RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 SNAP23O00161 211 aa15.23■□□□□ 0.03
CBX3P4-202ENST00000540428 GRM8O00222 908 aa15.23■□□□□ 0.03
CBX3P4-202ENST00000540428 TBC1D8O95759 1140 aa15.23■□□□□ 0.03
CBX3P4-202ENST00000540428 LMBR1LQ6UX01 489 aa15.23■□□□□ 0.03
CBX3P4-202ENST00000540428 HELBQ8NG08 1087 aaPredicted RBP15.23■□□□□ 0.03
CBX3P4-202ENST00000540428 ANGEL1Q9UNK9 670 aaKnown RBP15.23■□□□□ 0.03
CBX3P4-202ENST00000540428 CHMP3Q9Y3E7 222 aa15.23■□□□□ 0.03
CBX3P4-202ENST00000540428 SALL2Q9Y467 1007 aaPredicted RBP15.23■□□□□ 0.03
CBX3P4-202ENST00000540428 SPDYE2BA6NHP3 402 aa15.22■□□□□ 0.03
CBX3P4-202ENST00000540428 MYO1BO43795 1136 aa15.22■□□□□ 0.03
CBX3P4-202ENST00000540428 ALDH1L1O75891 902 aa15.22■□□□□ 0.03
CBX3P4-202ENST00000540428 ALDH1A1P00352 501 aa15.22■□□□□ 0.03
CBX3P4-202ENST00000540428 SPDYE6P0CI01 402 aa15.22■□□□□ 0.03
CBX3P4-202ENST00000540428 INHBEP58166 350 aa15.22■□□□□ 0.03
CBX3P4-202ENST00000540428 TAF7LQ5H9L4 462 aa15.22■□□□□ 0.03
CBX3P4-202ENST00000540428 EPHA10Q5JZY3 1008 aa15.22■□□□□ 0.03
CBX3P4-202ENST00000540428 SPRYD7Q5W111 196 aa15.22■□□□□ 0.03
CBX3P4-202ENST00000540428 LDHAL6AQ6ZMR3 332 aa15.22■□□□□ 0.03
CBX3P4-202ENST00000540428 HPS5Q9UPZ3 1129 aa15.22■□□□□ 0.03
CBX3P4-202ENST00000540428 MANSC4A6NHS7 340 aaPredicted RBP15.21■□□□□ 0.03
CBX3P4-202ENST00000540428 PPP1R12BO60237 982 aaPredicted RBP15.21■□□□□ 0.03
CBX3P4-202ENST00000540428 SOX10P56693 466 aa15.21■□□□□ 0.03
CBX3P4-202ENST00000540428 MKRN3Q13064 507 aaKnown RBP15.21■□□□□ 0.03
CBX3P4-202ENST00000540428 PRKG1Q13976 671 aa15.21■□□□□ 0.03
CBX3P4-202ENST00000540428 SUPT20HL1Q3ZLR7 823 aa15.21■□□□□ 0.03
CBX3P4-202ENST00000540428 CFAP100Q494V2 611 aa15.21■□□□□ 0.03
CBX3P4-202ENST00000540428 SPINK5Q9NQ38 1064 aaPredicted RBP15.21■□□□□ 0.03
CBX3P4-202ENST00000540428 CNNM1Q9NRU3 951 aa15.21■□□□□ 0.03
CBX3P4-202ENST00000540428 C9orf78Q9NZ63 289 aaPredicted RBP15.21■□□□□ 0.03
CBX3P4-202ENST00000540428 FAM205AQ6ZU69 1335 aa15.2■□□□□ 0.02
CBX3P4-202ENST00000540428 F8W031 263 aaPredicted RBP15.2■□□□□ 0.02
CBX3P4-202ENST00000540428 ZBTB48P10074 688 aaPredicted RBP15.2■□□□□ 0.02
CBX3P4-202ENST00000540428 UBE4AQ14139 1066 aa15.2■□□□□ 0.02
CBX3P4-202ENST00000540428 SLC10A4Q96EP9 437 aa15.2■□□□□ 0.02
CBX3P4-202ENST00000540428 ZNF594Q96JF6 807 aaPredicted RBP15.2■□□□□ 0.02
CBX3P4-202ENST00000540428 FKTNO75072 461 aa15.19■□□□□ 0.02
CBX3P4-202ENST00000540428 FBXO46Q6PJ61 603 aaPredicted RBP15.19■□□□□ 0.02
CBX3P4-202ENST00000540428 PRMT6Q96LA8 375 aaPredicted RBP15.19■□□□□ 0.02
CBX3P4-202ENST00000540428 SRCIN1Q9C0H9 1055 aa15.19■□□□□ 0.02
CBX3P4-202ENST00000540428 TDRD7Q8NHU6 1098 aaKnown RBP15.18■□□□□ 0.02
CBX3P4-202ENST00000540428 PCDHAC2Q9Y5I4 1007 aa15.18■□□□□ 0.02
CBX3P4-202ENST00000540428 SSC5DA1L4H1 1573 aa15.18■□□□□ 0.02
CBX3P4-202ENST00000540428 CLRN2A0PK11 232 aa15.17■□□□□ 0.02
CBX3P4-202ENST00000540428 PLIN1O60240 522 aa15.17■□□□□ 0.02
CBX3P4-202ENST00000540428 HIBADHP31937 336 aaKnown RBP15.17■□□□□ 0.02
CBX3P4-202ENST00000540428 ZEB1P37275 1124 aaPredicted RBP15.17■□□□□ 0.02
CBX3P4-202ENST00000540428 IREB2P48200 963 aaKnown RBP15.17■□□□□ 0.02
CBX3P4-202ENST00000540428 TNFAIP1Q13829 316 aa15.17■□□□□ 0.02
CBX3P4-202ENST00000540428 SLC4A10Q6U841 1118 aa15.17■□□□□ 0.02
CBX3P4-202ENST00000540428 IFNL1Q8IU54 200 aa15.17■□□□□ 0.02
CBX3P4-202ENST00000540428 WNK4Q96J92 1243 aa15.17■□□□□ 0.02
CBX3P4-202ENST00000540428 VEZTQ9HBM0 779 aa15.17■□□□□ 0.02
CBX3P4-202ENST00000540428 SERPINA10Q9UK55 444 aa15.17■□□□□ 0.02
CBX3P4-202ENST00000540428 FZD1Q9UP38 647 aa15.17■□□□□ 0.02
CBX3P4-202ENST00000540428 UTYO14607 1347 aa15.17■□□□□ 0.02
CBX3P4-202ENST00000540428 MROH5Q6ZUA9 1318 aa15.17■□□□□ 0.02
CBX3P4-202ENST00000540428 A0A1B0GUL6 1792 aa15.16■□□□□ 0.02
CBX3P4-202ENST00000540428 RBM5P52756 815 aaKnown RBP eCLIP15.16■□□□□ 0.02
CBX3P4-202ENST00000540428 RASA3Q14644 834 aa15.16■□□□□ 0.02
CBX3P4-202ENST00000540428 SPDYE2Q495Y8 402 aa15.16■□□□□ 0.02
CBX3P4-202ENST00000540428 MFSD14BQ5SR56 506 aa15.16■□□□□ 0.02
CBX3P4-202ENST00000540428 NBPF12Q5TAG4 269 aaPredicted RBP15.16■□□□□ 0.02
CBX3P4-202ENST00000540428 ANKRD13AQ8IZ07 590 aa15.16■□□□□ 0.02
CBX3P4-202ENST00000540428 KAZALD1Q96I82 304 aa15.16■□□□□ 0.02
CBX3P4-202ENST00000540428 SUCLG2Q96I99 432 aa15.16■□□□□ 0.02
CBX3P4-202ENST00000540428 R3HDMLQ9H3Y0 253 aa15.16■□□□□ 0.02
CBX3P4-202ENST00000540428 JAG2Q9Y219 1238 aa15.16■□□□□ 0.02
CBX3P4-202ENST00000540428 ZNF316A6NFI3 1004 aaPredicted RBP15.15■□□□□ 0.02
CBX3P4-202ENST00000540428 USP2O75604 605 aaPredicted RBP15.15■□□□□ 0.02
CBX3P4-202ENST00000540428 RABL6Q3YEC7 729 aaPredicted RBP15.15■□□□□ 0.02
CBX3P4-202ENST00000540428 CLMNQ96JQ2 1002 aa15.15■□□□□ 0.02
CBX3P4-202ENST00000540428 FAM84BQ96KN1 310 aaPredicted RBP15.15■□□□□ 0.02
CBX3P4-202ENST00000540428 TTF2Q9UNY4 1162 aaKnown RBP15.15■□□□□ 0.02
CBX3P4-202ENST00000540428 RIPOR2Q9Y4F9 1068 aa15.15■□□□□ 0.02
CBX3P4-202ENST00000540428 AOX1Q06278 1338 aa15.15■□□□□ 0.02
CBX3P4-202ENST00000540428 NBPF7P0C2Y1 421 aaPredicted RBP15.14■□□□□ 0.01
CBX3P4-202ENST00000540428 GYG1P46976 350 aa15.14■□□□□ 0.01
CBX3P4-202ENST00000540428 OTUD7BQ6GQQ9 843 aa15.14■□□□□ 0.01
CBX3P4-202ENST00000540428 PUS3Q9BZE2 481 aaKnown RBP15.14■□□□□ 0.01
CBX3P4-202ENST00000540428 ZNF70Q9UC06 446 aaPredicted RBP15.14■□□□□ 0.01
CBX3P4-202ENST00000540428 ZNF521Q96K83 1311 aa15.14■□□□□ 0.01
CBX3P4-202ENST00000540428 ECM29Q5VYK3 1845 aa15.13■□□□□ 0.01
CBX3P4-202ENST00000540428 TESPA1A2RU30 521 aaPredicted RBP15.13■□□□□ 0.01
CBX3P4-202ENST00000540428 IGF2BP3O00425 579 aaKnown RBP eCLIP15.13■□□□□ 0.01
CBX3P4-202ENST00000540428 HDLBPQ00341 1268 aaKnown RBP15.13■□□□□ 0.01
CBX3P4-202ENST00000540428 FBXO33Q7Z6M2 555 aa15.13■□□□□ 0.01
CBX3P4-202ENST00000540428 DZIP1LQ8IYY4 767 aaKnown RBP15.13■□□□□ 0.01
CBX3P4-202ENST00000540428 FAM9BQ8IZU0 186 aa15.13■□□□□ 0.01
CBX3P4-202ENST00000540428 PRPF38BQ5VTL8 546 aaKnown RBP15.12■□□□□ 0.01
CBX3P4-202ENST00000540428 TBC1D22AQ8WUA7 517 aa15.12■□□□□ 0.01
CBX3P4-202ENST00000540428 BICC1Q9H694 974 aaKnown RBP15.12■□□□□ 0.01
CBX3P4-202ENST00000540428 TDRD3Q9H7E2 651 aaKnown RBP15.12■□□□□ 0.01
CBX3P4-202ENST00000540428 PTPRCP08575 1304 aa15.12■□□□□ 0.01
CBX3P4-202ENST00000540428 GJA5P36382 358 aa15.11■□□□□ 0.01
CBX3P4-202ENST00000540428 CRKP46108 304 aa15.11■□□□□ 0.01
CBX3P4-202ENST00000540428 TNNI2P48788 182 aa15.11■□□□□ 0.01
CBX3P4-202ENST00000540428 CAVIN4Q5BKX8 364 aa15.11■□□□□ 0.01
CBX3P4-202ENST00000540428 VPS37DQ86XT2 251 aa15.11■□□□□ 0.01
CBX3P4-202ENST00000540428 MRPL50Q8N5N7 158 aaKnown RBP15.11■□□□□ 0.01
CBX3P4-202ENST00000540428 ERO1AQ96HE7 468 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms