RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 KRT9P35527 623 aa14.31□□□□□ -0.12
SPG11-203ENST00000535302 PPP1R21Q6ZMI0 780 aa14.31□□□□□ -0.12
SPG11-203ENST00000535302 KSR1Q8IVT5 923 aa14.31□□□□□ -0.12
SPG11-203ENST00000535302 ZGPATQ8N5A5 531 aaKnown RBP14.31□□□□□ -0.12
SPG11-203ENST00000535302 AK2P54819 239 aa14.31□□□□□ -0.12
SPG11-203ENST00000535302 PHACTR3Q96KR7 559 aa14.31□□□□□ -0.12
SPG11-203ENST00000535302 LMOD1P29536 600 aaPredicted RBP14.31□□□□□ -0.12
SPG11-203ENST00000535302 GEN1Q17RS7 908 aa14.31□□□□□ -0.12
SPG11-203ENST00000535302 ERMNQ8TAM6 284 aa14.31□□□□□ -0.12
SPG11-203ENST00000535302 GJA3Q9Y6H8 435 aa14.31□□□□□ -0.12
SPG11-203ENST00000535302 NBPF7P0C2Y1 421 aaPredicted RBP14.3□□□□□ -0.12
SPG11-203ENST00000535302 KANK3Q6NY19 840 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 CCDC186Q7Z3E2 898 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 TTC21AQ8NDW8 1320 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 MAEAQ7L5Y9 396 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 ZSCAN16Q9H4T2 348 aaPredicted RBP14.3□□□□□ -0.12
SPG11-203ENST00000535302 ZNF608Q9ULD9 1512 aaPredicted RBP14.3□□□□□ -0.12
SPG11-203ENST00000535302 NSD2O96028 1365 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 IL2RBP14784 551 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 SEPT14Q6ZU15 432 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 PPP1R9BQ96SB3 815 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 DNAI1Q9UI46 699 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 ABCA10Q8WWZ4 1543 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 SMC1BQ8NDV3 1235 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 PFDN4Q9NQP4 134 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 POLKQ9UBT6 870 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 NDUFB9Q9Y6M9 179 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 MRPS27Q92552 414 aaKnown RBP14.3□□□□□ -0.12
SPG11-203ENST00000535302 PARP3Q9Y6F1 533 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 KDM5BQ9UGL1 1544 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 RTL1A6NKG5 1358 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 RNF113AO15541 343 aaKnown RBP14.3□□□□□ -0.12
SPG11-203ENST00000535302 RHOXF2BP0C7M4 288 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 IL15P40933 162 aaPredicted RBP14.3□□□□□ -0.12
SPG11-203ENST00000535302 RAB3GAP1Q15042 981 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 ZYXQ15942 572 aaKnown RBP14.3□□□□□ -0.12
SPG11-203ENST00000535302 RHOXF2Q9BQY4 288 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 ZNF408Q9H9D4 720 aa14.3□□□□□ -0.12
SPG11-203ENST00000535302 F13A1P00488 732 aa14.29□□□□□ -0.12
SPG11-203ENST00000535302 MICALL1Q8N3F8 863 aa14.29□□□□□ -0.12
SPG11-203ENST00000535302 ANKRD44Q8N8A2 993 aa14.29□□□□□ -0.12
SPG11-203ENST00000535302 DDX17Q92841 729 aaKnown RBP14.29□□□□□ -0.12
SPG11-203ENST00000535302 RMND1Q9NWS8 449 aa14.29□□□□□ -0.12
SPG11-203ENST00000535302 PSMD6Q15008 389 aa14.29□□□□□ -0.12
SPG11-203ENST00000535302 CFAP57Q96MR6 1250 aa14.29□□□□□ -0.12
SPG11-203ENST00000535302 CNNM2Q9H8M5 875 aa14.29□□□□□ -0.12
SPG11-203ENST00000535302 GPCPD1Q9NPB8 672 aa14.29□□□□□ -0.12
SPG11-203ENST00000535302 GNPATO15228 680 aa14.29□□□□□ -0.12
SPG11-203ENST00000535302 RRP36Q96EU6 259 aaKnown RBP14.29□□□□□ -0.12
SPG11-203ENST00000535302 FAM89AQ96GI7 184 aa14.29□□□□□ -0.12
SPG11-203ENST00000535302 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.29□□□□□ -0.12
SPG11-203ENST00000535302 SKILP12757 684 aa14.29□□□□□ -0.12
SPG11-203ENST00000535302 ZNF594Q96JF6 807 aaPredicted RBP14.29□□□□□ -0.12
SPG11-203ENST00000535302 RTCBQ9Y3I0 505 aaKnown RBP14.29□□□□□ -0.12
SPG11-203ENST00000535302 CHMP2AO43633 222 aa14.29□□□□□ -0.12
SPG11-203ENST00000535302 CKAP4Q07065 602 aaKnown RBP14.29□□□□□ -0.12
SPG11-203ENST00000535302 CREB3L3Q68CJ9 461 aa14.29□□□□□ -0.12
SPG11-203ENST00000535302 MSL1Q68DK7 614 aa14.29□□□□□ -0.12
SPG11-203ENST00000535302 KRT2P35908 639 aa14.28□□□□□ -0.12
SPG11-203ENST00000535302 PRKG1Q13976 671 aa14.28□□□□□ -0.12
SPG11-203ENST00000535302 HAUS7Q99871 368 aa14.28□□□□□ -0.12
SPG11-203ENST00000535302 CSPG5O95196 566 aa14.28□□□□□ -0.12
SPG11-203ENST00000535302 KRT5P13647 590 aa14.28□□□□□ -0.12
SPG11-203ENST00000535302 HDAC1Q13547 482 aaPredicted RBP14.28□□□□□ -0.12
SPG11-203ENST00000535302 FAM13AO94988 1023 aa14.28□□□□□ -0.12
SPG11-203ENST00000535302 DCAF17Q5H9S7 520 aaPredicted RBP14.28□□□□□ -0.12
SPG11-203ENST00000535302 CEP85Q6P2H3 762 aa14.28□□□□□ -0.12
SPG11-203ENST00000535302 G2E3Q7L622 706 aa14.28□□□□□ -0.12
SPG11-203ENST00000535302 ZNF174Q15697 407 aa14.28□□□□□ -0.12
SPG11-203ENST00000535302 FNBP4Q8N3X1 1017 aaPredicted RBP14.28□□□□□ -0.12
SPG11-203ENST00000535302 LZTFL1Q9NQ48 299 aa14.28□□□□□ -0.12
SPG11-203ENST00000535302 GINS2Q9Y248 185 aa14.28□□□□□ -0.12
SPG11-203ENST00000535302 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.28□□□□□ -0.12
SPG11-203ENST00000535302 ZC3H12CQ9C0D7 883 aaKnown RBP14.28□□□□□ -0.12
SPG11-203ENST00000535302 PPANQ9NQ55 473 aaKnown RBP14.28□□□□□ -0.12
SPG11-203ENST00000535302 SYT1P21579 422 aa14.27□□□□□ -0.12
SPG11-203ENST00000535302 BTG4Q9NY30 223 aa14.27□□□□□ -0.12
SPG11-203ENST00000535302 RPRD2Q5VT52 1461 aaKnown RBP14.27□□□□□ -0.12
SPG11-203ENST00000535302 SPDYE3A6NKU9 549 aa14.27□□□□□ -0.12
SPG11-203ENST00000535302 HSPA4P34932 840 aa14.27□□□□□ -0.12
SPG11-203ENST00000535302 GTF2A1P52655 376 aaPredicted RBP14.27□□□□□ -0.12
SPG11-203ENST00000535302 EYA1Q99502 592 aa14.27□□□□□ -0.12
SPG11-203ENST00000535302 CALCOCO1Q9P1Z2 691 aa14.27□□□□□ -0.12
SPG11-203ENST00000535302 IL16Q14005 1332 aa14.27□□□□□ -0.12
SPG11-203ENST00000535302 ZFYP08048 801 aaPredicted RBP14.27□□□□□ -0.13
SPG11-203ENST00000535302 UBXN1Q04323 297 aa14.27□□□□□ -0.13
SPG11-203ENST00000535302 PLEKHA4Q9H4M7 779 aa14.27□□□□□ -0.13
SPG11-203ENST00000535302 TTC12Q9H892 705 aaPredicted RBP14.27□□□□□ -0.13
SPG11-203ENST00000535302 PTPDC1A2A3K4 754 aa14.27□□□□□ -0.13
SPG11-203ENST00000535302 MBD4O95243 580 aa14.27□□□□□ -0.13
SPG11-203ENST00000535302 EPSTI1Q96J88 318 aa14.27□□□□□ -0.13
SPG11-203ENST00000535302 HMGXB3Q12766 1538 aa14.27□□□□□ -0.13
SPG11-203ENST00000535302 KCNG4Q8TDN1 519 aa14.27□□□□□ -0.13
SPG11-203ENST00000535302 C6orf50Q9HD87 102 aa14.27□□□□□ -0.13
SPG11-203ENST00000535302 RIMS2Q9UQ26 1411 aa14.27□□□□□ -0.13
SPG11-203ENST00000535302 KLHL40Q2TBA0 621 aa14.26□□□□□ -0.13
SPG11-203ENST00000535302 SREK1Q8WXA9 508 aaKnown RBP14.26□□□□□ -0.13
SPG11-203ENST00000535302 MPHOSPH6Q99547 160 aaKnown RBP14.26□□□□□ -0.13
SPG11-203ENST00000535302 SPTLC2O15270 562 aa14.26□□□□□ -0.13
SPG11-203ENST00000535302 TIMM10P62072 90 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms