RNA–Protein interactions for RNA: ENST00000539463.1

DENR-204, Transcript of density regulated re-initiation and release factor, human

TSL 2

Gene DENR, Length 671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENR-204	ENST00000539463	POLR2A	P24928	1970 aa	Known RBP	32.26	■■■□□ 2.75
DENR-204	ENST00000539463	PITPNM2	Q9BZ72	1349 aa		32.26	■■■□□ 2.75
DENR-204	ENST00000539463	ZKSCAN2	Q63HK3	967 aa		32.25	■■■□□ 2.75
DENR-204	ENST00000539463	ATG9A	Q7Z3C6	839 aa		32.25	■■■□□ 2.75
DENR-204	ENST00000539463	FAM205A	Q6ZU69	1335 aa		32.25	■■■□□ 2.75
DENR-204	ENST00000539463	FGFR2	P21802	821 aa		32.23	■■■□□ 2.75
DENR-204	ENST00000539463	CYP4F22	Q6NT55	531 aa		32.23	■■■□□ 2.75
DENR-204	ENST00000539463	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	32.23	■■■□□ 2.75
DENR-204	ENST00000539463	CAPNS2	Q96L46	248 aa		32.23	■■■□□ 2.75
DENR-204	ENST00000539463	SIL1	Q9H173	461 aa		32.23	■■■□□ 2.75
DENR-204	ENST00000539463	FBXO3	Q9UK99	471 aa		32.23	■■■□□ 2.75
DENR-204	ENST00000539463	PUM3	Q15397	648 aa	Known RBP	32.22	■■■□□ 2.75
DENR-204	ENST00000539463	VPS37D	Q86XT2	251 aa		32.22	■■■□□ 2.75
DENR-204	ENST00000539463	ZBED3	Q96IU2	234 aa	Predicted RBP	32.22	■■■□□ 2.75
DENR-204	ENST00000539463	HHIPL1	Q96JK4	782 aa		32.22	■■■□□ 2.75
DENR-204	ENST00000539463	CIAO1	O76071	339 aa		32.21	■■■□□ 2.75
DENR-204	ENST00000539463	ECE1	P42892	770 aa		32.21	■■■□□ 2.75
DENR-204	ENST00000539463	CAVIN4	Q5BKX8	364 aa		32.21	■■■□□ 2.75
DENR-204	ENST00000539463	CDCA5	Q96FF9	252 aa		32.21	■■■□□ 2.75
DENR-204	ENST00000539463	SCAF8	Q9UPN6	1271 aa	Known RBP	32.21	■■■□□ 2.75
DENR-204	ENST00000539463		F8W031	263 aa	Predicted RBP	32.2	■■■□□ 2.75
DENR-204	ENST00000539463	TMEM57	Q8N5G2	664 aa		32.2	■■■□□ 2.75
DENR-204	ENST00000539463	GBA2	Q9HCG7	927 aa	Predicted RBP	32.2	■■■□□ 2.75
DENR-204	ENST00000539463	PA2G4	Q9UQ80	394 aa	Known RBP	32.2	■■■□□ 2.75
DENR-204	ENST00000539463	GRM1	Q13255	1194 aa		32.19	■■■□□ 2.74
DENR-204	ENST00000539463	C2orf69	Q8N8R5	385 aa		32.19	■■■□□ 2.74
DENR-204	ENST00000539463	COPRS	Q9NQ92	184 aa		32.19	■■■□□ 2.74
DENR-204	ENST00000539463	IFIT1	P09914	478 aa	Known RBP	32.18	■■■□□ 2.74
DENR-204	ENST00000539463	BCAM	P50895	628 aa		32.18	■■■□□ 2.74
DENR-204	ENST00000539463	MTX1	Q13505	466 aa		32.18	■■■□□ 2.74
DENR-204	ENST00000539463	DLGAP5	Q15398	846 aa		32.18	■■■□□ 2.74
DENR-204	ENST00000539463	MFSD14B	Q5SR56	506 aa		32.18	■■■□□ 2.74
DENR-204	ENST00000539463	MTMR14	Q8NCE2	650 aa		32.18	■■■□□ 2.74
DENR-204	ENST00000539463	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	32.18	■■■□□ 2.74
DENR-204	ENST00000539463	HUNK	P57058	714 aa		32.17	■■■□□ 2.74
DENR-204	ENST00000539463	LPIN2	Q92539	896 aa		32.17	■■■□□ 2.74
DENR-204	ENST00000539463	GNAI2	P04899	355 aa		32.16	■■■□□ 2.74
DENR-204	ENST00000539463	IL15	P40933	162 aa	Predicted RBP	32.16	■■■□□ 2.74
DENR-204	ENST00000539463	CEP126	Q9P2H0	1117 aa		32.16	■■■□□ 2.74
DENR-204	ENST00000539463	PCDHAC2	Q9Y5I4	1007 aa		32.16	■■■□□ 2.74
DENR-204	ENST00000539463	SRGAP3	O43295	1099 aa		32.15	■■■□□ 2.74
DENR-204	ENST00000539463	SLC5A1	P13866	664 aa		32.15	■■■□□ 2.74
DENR-204	ENST00000539463	WBP1L	Q9NX94	342 aa		32.15	■■■□□ 2.74
DENR-204	ENST00000539463	FRAT2	O75474	233 aa	Predicted RBP	32.14	■■■□□ 2.74
DENR-204	ENST00000539463	CFAP100	Q494V2	611 aa		32.14	■■■□□ 2.74
DENR-204	ENST00000539463	AOC2	O75106	756 aa		32.13	■■■□□ 2.73
DENR-204	ENST00000539463	PRAMEF18	Q5VWM3	479 aa		32.13	■■■□□ 2.73
DENR-204	ENST00000539463	DZIP1L	Q8IYY4	767 aa	Known RBP	32.13	■■■□□ 2.73
DENR-204	ENST00000539463	SPDYE2B	A6NHP3	402 aa		32.12	■■■□□ 2.73
DENR-204	ENST00000539463	SPDYE6	P0CI01	402 aa		32.12	■■■□□ 2.73
DENR-204	ENST00000539463	CHAF1A	Q13111	956 aa	Predicted RBP	32.12	■■■□□ 2.73
DENR-204	ENST00000539463	APOBEC3F	Q8IUX4	373 aa	Known RBP	32.12	■■■□□ 2.73
DENR-204	ENST00000539463	PRMT6	Q96LA8	375 aa	Predicted RBP	32.12	■■■□□ 2.73
DENR-204	ENST00000539463	TTF2	Q9UNY4	1162 aa	Known RBP	32.12	■■■□□ 2.73
DENR-204	ENST00000539463	FOXN1	O15353	648 aa		32.11	■■■□□ 2.73
DENR-204	ENST00000539463	MAP2K2	P36507	400 aa		32.11	■■■□□ 2.73
DENR-204	ENST00000539463	MAP2K1	Q02750	393 aa	Predicted RBP	32.11	■■■□□ 2.73
DENR-204	ENST00000539463	ATP2B3	Q16720	1220 aa		32.11	■■■□□ 2.73
DENR-204	ENST00000539463	FTSJ3	Q8IY81	847 aa	Known RBP	32.11	■■■□□ 2.73
DENR-204	ENST00000539463	RLBP1	P12271	317 aa		32.1	■■■□□ 2.73
DENR-204	ENST00000539463	AIDA	Q96BJ3	306 aa		32.1	■■■□□ 2.73
DENR-204	ENST00000539463	THSD7B	Q9C0I4	1608 aa		32.1	■■■□□ 2.73
DENR-204	ENST00000539463	RBM5	P52756	815 aa	Known RBP eCLIP	32.09	■■■□□ 2.73
DENR-204	ENST00000539463	GRIK5	Q16478	980 aa		32.09	■■■□□ 2.73
DENR-204	ENST00000539463	COL13A1	Q5TAT6	717 aa	Predicted RBP	32.09	■■■□□ 2.73
DENR-204	ENST00000539463	TBC1D22A	Q8WUA7	517 aa		32.09	■■■□□ 2.73
DENR-204	ENST00000539463	RGMB	Q6NW40	437 aa		32.08	■■■□□ 2.73
DENR-204	ENST00000539463	SERPINA10	Q9UK55	444 aa		32.08	■■■□□ 2.73
DENR-204	ENST00000539463	AOX1	Q06278	1338 aa		32.07	■■■□□ 2.72
DENR-204	ENST00000539463	PNMA6E	A0A0J9YXQ4	647 aa		32.07	■■■□□ 2.72
DENR-204	ENST00000539463	MYO1B	O43795	1136 aa		32.07	■■■□□ 2.72
DENR-204	ENST00000539463	FKBP1B	P68106	108 aa		32.07	■■■□□ 2.72
DENR-204	ENST00000539463	CLRN2	A0PK11	232 aa		32.06	■■■□□ 2.72
DENR-204	ENST00000539463	ITPRIP	Q8IWB1	547 aa		32.06	■■■□□ 2.72
DENR-204	ENST00000539463	FAM155A	B1AL88	458 aa	Predicted RBP	32.05	■■■□□ 2.72
DENR-204	ENST00000539463	DEFB129	Q9H1M3	183 aa		32.05	■■■□□ 2.72
DENR-204	ENST00000539463	ZBTB7B	O15156	539 aa	Predicted RBP	32.04	■■■□□ 2.72
DENR-204	ENST00000539463	ZNF157	P51786	506 aa	Predicted RBP	32.04	■■■□□ 2.72
DENR-204	ENST00000539463	MOB2	Q70IA6	237 aa		32.04	■■■□□ 2.72
DENR-204	ENST00000539463	CCDC102A	Q96A19	550 aa		32.04	■■■□□ 2.72
DENR-204	ENST00000539463	CRK	P46108	304 aa		32.03	■■■□□ 2.72
DENR-204	ENST00000539463	CTCF	P49711	727 aa	Predicted RBP	32.03	■■■□□ 2.72
DENR-204	ENST00000539463	TFCP2	Q12800	502 aa		32.03	■■■□□ 2.72
DENR-204	ENST00000539463	NOG	Q13253	232 aa		32.03	■■■□□ 2.72
DENR-204	ENST00000539463	ZIC5	Q96T25	663 aa		32.03	■■■□□ 2.72
DENR-204	ENST00000539463	ARAP2	Q8WZ64	1704 aa		32.03	■■■□□ 2.72
DENR-204	ENST00000539463	PAPPA2	Q9BXP8	1791 aa		32.02	■■■□□ 2.72
DENR-204	ENST00000539463	NF2	P35240	595 aa		32.02	■■■□□ 2.72
DENR-204	ENST00000539463	TIMM10	P62072	90 aa		32.02	■■■□□ 2.72
DENR-204	ENST00000539463	GNL3L	Q9NVN8	582 aa	Known RBP	32.02	■■■□□ 2.72
DENR-204	ENST00000539463	UBE2Q2L	H0YL09	131 aa		32.01	■■■□□ 2.71
DENR-204	ENST00000539463	ADORA1	P30542	326 aa		32.01	■■■□□ 2.71
DENR-204	ENST00000539463	HDLBP	Q00341	1268 aa	Known RBP	32.01	■■■□□ 2.71
DENR-204	ENST00000539463	WDR66	Q8TBY9	1149 aa		32.01	■■■□□ 2.71
DENR-204	ENST00000539463	PANK1	Q8TE04	598 aa		32.01	■■■□□ 2.71
DENR-204	ENST00000539463	VEZT	Q9HBM0	779 aa		32.01	■■■□□ 2.71
DENR-204	ENST00000539463	SUGT1	Q9Y2Z0	365 aa		32.01	■■■□□ 2.71
DENR-204	ENST00000539463	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	32.01	■■■□□ 2.71
DENR-204	ENST00000539463	COL1A1	P02452	1464 aa	Predicted RBP	32.01	■■■□□ 2.71
DENR-204	ENST00000539463	PHKA1	P46020	1223 aa		32	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms