RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 BCAMP50895 628 aa17.81■□□□□ 0.44
UBE3B-206ENST00000536398 TLL2Q9Y6L7 1015 aa17.81■□□□□ 0.44
UBE3B-206ENST00000536398 WNT10BO00744 389 aa17.8■□□□□ 0.44
UBE3B-206ENST00000536398 PUM3Q15397 648 aaKnown RBP17.8■□□□□ 0.44
UBE3B-206ENST00000536398 SULF1Q8IWU6 871 aa17.8■□□□□ 0.44
UBE3B-206ENST00000536398 HDAC5Q9UQL6 1122 aa17.8■□□□□ 0.44
UBE3B-206ENST00000536398 FAM205AQ6ZU69 1335 aa17.79■□□□□ 0.44
UBE3B-206ENST00000536398 SRGAP3O43295 1099 aa17.79■□□□□ 0.44
UBE3B-206ENST00000536398 CIAO1O76071 339 aa17.79■□□□□ 0.44
UBE3B-206ENST00000536398 GRM1Q13255 1194 aa17.79■□□□□ 0.44
UBE3B-206ENST00000536398 PRAMEF18Q5VWM3 479 aa17.79■□□□□ 0.44
UBE3B-206ENST00000536398 CYP4F22Q6NT55 531 aa17.79■□□□□ 0.44
UBE3B-206ENST00000536398 SAPCD2Q86UD0 394 aa17.79■□□□□ 0.44
UBE3B-206ENST00000536398 DZIP1LQ8IYY4 767 aaKnown RBP17.79■□□□□ 0.44
UBE3B-206ENST00000536398 ZBED3Q96IU2 234 aaPredicted RBP17.79■□□□□ 0.44
UBE3B-206ENST00000536398 COPRSQ9NQ92 184 aa17.79■□□□□ 0.44
UBE3B-206ENST00000536398 TRPM7Q96QT4 1865 aa17.79■□□□□ 0.44
UBE3B-206ENST00000536398 AOX1Q06278 1338 aa17.78■□□□□ 0.44
UBE3B-206ENST00000536398 GNAI2P04899 355 aa17.78■□□□□ 0.44
UBE3B-206ENST00000536398 FKBP1AP62942 108 aaKnown RBP17.78■□□□□ 0.44
UBE3B-206ENST00000536398 CHAF1AQ13111 956 aaPredicted RBP17.78■□□□□ 0.44
UBE3B-206ENST00000536398 GRIK5Q16478 980 aa17.78■□□□□ 0.44
UBE3B-206ENST00000536398 CAVIN4Q5BKX8 364 aa17.78■□□□□ 0.44
UBE3B-206ENST00000536398 PAXIP1Q6ZW49 1069 aaPredicted RBP17.78■□□□□ 0.44
UBE3B-206ENST00000536398 VPS37DQ86XT2 251 aa17.78■□□□□ 0.44
UBE3B-206ENST00000536398 CDCA5Q96FF9 252 aa17.78■□□□□ 0.44
UBE3B-206ENST00000536398 HDAC9Q9UKV0 1011 aa17.78■□□□□ 0.44
UBE3B-206ENST00000536398 WDR33Q9C0J8 1336 aaKnown RBP17.77■□□□□ 0.44
UBE3B-206ENST00000536398 PNMA6EA0A0J9YXQ4 647 aa17.77■□□□□ 0.44
UBE3B-206ENST00000536398 IFIT1P09914 478 aaKnown RBP17.77■□□□□ 0.44
UBE3B-206ENST00000536398 HSPA1AP0DMV8 641 aaKnown RBP17.77■□□□□ 0.44
UBE3B-206ENST00000536398 HSPA1BP0DMV9 641 aaKnown RBP17.77■□□□□ 0.44
UBE3B-206ENST00000536398 MTX1Q13505 466 aa17.77■□□□□ 0.44
UBE3B-206ENST00000536398 MFSD14BQ5SR56 506 aa17.77■□□□□ 0.44
UBE3B-206ENST00000536398 FTSJ3Q8IY81 847 aaKnown RBP17.77■□□□□ 0.44
UBE3B-206ENST00000536398 PANK1Q8TE04 598 aa17.77■□□□□ 0.44
UBE3B-206ENST00000536398 LPIN2Q92539 896 aa17.77■□□□□ 0.44
UBE3B-206ENST00000536398 CAPNS2Q96L46 248 aa17.77■□□□□ 0.44
UBE3B-206ENST00000536398 C1orf115Q9H7X2 142 aa17.77■□□□□ 0.44
UBE3B-206ENST00000536398 CEP126Q9P2H0 1117 aa17.77■□□□□ 0.44
UBE3B-206ENST00000536398 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.77■□□□□ 0.44
UBE3B-206ENST00000536398 SLC5A1P13866 664 aa17.76■□□□□ 0.43
UBE3B-206ENST00000536398 IL15P40933 162 aaPredicted RBP17.76■□□□□ 0.43
UBE3B-206ENST00000536398 DLGAP5Q15398 846 aa17.76■□□□□ 0.43
UBE3B-206ENST00000536398 CFAP100Q494V2 611 aa17.76■□□□□ 0.43
UBE3B-206ENST00000536398 ITPRIPQ8IWB1 547 aa17.76■□□□□ 0.43
UBE3B-206ENST00000536398 FBXO3Q9UK99 471 aa17.76■□□□□ 0.43
UBE3B-206ENST00000536398 PITPNM2Q9BZ72 1349 aa17.75■□□□□ 0.43
UBE3B-206ENST00000536398 ZBTB7BO15156 539 aaPredicted RBP17.75■□□□□ 0.43
UBE3B-206ENST00000536398 FRAT2O75474 233 aaPredicted RBP17.75■□□□□ 0.43
UBE3B-206ENST00000536398 MMP14P50281 582 aa17.75■□□□□ 0.43
UBE3B-206ENST00000536398 ATP2B3Q16720 1220 aa17.75■□□□□ 0.43
UBE3B-206ENST00000536398 PRMT6Q96LA8 375 aaPredicted RBP17.75■□□□□ 0.43
UBE3B-206ENST00000536398 GBA2Q9HCG7 927 aaPredicted RBP17.75■□□□□ 0.43
UBE3B-206ENST00000536398 AOC2O75106 756 aa17.74■□□□□ 0.43
UBE3B-206ENST00000536398 ADORA1P30542 326 aa17.74■□□□□ 0.43
UBE3B-206ENST00000536398 HUNKP57058 714 aa17.74■□□□□ 0.43
UBE3B-206ENST00000536398 MTMR14Q8NCE2 650 aa17.74■□□□□ 0.43
UBE3B-206ENST00000536398 TTF2Q9UNY4 1162 aaKnown RBP17.74■□□□□ 0.43
UBE3B-206ENST00000536398 CLRN2A0PK11 232 aa17.73■□□□□ 0.43
UBE3B-206ENST00000536398 TIMM10P62072 90 aa17.73■□□□□ 0.43
UBE3B-206ENST00000536398 TFCP2Q12800 502 aa17.73■□□□□ 0.43
UBE3B-206ENST00000536398 MOB2Q70IA6 237 aa17.73■□□□□ 0.43
UBE3B-206ENST00000536398 C2orf69Q8N8R5 385 aa17.73■□□□□ 0.43
UBE3B-206ENST00000536398 SPDYE2BA6NHP3 402 aa17.72■□□□□ 0.43
UBE3B-206ENST00000536398 SPDYE6P0CI01 402 aa17.72■□□□□ 0.43
UBE3B-206ENST00000536398 RBM5P52756 815 aaKnown RBP eCLIP17.72■□□□□ 0.43
UBE3B-206ENST00000536398 ZIC5Q96T25 663 aa17.72■□□□□ 0.43
UBE3B-206ENST00000536398 COL1A1P02452 1464 aaPredicted RBP17.71■□□□□ 0.43
UBE3B-206ENST00000536398 ECE1P42892 770 aa17.71■□□□□ 0.43
UBE3B-206ENST00000536398 PHKA1P46020 1223 aa17.71■□□□□ 0.43
UBE3B-206ENST00000536398 ATP8B2P98198 1209 aa17.71■□□□□ 0.43
UBE3B-206ENST00000536398 WBP1LQ9NX94 342 aa17.71■□□□□ 0.43
UBE3B-206ENST00000536398 RCAN3Q9UKA8 241 aa17.71■□□□□ 0.43
UBE3B-206ENST00000536398 FOXN1O15353 648 aa17.7■□□□□ 0.42
UBE3B-206ENST00000536398 CRKP46108 304 aa17.7■□□□□ 0.42
UBE3B-206ENST00000536398 POLA2Q14181 598 aa17.7■□□□□ 0.42
UBE3B-206ENST00000536398 APOBEC3FQ8IUX4 373 aaKnown RBP17.7■□□□□ 0.42
UBE3B-206ENST00000536398 HHIPL1Q96JK4 782 aa17.7■□□□□ 0.42
UBE3B-206ENST00000536398 FAM155AB1AL88 458 aaPredicted RBP17.69■□□□□ 0.42
UBE3B-206ENST00000536398 UBE2Q2LH0YL09 131 aa17.69■□□□□ 0.42
UBE3B-206ENST00000536398 RGMBQ6NW40 437 aa17.69■□□□□ 0.42
UBE3B-206ENST00000536398 SSH3Q8TE77 659 aa17.69■□□□□ 0.42
UBE3B-206ENST00000536398 TBC1D22AQ8WUA7 517 aa17.69■□□□□ 0.42
UBE3B-206ENST00000536398 DEFB129Q9H1M3 183 aa17.69■□□□□ 0.42
UBE3B-206ENST00000536398 TDRD3Q9H7E2 651 aaKnown RBP17.69■□□□□ 0.42
UBE3B-206ENST00000536398 VEZTQ9HBM0 779 aa17.69■□□□□ 0.42
UBE3B-206ENST00000536398 SERPINA10Q9UK55 444 aa17.69■□□□□ 0.42
UBE3B-206ENST00000536398 A0A1B0GUL7 405 aa17.68■□□□□ 0.42
UBE3B-206ENST00000536398 G3BP1Q13283 466 aaKnown RBP eCLIP17.68■□□□□ 0.42
UBE3B-206ENST00000536398 PRKG1Q13976 671 aa17.68■□□□□ 0.42
UBE3B-206ENST00000536398 COL13A1Q5TAT6 717 aaPredicted RBP17.68■□□□□ 0.42
UBE3B-206ENST00000536398 CCDC102BQ68D86 513 aa17.68■□□□□ 0.42
UBE3B-206ENST00000536398 XAGE2Q96GT9 111 aa17.68■□□□□ 0.42
UBE3B-206ENST00000536398 ZNF70Q9UC06 446 aaPredicted RBP17.68■□□□□ 0.42
UBE3B-206ENST00000536398 FZD1Q9UP38 647 aa17.68■□□□□ 0.42
UBE3B-206ENST00000536398 ZNF157P51786 506 aaPredicted RBP17.67■□□□□ 0.42
UBE3B-206ENST00000536398 SPDYE2Q495Y8 402 aa17.67■□□□□ 0.42
UBE3B-206ENST00000536398 NEUROD6Q96NK8 337 aa17.67■□□□□ 0.42
UBE3B-206ENST00000536398 COG6Q9Y2V7 657 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms