RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 OFD1O75665 1012 aa6.91□□□□□ -1.3
VPS33A-203ENST00000536212 CCNYL3P0C7X3 344 aa6.91□□□□□ -1.3
VPS33A-203ENST00000536212 UBTFL1P0CB47 393 aaPredicted RBP6.91□□□□□ -1.3
VPS33A-203ENST00000536212 CTHP32929 405 aa6.91□□□□□ -1.3
VPS33A-203ENST00000536212 MCM5P33992 734 aa6.91□□□□□ -1.3
VPS33A-203ENST00000536212 EIF4A1P60842 406 aaKnown RBP6.91□□□□□ -1.3
VPS33A-203ENST00000536212 NR1H3Q13133 447 aa6.91□□□□□ -1.3
VPS33A-203ENST00000536212 MTX1Q13505 466 aa6.91□□□□□ -1.3
VPS33A-203ENST00000536212 UNC5CLQ8IV45 518 aa6.91□□□□□ -1.3
VPS33A-203ENST00000536212 CCDC24Q8N4L8 307 aa6.91□□□□□ -1.3
VPS33A-203ENST00000536212 PI4K2BQ8TCG2 481 aa6.91□□□□□ -1.3
VPS33A-203ENST00000536212 RHPN1Q8TCX5 695 aa6.91□□□□□ -1.3
VPS33A-203ENST00000536212 KIF1BPQ96EK5 621 aa6.91□□□□□ -1.3
VPS33A-203ENST00000536212 TTC14Q96N46 770 aa6.91□□□□□ -1.3
VPS33A-203ENST00000536212 MAP10Q9P2G4 905 aa6.91□□□□□ -1.3
VPS33A-203ENST00000536212 NOL7Q9UMY1 257 aaKnown RBP6.91□□□□□ -1.3
VPS33A-203ENST00000536212 WASF2Q9Y6W5 498 aa6.91□□□□□ -1.3
VPS33A-203ENST00000536212 KIF13AQ9H1H9 1805 aa6.91□□□□□ -1.3
VPS33A-203ENST00000536212 ADGRL3Q9HAR2 1447 aa6.91□□□□□ -1.3
VPS33A-203ENST00000536212 ZBBXA8MT70 800 aa6.9□□□□□ -1.3
VPS33A-203ENST00000536212 SGSM2O43147 1006 aa6.9□□□□□ -1.3
VPS33A-203ENST00000536212 RRP9O43818 475 aaKnown RBP6.9□□□□□ -1.3
VPS33A-203ENST00000536212 NCLP19338 710 aaKnown RBP6.9□□□□□ -1.3
VPS33A-203ENST00000536212 BRD2P25440 801 aaKnown RBP6.9□□□□□ -1.3
VPS33A-203ENST00000536212 HSP90AB4PQ58FF6 505 aa6.9□□□□□ -1.3
VPS33A-203ENST00000536212 BEND3Q5T5X7 828 aa6.9□□□□□ -1.3
VPS33A-203ENST00000536212 TSHZ3Q63HK5 1081 aa6.9□□□□□ -1.3
VPS33A-203ENST00000536212 THEMISQ8N1K5 641 aaPredicted RBP6.9□□□□□ -1.3
VPS33A-203ENST00000536212 TMEM151AQ8N4L1 468 aa6.9□□□□□ -1.3
VPS33A-203ENST00000536212 IP6K1Q92551 441 aa6.9□□□□□ -1.3
VPS33A-203ENST00000536212 KCNB2Q92953 911 aa6.9□□□□□ -1.3
VPS33A-203ENST00000536212 PPP1R12CQ9BZL4 782 aa6.9□□□□□ -1.3
VPS33A-203ENST00000536212 LSG1Q9H089 658 aaKnown RBP6.9□□□□□ -1.3
VPS33A-203ENST00000536212 ANO2Q9NQ90 1003 aa6.9□□□□□ -1.3
VPS33A-203ENST00000536212 NSFL1CQ9UNZ2 370 aaKnown RBP6.9□□□□□ -1.3
VPS33A-203ENST00000536212 RAD50Q92878 1312 aa6.9□□□□□ -1.3
VPS33A-203ENST00000536212 NCAPD2Q15021 1401 aa6.9□□□□□ -1.31
VPS33A-203ENST00000536212 PATL2C9JE40 543 aaKnown RBP6.89□□□□□ -1.31
VPS33A-203ENST00000536212 FBXO45P0C2W1 286 aa6.89□□□□□ -1.31
VPS33A-203ENST00000536212 UVSSAQ2YD98 709 aa6.89□□□□□ -1.31
VPS33A-203ENST00000536212 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.89□□□□□ -1.31
VPS33A-203ENST00000536212 PPP1R42Q7Z4L9 355 aa6.89□□□□□ -1.31
VPS33A-203ENST00000536212 EHBP1Q8NDI1 1231 aa6.89□□□□□ -1.31
VPS33A-203ENST00000536212 DNAAF4Q8WXU2 420 aa6.89□□□□□ -1.31
VPS33A-203ENST00000536212 RILPL2Q969X0 211 aa6.89□□□□□ -1.31
VPS33A-203ENST00000536212 SYAP1Q96A49 352 aaPredicted RBP6.89□□□□□ -1.31
VPS33A-203ENST00000536212 PBXIP1Q96AQ6 731 aa6.89□□□□□ -1.31
VPS33A-203ENST00000536212 NUDT12Q9BQG2 462 aa6.89□□□□□ -1.31
VPS33A-203ENST00000536212 IL25Q9H293 177 aa6.89□□□□□ -1.31
VPS33A-203ENST00000536212 PHAXQ9H814 394 aaKnown RBP6.89□□□□□ -1.31
VPS33A-203ENST00000536212 TTC41PQ6P2S7 1318 aa6.89□□□□□ -1.31
VPS33A-203ENST00000536212 WDR33Q9C0J8 1336 aaKnown RBP6.89□□□□□ -1.31
VPS33A-203ENST00000536212 RPAP1Q9BWH6 1393 aaPredicted RBP6.89□□□□□ -1.31
VPS33A-203ENST00000536212 OVOS2A0A0G2JMS6 1433 aa6.89□□□□□ -1.31
VPS33A-203ENST00000536212 LMTK3Q96Q04 1460 aa6.89□□□□□ -1.31
VPS33A-203ENST00000536212 CRYBG1Q9Y4K1 1723 aa6.89□□□□□ -1.31
VPS33A-203ENST00000536212 CACNA1FO60840 1977 aa6.89□□□□□ -1.31
VPS33A-203ENST00000536212 NFAT5O94916 1531 aa6.88□□□□□ -1.31
VPS33A-203ENST00000536212 HEG1Q9ULI3 1381 aa6.88□□□□□ -1.31
VPS33A-203ENST00000536212 PALM3A6NDB9 673 aaPredicted RBP6.88□□□□□ -1.31
VPS33A-203ENST00000536212 SURF6O75683 361 aaKnown RBP6.88□□□□□ -1.31
VPS33A-203ENST00000536212 ALDH1L1O75891 902 aa6.88□□□□□ -1.31
VPS33A-203ENST00000536212 RFX1P22670 979 aa6.88□□□□□ -1.31
VPS33A-203ENST00000536212 CEBPAP49715 358 aaPredicted RBP6.88□□□□□ -1.31
VPS33A-203ENST00000536212 RASSF7Q02833 373 aa6.88□□□□□ -1.31
VPS33A-203ENST00000536212 KCNH2Q12809 1159 aa6.88□□□□□ -1.31
VPS33A-203ENST00000536212 CNTROBQ8N137 903 aa6.88□□□□□ -1.31
VPS33A-203ENST00000536212 ARMC2Q8NEN0 867 aa6.88□□□□□ -1.31
VPS33A-203ENST00000536212 CHAMP1Q96JM3 812 aa6.88□□□□□ -1.31
VPS33A-203ENST00000536212 UCN2Q96RP3 112 aa6.88□□□□□ -1.31
VPS33A-203ENST00000536212 TM6SF1Q9BZW5 370 aa6.88□□□□□ -1.31
VPS33A-203ENST00000536212 TSPY26PQ9H489 355 aa6.88□□□□□ -1.31
VPS33A-203ENST00000536212 EVA1BQ9NVM1 165 aa6.88□□□□□ -1.31
VPS33A-203ENST00000536212 ZKSCAN5Q9Y2L8 839 aa6.88□□□□□ -1.31
VPS33A-203ENST00000536212 SNX14Q9Y5W7 946 aa6.88□□□□□ -1.31
VPS33A-203ENST00000536212 PHRF1Q9P1Y6 1649 aaKnown RBP6.87□□□□□ -1.31
VPS33A-203ENST00000536212 ADCY9O60503 1353 aa6.87□□□□□ -1.31
VPS33A-203ENST00000536212 UTYO14607 1347 aa6.87□□□□□ -1.31
VPS33A-203ENST00000536212 SYCE3A1L190 88 aa6.87□□□□□ -1.31
VPS33A-203ENST00000536212 GLRX3O76003 335 aaKnown RBP6.87□□□□□ -1.31
VPS33A-203ENST00000536212 GDF11O95390 407 aa6.87□□□□□ -1.31
VPS33A-203ENST00000536212 HMGB1P09429 215 aaKnown RBP6.87□□□□□ -1.31
VPS33A-203ENST00000536212 KCNA6P17658 529 aa6.87□□□□□ -1.31
VPS33A-203ENST00000536212 MSNP26038 577 aaKnown RBP6.87□□□□□ -1.31
VPS33A-203ENST00000536212 AKAP4Q5JQC9 854 aa6.87□□□□□ -1.31
VPS33A-203ENST00000536212 ABTB2Q8N961 1025 aa6.87□□□□□ -1.31
VPS33A-203ENST00000536212 GPKOWQ92917 476 aaPredicted RBP eCLIP6.87□□□□□ -1.31
VPS33A-203ENST00000536212 UPF3BQ9BZI7 483 aaKnown RBP6.87□□□□□ -1.31
VPS33A-203ENST00000536212 IL1RAPL2Q9NP60 686 aa6.87□□□□□ -1.31
VPS33A-203ENST00000536212 CCDC39Q9UFE4 941 aa6.87□□□□□ -1.31
VPS33A-203ENST00000536212 LIMCH1Q9UPQ0 1083 aa6.87□□□□□ -1.31
VPS33A-203ENST00000536212 HDAC5Q9UQL6 1122 aa6.87□□□□□ -1.31
VPS33A-203ENST00000536212 KDM3BQ7LBC6 1761 aa6.87□□□□□ -1.31
VPS33A-203ENST00000536212 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.86□□□□□ -1.31
VPS33A-203ENST00000536212 SRGAP3O43295 1099 aa6.86□□□□□ -1.31
VPS33A-203ENST00000536212 LETM1O95202 739 aaPredicted RBP6.86□□□□□ -1.31
VPS33A-203ENST00000536212 NBPF7P0C2Y1 421 aaPredicted RBP6.86□□□□□ -1.31
VPS33A-203ENST00000536212 ZSCAN22P10073 491 aaPredicted RBP6.86□□□□□ -1.31
VPS33A-203ENST00000536212 AK2P54819 239 aa6.86□□□□□ -1.31
VPS33A-203ENST00000536212 PLEKHO1Q53GL0 409 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms