RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 PLIN1O60240 522 aa18.13■□□□□ 0.49
SEMA4D-222ENST00000540183 SLC34A2O95436 690 aa18.13■□□□□ 0.49
SEMA4D-222ENST00000540183 TM4SF4P48230 202 aa18.13■□□□□ 0.49
SEMA4D-222ENST00000540183 IFIT5Q13325 482 aaKnown RBP18.13■□□□□ 0.49
SEMA4D-222ENST00000540183 LMBR1LQ6UX01 489 aa18.13■□□□□ 0.49
SEMA4D-222ENST00000540183 ANGEL1Q9UNK9 670 aaKnown RBP18.13■□□□□ 0.49
SEMA4D-222ENST00000540183 DLGAP5Q15398 846 aa18.12■□□□□ 0.49
SEMA4D-222ENST00000540183 NCBP3Q53F19 620 aaKnown RBP18.12■□□□□ 0.49
SEMA4D-222ENST00000540183 ARMC9Q7Z3E5 817 aa18.12■□□□□ 0.49
SEMA4D-222ENST00000540183 WDR63Q8IWG1 891 aa18.12■□□□□ 0.49
SEMA4D-222ENST00000540183 HPS5Q9UPZ3 1129 aa18.12■□□□□ 0.49
SEMA4D-222ENST00000540183 CLRN2A0PK11 232 aa18.11■□□□□ 0.49
SEMA4D-222ENST00000540183 CFAP100Q494V2 611 aa18.11■□□□□ 0.49
SEMA4D-222ENST00000540183 LDLRAD1Q5T700 205 aa18.11■□□□□ 0.49
SEMA4D-222ENST00000540183 C15orf52Q6ZUT6 534 aaKnown RBP18.11■□□□□ 0.49
SEMA4D-222ENST00000540183 CLMNQ96JQ2 1002 aa18.11■□□□□ 0.49
SEMA4D-222ENST00000540183 DEFB129Q9H1M3 183 aa18.11■□□□□ 0.49
SEMA4D-222ENST00000540183 COL1A1P02452 1464 aaPredicted RBP18.1■□□□□ 0.49
SEMA4D-222ENST00000540183 GPR25O00155 361 aa18.1■□□□□ 0.49
SEMA4D-222ENST00000540183 IL1R1P14778 569 aa18.1■□□□□ 0.49
SEMA4D-222ENST00000540183 MMP14P50281 582 aa18.1■□□□□ 0.49
SEMA4D-222ENST00000540183 SPRYD7Q5W111 196 aa18.1■□□□□ 0.49
SEMA4D-222ENST00000540183 PRMT6Q96LA8 375 aaPredicted RBP18.1■□□□□ 0.49
SEMA4D-222ENST00000540183 ZNF804AQ7Z570 1209 aa18.09■□□□□ 0.49
SEMA4D-222ENST00000540183 GRM8O00222 908 aa18.08■□□□□ 0.48
SEMA4D-222ENST00000540183 LDHAL6AQ6ZMR3 332 aa18.08■□□□□ 0.48
SEMA4D-222ENST00000540183 MTMR14Q8NCE2 650 aa18.08■□□□□ 0.48
SEMA4D-222ENST00000540183 PUS3Q9BZE2 481 aaKnown RBP18.08■□□□□ 0.48
SEMA4D-222ENST00000540183 SPDYE2BA6NHP3 402 aa18.07■□□□□ 0.48
SEMA4D-222ENST00000540183 SPDYE6P0CI01 402 aa18.07■□□□□ 0.48
SEMA4D-222ENST00000540183 SREBF2Q12772 1141 aa18.07■□□□□ 0.48
SEMA4D-222ENST00000540183 CCDC57Q2TAC2 916 aa18.07■□□□□ 0.48
SEMA4D-222ENST00000540183 TAF7LQ5H9L4 462 aa18.07■□□□□ 0.48
SEMA4D-222ENST00000540183 NBPF12Q5TAG4 269 aaPredicted RBP18.07■□□□□ 0.48
SEMA4D-222ENST00000540183 SLC4A10Q6U841 1118 aa18.07■□□□□ 0.48
SEMA4D-222ENST00000540183 KAZALD1Q96I82 304 aa18.07■□□□□ 0.48
SEMA4D-222ENST00000540183 SUCLG2Q96I99 432 aa18.07■□□□□ 0.48
SEMA4D-222ENST00000540183 VEZTQ9HBM0 779 aa18.07■□□□□ 0.48
SEMA4D-222ENST00000540183 CNNM1Q9NRU3 951 aa18.07■□□□□ 0.48
SEMA4D-222ENST00000540183 ANP32CO43423 234 aa18.06■□□□□ 0.48
SEMA4D-222ENST00000540183 GYG1P46976 350 aa18.06■□□□□ 0.48
SEMA4D-222ENST00000540183 SLC10A4Q96EP9 437 aa18.06■□□□□ 0.48
SEMA4D-222ENST00000540183 WNK4Q96J92 1243 aa18.06■□□□□ 0.48
SEMA4D-222ENST00000540183 C9orf78Q9NZ63 289 aaPredicted RBP18.06■□□□□ 0.48
SEMA4D-222ENST00000540183 HTTP42858 3142 aa18.06■□□□□ 0.48
SEMA4D-222ENST00000540183 MYH13Q9UKX3 1938 aa18.06■□□□□ 0.48
SEMA4D-222ENST00000540183 GJA5P36382 358 aa18.05■□□□□ 0.48
SEMA4D-222ENST00000540183 RBM5P52756 815 aaKnown RBP eCLIP18.05■□□□□ 0.48
SEMA4D-222ENST00000540183 MAP3K11Q16584 847 aa18.05■□□□□ 0.48
SEMA4D-222ENST00000540183 FAM9BQ8IZU0 186 aa18.05■□□□□ 0.48
SEMA4D-222ENST00000540183 CENPFP49454 3210 aa18.04■□□□□ 0.48
SEMA4D-222ENST00000540183 IGF2BP3O00425 579 aaKnown RBP eCLIP18.04■□□□□ 0.48
SEMA4D-222ENST00000540183 FKTNO75072 461 aa18.04■□□□□ 0.48
SEMA4D-222ENST00000540183 FKBP1AP62942 108 aaKnown RBP18.04■□□□□ 0.48
SEMA4D-222ENST00000540183 IFNL1Q8IU54 200 aa18.04■□□□□ 0.48
SEMA4D-222ENST00000540183 CDAN1Q8IWY9 1227 aa18.04■□□□□ 0.48
SEMA4D-222ENST00000540183 SRCIN1Q9C0H9 1055 aa18.04■□□□□ 0.48
SEMA4D-222ENST00000540183 FAM205AQ6ZU69 1335 aa18.03■□□□□ 0.48
SEMA4D-222ENST00000540183 MYO1BO43795 1136 aa18.03■□□□□ 0.48
SEMA4D-222ENST00000540183 USP2O75604 605 aaPredicted RBP18.03■□□□□ 0.48
SEMA4D-222ENST00000540183 ALDH1L1O75891 902 aa18.03■□□□□ 0.48
SEMA4D-222ENST00000540183 NBPF7P0C2Y1 421 aaPredicted RBP18.03■□□□□ 0.48
SEMA4D-222ENST00000540183 RASA3Q14644 834 aa18.03■□□□□ 0.48
SEMA4D-222ENST00000540183 GRIK5Q16478 980 aa18.03■□□□□ 0.48
SEMA4D-222ENST00000540183 PKN2Q16513 984 aaKnown RBP18.03■□□□□ 0.48
SEMA4D-222ENST00000540183 NOM1Q5C9Z4 860 aaKnown RBP18.03■□□□□ 0.48
SEMA4D-222ENST00000540183 TDRD7Q8NHU6 1098 aaKnown RBP18.03■□□□□ 0.48
SEMA4D-222ENST00000540183 FAM84BQ96KN1 310 aaPredicted RBP18.03■□□□□ 0.48
SEMA4D-222ENST00000540183 CFHR5Q9BXR6 569 aa18.03■□□□□ 0.48
SEMA4D-222ENST00000540183 PPP2R3BQ9Y5P8 575 aa18.03■□□□□ 0.48
SEMA4D-222ENST00000540183 PPP1R12BO60237 982 aaPredicted RBP18.02■□□□□ 0.48
SEMA4D-222ENST00000540183 MFSD14BQ5SR56 506 aa18.02■□□□□ 0.48
SEMA4D-222ENST00000540183 FBXO46Q6PJ61 603 aaPredicted RBP18.02■□□□□ 0.48
SEMA4D-222ENST00000540183 TDRD3Q9H7E2 651 aaKnown RBP18.02■□□□□ 0.48
SEMA4D-222ENST00000540183 ZNF70Q9UC06 446 aaPredicted RBP18.02■□□□□ 0.48
SEMA4D-222ENST00000540183 TTF2Q9UNY4 1162 aaKnown RBP18.02■□□□□ 0.48
SEMA4D-222ENST00000540183 IQSEC3Q9UPP2 1182 aaPredicted RBP18.02■□□□□ 0.48
SEMA4D-222ENST00000540183 MANSC4A6NHS7 340 aaPredicted RBP18.01■□□□□ 0.47
SEMA4D-222ENST00000540183 HIBADHP31937 336 aaKnown RBP18.01■□□□□ 0.47
SEMA4D-222ENST00000540183 SUPT20HL1Q3ZLR7 823 aa18.01■□□□□ 0.47
SEMA4D-222ENST00000540183 ZSWIM8A7E2V4 1837 aa18■□□□□ 0.47
SEMA4D-222ENST00000540183 ZBTB48P10074 688 aaPredicted RBP18■□□□□ 0.47
SEMA4D-222ENST00000540183 UBE4AQ14139 1066 aa18■□□□□ 0.47
SEMA4D-222ENST00000540183 SPDYE2Q495Y8 402 aa18■□□□□ 0.47
SEMA4D-222ENST00000540183 LRRC24Q50LG9 513 aa18■□□□□ 0.47
SEMA4D-222ENST00000540183 BICC1Q9H694 974 aaKnown RBP18■□□□□ 0.47
SEMA4D-222ENST00000540183 RIPOR2Q9Y4F9 1068 aa18■□□□□ 0.47
SEMA4D-222ENST00000540183 TCP10L2B9ZVM9 353 aa17.99■□□□□ 0.47
SEMA4D-222ENST00000540183 IREB2P48200 963 aaKnown RBP17.99■□□□□ 0.47
SEMA4D-222ENST00000540183 CAP1Q01518 475 aa17.99■□□□□ 0.47
SEMA4D-222ENST00000540183 ANKRD44Q8N8A2 993 aa17.99■□□□□ 0.47
SEMA4D-222ENST00000540183 KLHDC4Q8TBB5 520 aa17.99■□□□□ 0.47
SEMA4D-222ENST00000540183 CNKSR2Q8WXI2 1034 aa17.99■□□□□ 0.47
SEMA4D-222ENST00000540183 TEPSINQ96N21 525 aa17.99■□□□□ 0.47
SEMA4D-222ENST00000540183 ELP3Q9H9T3 547 aa17.99■□□□□ 0.47
SEMA4D-222ENST00000540183 RBBP6Q7Z6E9 1792 aaKnown RBP17.99■□□□□ 0.47
SEMA4D-222ENST00000540183 ZNF316A6NFI3 1004 aaPredicted RBP17.98■□□□□ 0.47
SEMA4D-222ENST00000540183 ALDH1A1P00352 501 aa17.98■□□□□ 0.47
SEMA4D-222ENST00000540183 CHAF1AQ13111 956 aaPredicted RBP17.98■□□□□ 0.47
SEMA4D-222ENST00000540183 CRHR2Q13324 411 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms