RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 ZBED3Q96IU2 234 aaPredicted RBP18.75■□□□□ 0.59
LRRK1-211ENST00000538064 PUS3Q9BZE2 481 aaKnown RBP18.75■□□□□ 0.59
LRRK1-211ENST00000538064 RIPOR2Q9Y4F9 1068 aa18.75■□□□□ 0.59
LRRK1-211ENST00000538064 FAM155AB1AL88 458 aaPredicted RBP18.74■□□□□ 0.59
LRRK1-211ENST00000538064 CA12O43570 354 aa18.74■□□□□ 0.59
LRRK1-211ENST00000538064 APOBEC3FQ8IUX4 373 aaKnown RBP18.73■□□□□ 0.59
LRRK1-211ENST00000538064 CCDC102AQ96A19 550 aa18.73■□□□□ 0.59
LRRK1-211ENST00000538064 FAM205AQ6ZU69 1335 aa18.73■□□□□ 0.59
LRRK1-211ENST00000538064 SLC10A3P09131 477 aa18.72■□□□□ 0.59
LRRK1-211ENST00000538064 MTMR14Q8NCE2 650 aa18.72■□□□□ 0.59
LRRK1-211ENST00000538064 SCAF8Q9UPN6 1271 aaKnown RBP18.72■□□□□ 0.59
LRRK1-211ENST00000538064 GYG1P46976 350 aa18.71■□□□□ 0.59
LRRK1-211ENST00000538064 ZNF157P51786 506 aaPredicted RBP18.71■□□□□ 0.59
LRRK1-211ENST00000538064 LRRC24Q50LG9 513 aa18.71■□□□□ 0.59
LRRK1-211ENST00000538064 METTL24Q5JXM2 366 aa18.71■□□□□ 0.59
LRRK1-211ENST00000538064 VGLL2Q8N8G2 317 aa18.71■□□□□ 0.59
LRRK1-211ENST00000538064 TDRD7Q8NHU6 1098 aaKnown RBP18.71■□□□□ 0.59
LRRK1-211ENST00000538064 ZIC5Q96T25 663 aa18.71■□□□□ 0.59
LRRK1-211ENST00000538064 API5Q9BZZ5 524 aaKnown RBP18.71■□□□□ 0.59
LRRK1-211ENST00000538064 NOB1Q9ULX3 412 aaKnown RBP18.71■□□□□ 0.59
LRRK1-211ENST00000538064 LAMB1P07942 1786 aa18.7■□□□□ 0.58
LRRK1-211ENST00000538064 CASP8AP2Q9UKL3 1982 aa18.7■□□□□ 0.58
LRRK1-211ENST00000538064 HIBADHP31937 336 aaKnown RBP18.7■□□□□ 0.58
LRRK1-211ENST00000538064 DLGAP5Q15398 846 aa18.7■□□□□ 0.58
LRRK1-211ENST00000538064 FAM84BQ96KN1 310 aaPredicted RBP18.7■□□□□ 0.58
LRRK1-211ENST00000538064 JAG2Q9Y219 1238 aa18.7■□□□□ 0.58
LRRK1-211ENST00000538064 KIF16BQ96L93 1317 aa18.7■□□□□ 0.58
LRRK1-211ENST00000538064 RARSP54136 660 aaKnown RBP18.69■□□□□ 0.58
LRRK1-211ENST00000538064 RASAL3Q86YV0 1011 aa18.69■□□□□ 0.58
LRRK1-211ENST00000538064 KLHDC4Q8TBB5 520 aa18.69■□□□□ 0.58
LRRK1-211ENST00000538064 SPDYE2BA6NHP3 402 aa18.68■□□□□ 0.58
LRRK1-211ENST00000538064 F8W031 263 aaPredicted RBP18.68■□□□□ 0.58
LRRK1-211ENST00000538064 CAPN15O75808 1086 aa18.68■□□□□ 0.58
LRRK1-211ENST00000538064 PDE8BO95263 885 aa18.68■□□□□ 0.58
LRRK1-211ENST00000538064 UBTFL1P0CB47 393 aaPredicted RBP18.68■□□□□ 0.58
LRRK1-211ENST00000538064 SPDYE6P0CI01 402 aa18.68■□□□□ 0.58
LRRK1-211ENST00000538064 NF2P35240 595 aa18.68■□□□□ 0.58
LRRK1-211ENST00000538064 RFX5P48382 616 aaPredicted RBP18.68■□□□□ 0.58
LRRK1-211ENST00000538064 CFAP100Q494V2 611 aa18.68■□□□□ 0.58
LRRK1-211ENST00000538064 MFSD14BQ5SR56 506 aa18.68■□□□□ 0.58
LRRK1-211ENST00000538064 PRAMEF18Q5VWM3 479 aa18.68■□□□□ 0.58
LRRK1-211ENST00000538064 TSKSQ9UJT2 592 aa18.68■□□□□ 0.58
LRRK1-211ENST00000538064 KIF23Q02241 960 aaPredicted RBP18.67■□□□□ 0.58
LRRK1-211ENST00000538064 FBXO33Q7Z6M2 555 aa18.67■□□□□ 0.58
LRRK1-211ENST00000538064 SAGE1Q9NXZ1 904 aa18.67■□□□□ 0.58
LRRK1-211ENST00000538064 PPP2R3BQ9Y5P8 575 aa18.67■□□□□ 0.58
LRRK1-211ENST00000538064 OTOFQ9HC10 1997 aa18.67■□□□□ 0.58
LRRK1-211ENST00000538064 SSC5DA1L4H1 1573 aa18.67■□□□□ 0.58
LRRK1-211ENST00000538064 EYA2O00167 538 aa18.66■□□□□ 0.58
LRRK1-211ENST00000538064 MYO1BO43795 1136 aa18.66■□□□□ 0.58
LRRK1-211ENST00000538064 PUM3Q15397 648 aaKnown RBP18.66■□□□□ 0.58
LRRK1-211ENST00000538064 MOB2Q70IA6 237 aa18.66■□□□□ 0.58
LRRK1-211ENST00000538064 VPS37DQ86XT2 251 aa18.66■□□□□ 0.58
LRRK1-211ENST00000538064 ARHGAP45Q92619 1136 aa18.66■□□□□ 0.58
LRRK1-211ENST00000538064 PCDHAC2Q9Y5I4 1007 aa18.66■□□□□ 0.58
LRRK1-211ENST00000538064 PTPN12Q05209 780 aaKnown RBP18.65■□□□□ 0.58
LRRK1-211ENST00000538064 TTLL12Q14166 644 aaPredicted RBP18.65■□□□□ 0.58
LRRK1-211ENST00000538064 CAVIN4Q5BKX8 364 aa18.65■□□□□ 0.58
LRRK1-211ENST00000538064 SERPINA10Q9UK55 444 aa18.65■□□□□ 0.58
LRRK1-211ENST00000538064 HDAC5Q9UQL6 1122 aa18.65■□□□□ 0.58
LRRK1-211ENST00000538064 UBE2Q2LH0YL09 131 aa18.64■□□□□ 0.57
LRRK1-211ENST00000538064 FGFR2P21802 821 aa18.64■□□□□ 0.57
LRRK1-211ENST00000538064 REM2Q8IYK8 340 aaPredicted RBP18.64■□□□□ 0.57
LRRK1-211ENST00000538064 DEFB129Q9H1M3 183 aa18.64■□□□□ 0.57
LRRK1-211ENST00000538064 FBXO3Q9UK99 471 aa18.64■□□□□ 0.57
LRRK1-211ENST00000538064 TTF2Q9UNY4 1162 aaKnown RBP18.64■□□□□ 0.57
LRRK1-211ENST00000538064 AOX1Q06278 1338 aa18.64■□□□□ 0.57
LRRK1-211ENST00000538064 CLRN2A0PK11 232 aa18.63■□□□□ 0.57
LRRK1-211ENST00000538064 CIAO1O76071 339 aa18.63■□□□□ 0.57
LRRK1-211ENST00000538064 TBC1D22AQ8WUA7 517 aa18.63■□□□□ 0.57
LRRK1-211ENST00000538064 PRMT6Q96LA8 375 aaPredicted RBP18.63■□□□□ 0.57
LRRK1-211ENST00000538064 LRRFIP2Q9Y608 721 aaKnown RBP18.63■□□□□ 0.57
LRRK1-211ENST00000538064 IFIT1P09914 478 aaKnown RBP18.62■□□□□ 0.57
LRRK1-211ENST00000538064 RBM5P52756 815 aaKnown RBP eCLIP18.62■□□□□ 0.57
LRRK1-211ENST00000538064 HNRNPUQ00839 825 aaKnown RBP eCLIP18.62■□□□□ 0.57
LRRK1-211ENST00000538064 INTS3Q68E01 1043 aaKnown RBP18.62■□□□□ 0.57
LRRK1-211ENST00000538064 ATG9AQ7Z3C6 839 aa18.62■□□□□ 0.57
LRRK1-211ENST00000538064 ARMC9Q7Z3E5 817 aa18.62■□□□□ 0.57
LRRK1-211ENST00000538064 CSRNP1Q96S65 589 aa18.62■□□□□ 0.57
LRRK1-211ENST00000538064 MEIS3Q99687 375 aa18.62■□□□□ 0.57
LRRK1-211ENST00000538064 VEZTQ9HBM0 779 aa18.62■□□□□ 0.57
LRRK1-211ENST00000538064 IQSEC3Q9UPP2 1182 aaPredicted RBP18.62■□□□□ 0.57
LRRK1-211ENST00000538064 SLC5A1P13866 664 aa18.61■□□□□ 0.57
LRRK1-211ENST00000538064 CHAF1AQ13111 956 aaPredicted RBP18.61■□□□□ 0.57
LRRK1-211ENST00000538064 SPDYE2Q495Y8 402 aa18.61■□□□□ 0.57
LRRK1-211ENST00000538064 LPIN2Q92539 896 aa18.61■□□□□ 0.57
LRRK1-211ENST00000538064 FRAT2O75474 233 aaPredicted RBP18.6■□□□□ 0.57
LRRK1-211ENST00000538064 CRKP46108 304 aa18.6■□□□□ 0.57
LRRK1-211ENST00000538064 BCAMP50895 628 aa18.6■□□□□ 0.57
LRRK1-211ENST00000538064 TNFAIP1Q13829 316 aa18.6■□□□□ 0.57
LRRK1-211ENST00000538064 MAP3K11Q16584 847 aa18.6■□□□□ 0.57
LRRK1-211ENST00000538064 LDLRAD1Q5T700 205 aa18.6■□□□□ 0.57
LRRK1-211ENST00000538064 RNF186Q9NXI6 227 aa18.6■□□□□ 0.57
LRRK1-211ENST00000538064 ANGEL1Q9UNK9 670 aaKnown RBP18.6■□□□□ 0.57
LRRK1-211ENST00000538064 IPO8O15397 1037 aaKnown RBP18.59■□□□□ 0.57
LRRK1-211ENST00000538064 GNAI3P08754 354 aa18.59■□□□□ 0.57
LRRK1-211ENST00000538064 TRIM27P14373 513 aa18.59■□□□□ 0.57
LRRK1-211ENST00000538064 HDLBPQ00341 1268 aaKnown RBP18.59■□□□□ 0.57
LRRK1-211ENST00000538064 PRKG1Q13976 671 aa18.59■□□□□ 0.57
LRRK1-211ENST00000538064 GRIK5Q16478 980 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms