RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 DLGAP5Q15398 846 aa26.08■■□□□ 1.77
LTBR-205ENST00000535739 SRCIN1Q9C0H9 1055 aa26.08■■□□□ 1.77
LTBR-205ENST00000535739 CNNM1Q9NRU3 951 aa26.08■■□□□ 1.77
LTBR-205ENST00000535739 PCDHAC2Q9Y5I4 1007 aa26.08■■□□□ 1.77
LTBR-205ENST00000535739 F8W031 263 aaPredicted RBP26.07■■□□□ 1.76
LTBR-205ENST00000535739 JAG2Q9Y219 1238 aa26.07■■□□□ 1.76
LTBR-205ENST00000535739 PTPN12Q05209 780 aaKnown RBP26.06■■□□□ 1.76
LTBR-205ENST00000535739 MKRN3Q13064 507 aaKnown RBP26.06■■□□□ 1.76
LTBR-205ENST00000535739 SUCLG2Q96I99 432 aa26.06■■□□□ 1.76
LTBR-205ENST00000535739 MLLT1Q03111 559 aaPredicted RBP26.05■■□□□ 1.76
LTBR-205ENST00000535739 ARMC9Q7Z3E5 817 aa26.05■■□□□ 1.76
LTBR-205ENST00000535739 MTMR14Q8NCE2 650 aa26.05■■□□□ 1.76
LTBR-205ENST00000535739 ZNF521Q96K83 1311 aa26.05■■□□□ 1.76
LTBR-205ENST00000535739 KAZALD1Q96I82 304 aa26.04■■□□□ 1.76
LTBR-205ENST00000535739 DEFB129Q9H1M3 183 aa26.04■■□□□ 1.76
LTBR-205ENST00000535739 FZD1Q9UP38 647 aa26.04■■□□□ 1.76
LTBR-205ENST00000535739 NBPF7P0C2Y1 421 aaPredicted RBP26.03■■□□□ 1.76
LTBR-205ENST00000535739 FKBP1AP62942 108 aaKnown RBP26.03■■□□□ 1.76
LTBR-205ENST00000535739 CFAP100Q494V2 611 aa26.03■■□□□ 1.76
LTBR-205ENST00000535739 PUS3Q9BZE2 481 aaKnown RBP26.03■■□□□ 1.76
LTBR-205ENST00000535739 ANGEL1Q9UNK9 670 aaKnown RBP26.03■■□□□ 1.76
LTBR-205ENST00000535739 TBC1D8O95759 1140 aa26.02■■□□□ 1.76
LTBR-205ENST00000535739 COL1A1P02452 1464 aaPredicted RBP26.02■■□□□ 1.76
LTBR-205ENST00000535739 CLRN2A0PK11 232 aa26.01■■□□□ 1.75
LTBR-205ENST00000535739 TM4SF4P48230 202 aa26.01■■□□□ 1.75
LTBR-205ENST00000535739 AOX1Q06278 1338 aa26.01■■□□□ 1.75
LTBR-205ENST00000535739 LDLRAD1Q5T700 205 aa26.01■■□□□ 1.75
LTBR-205ENST00000535739 PRMT6Q96LA8 375 aaPredicted RBP26.01■■□□□ 1.75
LTBR-205ENST00000535739 TNRC18O15417 2968 aaPredicted RBP26■■□□□ 1.75
LTBR-205ENST00000535739 SPDYE2BA6NHP3 402 aa26■■□□□ 1.75
LTBR-205ENST00000535739 SPDYE6P0CI01 402 aa26■■□□□ 1.75
LTBR-205ENST00000535739 CTU1Q7Z7A3 348 aaKnown RBP26■■□□□ 1.75
LTBR-205ENST00000535739 MRPL50Q8N5N7 158 aaKnown RBP26■■□□□ 1.75
LTBR-205ENST00000535739 UTYO14607 1347 aa25.99■■□□□ 1.75
LTBR-205ENST00000535739 MYO1BO43795 1136 aa25.99■■□□□ 1.75
LTBR-205ENST00000535739 GYG1P46976 350 aa25.99■■□□□ 1.75
LTBR-205ENST00000535739 UBE4AQ14139 1066 aa25.99■■□□□ 1.75
LTBR-205ENST00000535739 FAM205AQ6ZU69 1335 aa25.98■■□□□ 1.75
LTBR-205ENST00000535739 RBM5P52756 815 aaKnown RBP eCLIP25.98■■□□□ 1.753e-10■■■■■ 45.8
LTBR-205ENST00000535739 TDRD7Q8NHU6 1098 aaKnown RBP25.98■■□□□ 1.75
LTBR-205ENST00000535739 BICC1Q9H694 974 aaKnown RBP25.98■■□□□ 1.75
LTBR-205ENST00000535739 VEZTQ9HBM0 779 aa25.98■■□□□ 1.75
LTBR-205ENST00000535739 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.98■■□□□ 1.75
LTBR-205ENST00000535739 RIPOR2Q9Y4F9 1068 aa25.98■■□□□ 1.75
LTBR-205ENST00000535739 SSC5DA1L4H1 1573 aa25.98■■□□□ 1.75
LTBR-205ENST00000535739 HIBADHP31937 336 aaKnown RBP25.97■■□□□ 1.75
LTBR-205ENST00000535739 SPRYD7Q5W111 196 aa25.97■■□□□ 1.75
LTBR-205ENST00000535739 ZNF296Q8WUU4 475 aaPredicted RBP25.97■■□□□ 1.75
LTBR-205ENST00000535739 FAM84BQ96KN1 310 aaPredicted RBP25.97■■□□□ 1.75
LTBR-205ENST00000535739 PPP2R3BQ9Y5P8 575 aa25.97■■□□□ 1.75
LTBR-205ENST00000535739 SREBF2Q12772 1141 aa25.96■■□□□ 1.75
LTBR-205ENST00000535739 MFSD14BQ5SR56 506 aa25.96■■□□□ 1.75
LTBR-205ENST00000535739 ARAP2Q8WZ64 1704 aa25.95■■□□□ 1.74
LTBR-205ENST00000535739 MAP3K11Q16584 847 aa25.95■■□□□ 1.74
LTBR-205ENST00000535739 RABL6Q3YEC7 729 aaPredicted RBP25.95■■□□□ 1.74
LTBR-205ENST00000535739 ANKRD44Q8N8A2 993 aa25.95■■□□□ 1.74
LTBR-205ENST00000535739 SLC10A4Q96EP9 437 aa25.95■■□□□ 1.74
LTBR-205ENST00000535739 CLMNQ96JQ2 1002 aa25.95■■□□□ 1.74
LTBR-205ENST00000535739 MROH5Q6ZUA9 1318 aa25.94■■□□□ 1.74
LTBR-205ENST00000535739 PPP1R12BO60237 982 aaPredicted RBP25.94■■□□□ 1.74
LTBR-205ENST00000535739 LRRC24Q50LG9 513 aa25.94■■□□□ 1.74
LTBR-205ENST00000535739 NBPF12Q5TAG4 269 aaPredicted RBP25.94■■□□□ 1.74
LTBR-205ENST00000535739 TTF2Q9UNY4 1162 aaKnown RBP25.94■■□□□ 1.74
LTBR-205ENST00000535739 GPR25O00155 361 aa25.93■■□□□ 1.74
LTBR-205ENST00000535739 SOX10P56693 466 aa25.93■■□□□ 1.74
LTBR-205ENST00000535739 SUPT20HL1Q3ZLR7 823 aa25.93■■□□□ 1.74
LTBR-205ENST00000535739 SSH1Q8WYL5 1049 aa25.93■■□□□ 1.74
LTBR-205ENST00000535739 R3HDMLQ9H3Y0 253 aa25.93■■□□□ 1.74
LTBR-205ENST00000535739 PTPRCP08575 1304 aa25.92■■□□□ 1.74
LTBR-205ENST00000535739 E9PSI1 815 aa25.92■■□□□ 1.74
LTBR-205ENST00000535739 RASA3Q14644 834 aa25.92■■□□□ 1.74
LTBR-205ENST00000535739 IQSEC3Q9UPP2 1182 aaPredicted RBP25.92■■□□□ 1.74
LTBR-205ENST00000535739 METTL24Q5JXM2 366 aa25.91■■□□□ 1.74
LTBR-205ENST00000535739 WNK4Q96J92 1243 aa25.91■■□□□ 1.74
LTBR-205ENST00000535739 ZNF70Q9UC06 446 aaPredicted RBP25.91■■□□□ 1.74
LTBR-205ENST00000535739 SERPINA10Q9UK55 444 aa25.91■■□□□ 1.74
LTBR-205ENST00000535739 LAMB1P07942 1786 aa25.9■■□□□ 1.74
LTBR-205ENST00000535739 PDE4DIPQ5VU43 2346 aa25.9■■□□□ 1.74
LTBR-205ENST00000535739 SPDYE2Q495Y8 402 aa25.9■■□□□ 1.74
LTBR-205ENST00000535739 FBXO33Q7Z6M2 555 aa25.9■■□□□ 1.74
LTBR-205ENST00000535739 VPS37DQ86XT2 251 aa25.9■■□□□ 1.74
LTBR-205ENST00000535739 KLHDC4Q8TBB5 520 aa25.9■■□□□ 1.74
LTBR-205ENST00000535739 TDRD3Q9H7E2 651 aaKnown RBP25.9■■□□□ 1.74
LTBR-205ENST00000535739 USP2O75604 605 aaPredicted RBP25.89■■□□□ 1.74
LTBR-205ENST00000535739 SLFN5Q08AF3 891 aa25.89■■□□□ 1.74
LTBR-205ENST00000535739 GRIK5Q16478 980 aa25.89■■□□□ 1.74
LTBR-205ENST00000535739 NOM1Q5C9Z4 860 aaKnown RBP25.89■■□□□ 1.74
LTBR-205ENST00000535739 CFHR5Q9BXR6 569 aa25.89■■□□□ 1.74
LTBR-205ENST00000535739 USP44Q9H0E7 712 aa25.89■■□□□ 1.74
LTBR-205ENST00000535739 HPS5Q9UPZ3 1129 aa25.89■■□□□ 1.74
LTBR-205ENST00000535739 OTOFQ9HC10 1997 aa25.89■■□□□ 1.73
LTBR-205ENST00000535739 MANSC4A6NHS7 340 aaPredicted RBP25.88■■□□□ 1.73
LTBR-205ENST00000535739 CHAF1AQ13111 956 aaPredicted RBP25.88■■□□□ 1.73
LTBR-205ENST00000535739 PKN2Q16513 984 aaKnown RBP25.88■■□□□ 1.73
LTBR-205ENST00000535739 DZIP1LQ8IYY4 767 aaKnown RBP25.88■■□□□ 1.73
LTBR-205ENST00000535739 VGLL2Q8N8G2 317 aa25.88■■□□□ 1.73
LTBR-205ENST00000535739 FKTNO75072 461 aa25.87■■□□□ 1.73
LTBR-205ENST00000535739 PDE8BO95263 885 aa25.87■■□□□ 1.73
LTBR-205ENST00000535739 ZBTB48P10074 688 aaPredicted RBP25.87■■□□□ 1.73
LTBR-205ENST00000535739 CRKP46108 304 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms