.51■□□□□ 0.23
SEMA4D-223ENST00000540475 SLC10A3P09131 477 aa16.51■□□□□ 0.23
SEMA4D-223ENST00000540475 VGLL2Q8N8G2 317 aa16.51■□□□□ 0.23
SEMA4D-223ENST00000540475 FBXW7Q969H0 707 aa16.51■□□□□ 0.23
SEMA4D-223ENST00000540475 FAM84BQ96KN1 310 aaPredicted RBP16.51■□□□□ 0.23
SEMA4D-223ENST00000540475 COL1A1P02452 1464 aaPredicted RBP16.5■□□□□ 0.23
SEMA4D-223ENST00000540475 ZNF157P51786 506 aaPredicted RBP16.5■□□□□ 0.23
SEMA4D-223ENST00000540475 APOBEC3FQ8IUX4 373 aaKnown RBP16.5■□□□□ 0.23
SEMA4D-223ENST00000540475 REM2Q8IYK8 340 aaPredicted RBP16.5■□□□□ 0.23
SEMA4D-223ENST00000540475 LAMB1P07942 1786 aa16.49■□□□□ 0.23
SEMA4D-223ENST00000540475 PLIN1O60240 522 aa16.49■□□□□ 0.23
SEMA4D-223ENST00000540475 HIBADHP31937 336 aaKnown RBP16.49■□□□□ 0.23
SEMA4D-223ENST00000540475 KIF23Q02241 960 aaPredicted RBP16.49■□□□□ 0.23
SEMA4D-223ENST00000540475 FBXO33Q7Z6M2 555 aa16.49■□□□□ 0.23
SEMA4D-223ENST00000540475 SAGE1Q9NXZ1 904 aa16.49■□□□□ 0.23
SEMA4D-223ENST00000540475 PDE8BO95263 885 aa16.48■□□□□ 0.23
SEMA4D-223ENST00000540475 RFX5P48382 616 aaPredicted RBP16.48■□□□□ 0.23
SEMA4D-223ENST00000540475 LRRC24Q50LG9 513 aa16.48■□□□□ 0.23
SEMA4D-223ENST00000540475 RASAL3Q86YV0 1011 aa16.48■□□□□ 0.23
SEMA4D-223ENST00000540475 SMC4Q9NTJ3 1288 aa16.48■□□□□ 0.23
SEMA4D-223ENST00000540475 SCAF8Q9UPN6 1271 aaKnown RBP16.48■□□□□ 0.23
SEMA4D-223ENST00000540475 KIF16BQ96L93 1317 aa16.47■□□□□ 0.23
SEMA4D-223ENST00000540475 SPDYE2BA6NHP3 402 aa16.47■□□□□ 0.23
SEMA4D-223ENST00000540475 SPDYE6P0CI01 402 aa16.47■□□□□ 0.23
SEMA4D-223ENST00000540475 GYG1P46976 350 aa16.47■□□□□ 0.23
SEMA4D-223ENST00000540475 DLGAP5Q15398 846 aa16.47■□□□□ 0.23
SEMA4D-223ENST00000540475 CSRNP1Q96S65 589 aa16.47■□□□□ 0.23
SEMA4D-223ENST00000540475 FGFR2P21802 821 aa16.46■□□□□ 0.23
SEMA4D-223ENST00000540475 PRAMEF18Q5VWM3 479 aa16.46■□□□□ 0.23
SEMA4D-223ENST00000540475 ARHGAP45Q92619 1136 aa16.46■□□□□ 0.23
SEMA4D-223ENST00000540475 PRMT6Q96LA8 375 aaPredicted RBP16.46■□□□□ 0.23
SEMA4D-223ENST00000540475 NOB1Q9ULX3 412 aaKnown RBP16.46■□□□□ 0.23
SEMA4D-223ENST00000540475 PPP2R3BQ9Y5P8 575 aa16.46■□□□□ 0.23
SEMA4D-223ENST00000540475 UBE2Q2LH0YL09 131 aa16.45■□□□□ 0.22
SEMA4D-223ENST00000540475 RARSP54136 660 aaKnown RBP16.45■□□□□ 0.22
SEMA4D-223ENST00000540475 PTPN12Q05209 780 aaKnown RBP16.45■□□□□ 0.22
SEMA4D-223ENST00000540475 MAP3K11Q16584 847 aa16.45■□□□□ 0.22
SEMA4D-223ENST00000540475 CFAP100Q494V2 611 aa16.45■□□□□ 0.22
SEMA4D-223ENST00000540475 LDLRAD1Q5T700 205 aa16.45■□□□□ 0.22
SEMA4D-223ENST00000540475 MOB2Q70IA6 237 aa16.45■□□□□ 0.22
SEMA4D-223ENST00000540475 API5Q9BZZ5 524 aaKnown RBP16.45■□□□□ 0.22
SEMA4D-223ENST00000540475 DEFB129Q9H1M3 183 aa16.45■□□□□ 0.22
SEMA4D-223ENST00000540475 TSKSQ9UJT2 592 aa16.45■□□□□ 0.22
SEMA4D-223ENST00000540475 SERPINA10Q9UK55 444 aa16.45■□□□□ 0.22
SEMA4D-223ENST00000540475 FBXO3Q9UK99 471 aa16.45■□□□□ 0.22
SEMA4D-223ENST00000540475 PCDHAC2Q9Y5I4 1007 aa16.45■□□□□ 0.22
SEMA4D-223ENST00000540475 MYH13Q9UKX3 1938 aa16.45■□□□□ 0.22
SEMA4D-223ENST00000540475 UNCXA6NJT0 531 aa16.44■□□□□ 0.22
SEMA4D-223ENST00000540475 NF2P35240 595 aa16.44■□□□□ 0.22
SEMA4D-223ENST00000540475 METTL24Q5JXM2 366 aa16.44■□□□□ 0.22
SEMA4D-223ENST00000540475 MFSD14BQ5SR56 506 aa16.44■□□□□ 0.22
SEMA4D-223ENST00000540475 KLHDC4Q8TBB5 520 aa16.44■□□□□ 0.22
SEMA4D-223ENST00000540475 RNF186Q9NXI6 227 aa16.44■□□□□ 0.22
SEMA4D-223ENST00000540475 EYA2O00167 538 aa16.43■□□□□ 0.22
SEMA4D-223ENST00000540475 ZBTB22O15209 634 aa16.43■□□□□ 0.22
SEMA4D-223ENST00000540475 CAPN15O75808 1086 aa16.43■□□□□ 0.22
SEMA4D-223ENST00000540475 ATG9AQ7Z3C6 839 aa16.43■□□□□ 0.22
SEMA4D-223ENST00000540475 MRIQ9BWK5 157 aa16.43■□□□□ 0.22
SEMA4D-223ENST00000540475 AOX1Q06278 1338 aa16.43■□□□□ 0.22
SEMA4D-223ENST00000540475 SSC5DA1L4H1 1573 aa16.43■□□□□ 0.22
SEMA4D-223ENST00000540475 F8W031 263 aaPredicted RBP16.42■□□□□ 0.22
SEMA4D-223ENST00000540475 MYO1BO43795 1136 aa16.42■□□□□ 0.22
SEMA4D-223ENST00000540475 TM4SF4P48230 202 aa16.42■□□□□ 0.22
SEMA4D-223ENST00000540475 HDLBPQ00341 1268 aaKnown RBP16.42■□□□□ 0.22
SEMA4D-223ENST00000540475 CAVIN4Q5BKX8 364 aa16.42■□□□□ 0.22
SEMA4D-223ENST00000540475 INTS3Q68E01 1043 aaKnown RBP16.42■□□□□ 0.22
SEMA4D-223ENST00000540475 ARMC9Q7Z3E5 817 aa16.42■□□□□ 0.22
SEMA4D-223ENST00000540475 ABHD8Q96I13 439 aa16.42■□□□□ 0.22
SEMA4D-223ENST00000540475 JAG2Q9Y219 1238 aa16.42■□□□□ 0.22
SEMA4D-223ENST00000540475 CIAO1O76071 339 aa16.41■□□□□ 0.22
SEMA4D-223ENST00000540475 UBTFL1P0CB47 393 aaPredicted RBP16.41■□□□□ 0.22
SEMA4D-223ENST00000540475 PUM3Q15397 648 aaKnown RBP16.41■□□□□ 0.22
SEMA4D-223ENST00000540475 SPDYE2Q495Y8 402 aa16.41■□□□□ 0.22
SEMA4D-223ENST00000540475 TBC1D22AQ8WUA7 517 aa16.41■□□□□ 0.22
SEMA4D-223ENST00000540475 TTF2Q9UNY4 1162 aaKnown RBP16.41■□□□□ 0.22
SEMA4D-223ENST00000540475 HDAC5Q9UQL6 1122 aa16.41■□□□□ 0.22
SEMA4D-223ENST00000540475 SUGT1Q9Y2Z0 365 aa16.41■□□□□ 0.22
SEMA4D-223ENST00000540475 BCAMP50895 628 aa16.4■□□□□ 0.22
SEMA4D-223ENST00000540475 LPIN2Q92539 896 aa16.4■□□□□ 0.22
SEMA4D-223ENST00000540475 TRPA1O75762 1119 aa16.39■□□□□ 0.21
SEMA4D-223ENST00000540475 IFIT1P09914 478 aaKnown RBP16.39■□□□□ 0.21
SEMA4D-223ENST00000540475 TTLL12Q14166 644 aaPredicted RBP16.39■□□□□ 0.21
SEMA4D-223ENST00000540475 GRIK5Q16478 980 aa16.39■□□□□ 0.21
SEMA4D-223ENST00000540475 SUPT20HL1Q3ZLR7 823 aa16.39■□□□□ 0.21
SEMA4D-223ENST00000540475 VPS37DQ86XT2 251 aa16.39■□□□□ 0.21
SEMA4D-223ENST00000540475 DZIP1LQ8IYY4 767 aaKnown RBP16.39■□□□□ 0.21
SEMA4D-223ENST00000540475 CFHR5Q9BXR6 569 aa16.39■□□□□ 0.21
SEMA4D-223ENST00000540475 COPRSQ9NQ92 184 aa16.39■□□□□ 0.21
SEMA4D-223ENST00000540475 CLRN2A0PK11 232 aa16.38■□□□□ 0.21
SEMA4D-223ENST00000540475 PPP1R12BO60237 982 aaPredicted RBP16.38■□□□□ 0.21
SEMA4D-223ENST00000540475 CRKP46108 304 aa16.38■□□□□ 0.21
SEMA4D-223ENST00000540475 RASA3Q14644 834 aa16.38■□□□□ 0.21
SEMA4D-223ENST00000540475 NOM1Q5C9Z4 860 aaKnown RBP16.38■□□□□ 0.21
SEMA4D-223ENST00000540475 ZNF70Q9UC06 446 aaPredicted RBP16.38■□□□□ 0.21
SEMA4D-223ENST00000540475 ANGEL1Q9UNK9 670 aaKnown RBP16.38■□□□□ 0.21
SEMA4D-223ENST00000540475 OTOFQ9HC10 1997 aa16.38■□□□□ 0.21
SEMA4D-223ENST00000540475 USP2O75604 605 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms