RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 CACTINQ8WUQ7 758 aaKnown RBP6.14□□□□□ -1.43
PTPRD-213ENST00000537002 MRPS27Q92552 414 aaKnown RBP6.14□□□□□ -1.43
PTPRD-213ENST00000537002 CCDC114Q96M63 670 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 NAA15Q9BXJ9 866 aaKnown RBP6.14□□□□□ -1.43
PTPRD-213ENST00000537002 BOLA2Q9H3K6 86 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 CCDC175P0C221 793 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 EVA1CP58658 441 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 STIM1Q13586 685 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 AK9Q5TCS8 1911 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 ABCA6Q8N139 1617 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 TTC39AQ5SRH9 613 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 LRCH2Q5VUJ6 765 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 CC2D1AQ6P1N0 951 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-213ENST00000537002 PSMD1Q99460 953 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 CARD14Q9BXL6 1004 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 USP16Q9Y5T5 823 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 RAD21O60216 631 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 SART3Q15020 963 aaKnown RBP6.14□□□□□ -1.43
PTPRD-213ENST00000537002 NUTM2GQ5VZR2 741 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 TRIM22Q8IYM9 498 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 RSRC1Q96IZ7 334 aaKnown RBP6.14□□□□□ -1.43
PTPRD-213ENST00000537002 CHMLP26374 656 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 HLTFQ14527 1009 aaKnown RBP eCLIP6.14□□□□□ -1.43
PTPRD-213ENST00000537002 APLFQ8IW19 511 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-213ENST00000537002 ANKRD62A6NC57 917 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 CDKL5O76039 1030 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 DRP2Q13474 957 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 PLCB4Q15147 1175 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 P3H4Q92791 437 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 FAM210AQ96ND0 272 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 PAIP2Q9BPZ3 127 aaKnown RBP6.14□□□□□ -1.43
PTPRD-213ENST00000537002 CCDC8Q9H0W5 538 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-213ENST00000537002 PNPLA6Q8IY17 1366 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 C21orf2O43822 256 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 IMMTQ16891 758 aaKnown RBP6.14□□□□□ -1.43
PTPRD-213ENST00000537002 FAM173BQ6P4H8 233 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 PRAM1Q96QH2 718 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 MEIS3Q99687 375 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 TRIM35Q9UPQ4 493 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 OPA1O60313 960 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 CEP85Q6P2H3 762 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 LLPHQ9BRT6 129 aaKnown RBP6.13□□□□□ -1.43
PTPRD-213ENST00000537002 CTAGE9A4FU28 777 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 SRRM3A6NNA2 597 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-213ENST00000537002 EIF3CLB5ME19 914 aaKnown RBP6.13□□□□□ -1.43
PTPRD-213ENST00000537002 IKBKBO14920 756 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 PAFAH1B1P43034 410 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 CCDC93Q567U6 631 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 ZFYVE27Q5T4F4 411 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 EHBP1Q8NDI1 1231 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 PLEKHF1Q96S99 279 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 EIF3CQ99613 913 aaKnown RBP6.13□□□□□ -1.43
PTPRD-213ENST00000537002 CARD10Q9BWT7 1032 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 LRRC2Q9BYS8 371 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 LUC7LQ9NQ29 371 aaKnown RBP6.13□□□□□ -1.43
PTPRD-213ENST00000537002 BRF1Q92994 677 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 FAM83GA6ND36 823 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 NSFL1CQ9UNZ2 370 aaKnown RBP6.13□□□□□ -1.43
PTPRD-213ENST00000537002 MTMR6Q9Y217 621 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 CHUKO15111 745 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 WDHD1O75717 1129 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-213ENST00000537002 FAM160A1Q05DH4 1040 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 NBPF3Q9H094 633 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 CPSF2Q9P2I0 782 aaKnown RBP6.13□□□□□ -1.43
PTPRD-213ENST00000537002 PLA2G4AP47712 749 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 LIG3P49916 1009 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 CCDC38Q502W7 563 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 CDK5RAP3Q96JB5 506 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 CABS1Q96KC9 395 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 ALS2CR12Q96Q35 445 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 BATF3Q9NR55 127 aa6.13□□□□□ -1.43
PTPRD-213ENST00000537002 FRMD3A2A2Y4 597 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 NUTM2BA6NNL0 878 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-213ENST00000537002 NUTM2EB1AL46 878 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-213ENST00000537002 SH3BGRP55822 239 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-213ENST00000537002 CHMP4BP1P59074 171 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 PPARDQ03181 441 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 CKAP4Q07065 602 aaKnown RBP6.12□□□□□ -1.43
PTPRD-213ENST00000537002 NUTM2AQ8IVF1 878 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-213ENST00000537002 VEZTQ9HBM0 779 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 SEPT11Q9NVA2 429 aaKnown RBP6.12□□□□□ -1.43
PTPRD-213ENST00000537002 ABCC1P33527 1531 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 APBA1Q02410 837 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 GIGYF2Q6Y7W6 1299 aaKnown RBP6.12□□□□□ -1.43
PTPRD-213ENST00000537002 ARMC9Q7Z3E5 817 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 SLC8A1P32418 973 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 TTC21AQ8NDW8 1320 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 USP5P45974 858 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 SEPT7Q16181 437 aaKnown RBP6.12□□□□□ -1.43
PTPRD-213ENST00000537002 E2F4Q16254 413 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 NAA16Q6N069 864 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-213ENST00000537002 BRAPQ7Z569 592 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 PLEKHA4Q9H4M7 779 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 NRBP1Q9UHY1 535 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 KIF1BO60333 1816 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 SYCP2Q9BX26 1530 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 A0A1W2PQ27 194 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 A0A1W2PQ64 194 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 A0A1W2PQD8 194 aa6.12□□□□□ -1.43
PTPRD-213ENST00000537002 GOLGA8BA8MQT2 603 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms