RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 SASH1O94885 1247 aa23.72■■□□□ 1.39
NDUFS3-213ENST00000534716 USP44Q9H0E7 712 aa23.72■■□□□ 1.39
NDUFS3-213ENST00000534716 FAM205AQ6ZU69 1335 aa23.71■■□□□ 1.39
NDUFS3-213ENST00000534716 MROH5Q6ZUA9 1318 aa23.71■■□□□ 1.39
NDUFS3-213ENST00000534716 APOBEC3FQ8IUX4 373 aaKnown RBP23.71■■□□□ 1.39
NDUFS3-213ENST00000534716 PUS3Q9BZE2 481 aaKnown RBP23.71■■□□□ 1.39
NDUFS3-213ENST00000534716 SAGE1Q9NXZ1 904 aa23.71■■□□□ 1.39
NDUFS3-213ENST00000534716 KIF23Q02241 960 aaPredicted RBP23.7■■□□□ 1.38
NDUFS3-213ENST00000534716 REM2Q8IYK8 340 aaPredicted RBP23.7■■□□□ 1.38
NDUFS3-213ENST00000534716 TSKSQ9UJT2 592 aa23.7■■□□□ 1.38
NDUFS3-213ENST00000534716 SCAF8Q9UPN6 1271 aaKnown RBP23.7■■□□□ 1.38
NDUFS3-213ENST00000534716 RASAL3Q86YV0 1011 aa23.69■■□□□ 1.38
NDUFS3-213ENST00000534716 TDRD7Q8NHU6 1098 aaKnown RBP23.69■■□□□ 1.38
NDUFS3-213ENST00000534716 FAM84BQ96KN1 310 aaPredicted RBP23.69■■□□□ 1.38
NDUFS3-213ENST00000534716 COL1A1P02452 1464 aaPredicted RBP23.68■■□□□ 1.38
NDUFS3-213ENST00000534716 NF2P35240 595 aa23.68■■□□□ 1.38
NDUFS3-213ENST00000534716 DLGAP5Q15398 846 aa23.68■■□□□ 1.38
NDUFS3-213ENST00000534716 PRAMEF18Q5VWM3 479 aa23.68■■□□□ 1.38
NDUFS3-213ENST00000534716 SMC4Q9NTJ3 1288 aa23.68■■□□□ 1.38
NDUFS3-213ENST00000534716 HIBADHP31937 336 aaKnown RBP23.67■■□□□ 1.38
NDUFS3-213ENST00000534716 VGLL2Q8N8G2 317 aa23.66■■□□□ 1.38
NDUFS3-213ENST00000534716 CSRNP1Q96S65 589 aa23.66■■□□□ 1.38
NDUFS3-213ENST00000534716 SPDYE2BA6NHP3 402 aa23.65■■□□□ 1.38
NDUFS3-213ENST00000534716 SPDYE6P0CI01 402 aa23.65■■□□□ 1.38
NDUFS3-213ENST00000534716 GYG1P46976 350 aa23.65■■□□□ 1.38
NDUFS3-213ENST00000534716 CFAP100Q494V2 611 aa23.65■■□□□ 1.38
NDUFS3-213ENST00000534716 LRRC24Q50LG9 513 aa23.65■■□□□ 1.38
NDUFS3-213ENST00000534716 MOB2Q70IA6 237 aa23.65■■□□□ 1.38
NDUFS3-213ENST00000534716 ABHD8Q96I13 439 aa23.65■■□□□ 1.38
NDUFS3-213ENST00000534716 PPP2R3BQ9Y5P8 575 aa23.65■■□□□ 1.38
NDUFS3-213ENST00000534716 UBE2Q2LH0YL09 131 aa23.64■■□□□ 1.37
NDUFS3-213ENST00000534716 PDE8BO95263 885 aa23.64■■□□□ 1.37
NDUFS3-213ENST00000534716 FBXO33Q7Z6M2 555 aa23.64■■□□□ 1.37
NDUFS3-213ENST00000534716 DEFB129Q9H1M3 183 aa23.64■■□□□ 1.37
NDUFS3-213ENST00000534716 RNF186Q9NXI6 227 aa23.64■■□□□ 1.37
NDUFS3-213ENST00000534716 MYO1BO43795 1136 aa23.63■■□□□ 1.37
NDUFS3-213ENST00000534716 METTL24Q5JXM2 366 aa23.63■■□□□ 1.37
NDUFS3-213ENST00000534716 PRMT6Q96LA8 375 aaPredicted RBP23.63■■□□□ 1.37
NDUFS3-213ENST00000534716 KIF16BQ96L93 1317 aa23.62■■□□□ 1.37
NDUFS3-213ENST00000534716 F8W031 263 aaPredicted RBP23.62■■□□□ 1.37
NDUFS3-213ENST00000534716 MFSD14BQ5SR56 506 aa23.62■■□□□ 1.37
NDUFS3-213ENST00000534716 SERPINA10Q9UK55 444 aa23.62■■□□□ 1.37
NDUFS3-213ENST00000534716 JAG2Q9Y219 1238 aa23.62■■□□□ 1.37
NDUFS3-213ENST00000534716 RFX5P48382 616 aaPredicted RBP23.61■■□□□ 1.37
NDUFS3-213ENST00000534716 LDLRAD1Q5T700 205 aa23.61■■□□□ 1.37
NDUFS3-213ENST00000534716 ARMC9Q7Z3E5 817 aa23.61■■□□□ 1.37
NDUFS3-213ENST00000534716 NOB1Q9ULX3 412 aaKnown RBP23.61■■□□□ 1.37
NDUFS3-213ENST00000534716 PCDHAC2Q9Y5I4 1007 aa23.61■■□□□ 1.37
NDUFS3-213ENST00000534716 TTLL12Q14166 644 aaPredicted RBP23.6■■□□□ 1.37
NDUFS3-213ENST00000534716 MAP3K11Q16584 847 aa23.6■■□□□ 1.37
NDUFS3-213ENST00000534716 CAVIN4Q5BKX8 364 aa23.6■■□□□ 1.37
NDUFS3-213ENST00000534716 KLHDC4Q8TBB5 520 aa23.6■■□□□ 1.37
NDUFS3-213ENST00000534716 API5Q9BZZ5 524 aaKnown RBP23.6■■□□□ 1.37
NDUFS3-213ENST00000534716 TRPA1O75762 1119 aa23.59■■□□□ 1.37
NDUFS3-213ENST00000534716 FGFR2P21802 821 aa23.59■■□□□ 1.37
NDUFS3-213ENST00000534716 PTPN12Q05209 780 aaKnown RBP23.59■■□□□ 1.37
NDUFS3-213ENST00000534716 VPS37DQ86XT2 251 aa23.59■■□□□ 1.37
NDUFS3-213ENST00000534716 UNCXA6NJT0 531 aa23.58■■□□□ 1.37
NDUFS3-213ENST00000534716 TM4SF4P48230 202 aa23.58■■□□□ 1.37
NDUFS3-213ENST00000534716 RARSP54136 660 aaKnown RBP23.58■■□□□ 1.37
NDUFS3-213ENST00000534716 ARHGAP45Q92619 1136 aa23.58■■□□□ 1.37
NDUFS3-213ENST00000534716 TTF2Q9UNY4 1162 aaKnown RBP23.58■■□□□ 1.37
NDUFS3-213ENST00000534716 EYA2O00167 538 aa23.57■■□□□ 1.36
NDUFS3-213ENST00000534716 PUM3Q15397 648 aaKnown RBP23.57■■□□□ 1.36
NDUFS3-213ENST00000534716 TBC1D22AQ8WUA7 517 aa23.57■■□□□ 1.36
NDUFS3-213ENST00000534716 FBXO3Q9UK99 471 aa23.57■■□□□ 1.36
NDUFS3-213ENST00000534716 HDAC5Q9UQL6 1122 aa23.57■■□□□ 1.36
NDUFS3-213ENST00000534716 AOX1Q06278 1338 aa23.57■■□□□ 1.36
NDUFS3-213ENST00000534716 SSC5DA1L4H1 1573 aa23.57■■□□□ 1.36
NDUFS3-213ENST00000534716 CLRN2A0PK11 232 aa23.56■■□□□ 1.36
NDUFS3-213ENST00000534716 UBTFL1P0CB47 393 aaPredicted RBP23.56■■□□□ 1.36
NDUFS3-213ENST00000534716 RBM5P52756 815 aaKnown RBP eCLIP23.56■■□□□ 1.36
NDUFS3-213ENST00000534716 HDLBPQ00341 1268 aaKnown RBP23.56■■□□□ 1.36
NDUFS3-213ENST00000534716 SUPT20HL1Q3ZLR7 823 aa23.56■■□□□ 1.36
NDUFS3-213ENST00000534716 SPDYE2Q495Y8 402 aa23.56■■□□□ 1.36
NDUFS3-213ENST00000534716 MCOLN1Q9GZU1 580 aa23.56■■□□□ 1.36
NDUFS3-213ENST00000534716 ANGEL1Q9UNK9 670 aaKnown RBP23.56■■□□□ 1.36
NDUFS3-213ENST00000534716 ECM29Q5VYK3 1845 aa23.56■■□□□ 1.36
NDUFS3-213ENST00000534716 IFIT1P09914 478 aaKnown RBP23.55■■□□□ 1.36
NDUFS3-213ENST00000534716 ATG9AQ7Z3C6 839 aa23.55■■□□□ 1.36
NDUFS3-213ENST00000534716 MRIQ9BWK5 157 aa23.55■■□□□ 1.36
NDUFS3-213ENST00000534716 ARAP2Q8WZ64 1704 aa23.55■■□□□ 1.36
NDUFS3-213ENST00000534716 PPP1R12BO60237 982 aaPredicted RBP23.54■■□□□ 1.36
NDUFS3-213ENST00000534716 CIAO1O76071 339 aa23.54■■□□□ 1.36
NDUFS3-213ENST00000534716 BCAMP50895 628 aa23.54■■□□□ 1.36
NDUFS3-213ENST00000534716 TNFAIP1Q13829 316 aa23.54■■□□□ 1.36
NDUFS3-213ENST00000534716 PRKG1Q13976 671 aa23.54■■□□□ 1.36
NDUFS3-213ENST00000534716 DZIP1LQ8IYY4 767 aaKnown RBP23.54■■□□□ 1.36
NDUFS3-213ENST00000534716 LPIN2Q92539 896 aa23.54■■□□□ 1.36
NDUFS3-213ENST00000534716 VEZTQ9HBM0 779 aa23.54■■□□□ 1.36
NDUFS3-213ENST00000534716 PCDH10Q9P2E7 1040 aa23.54■■□□□ 1.36
NDUFS3-213ENST00000534716 ZNF70Q9UC06 446 aaPredicted RBP23.54■■□□□ 1.36
NDUFS3-213ENST00000534716 SUGT1Q9Y2Z0 365 aa23.54■■□□□ 1.36
NDUFS3-213ENST00000534716 CRKP46108 304 aa23.53■■□□□ 1.36
NDUFS3-213ENST00000534716 RASA3Q14644 834 aa23.53■■□□□ 1.36
NDUFS3-213ENST00000534716 SPRYD7Q5W111 196 aa23.53■■□□□ 1.36
NDUFS3-213ENST00000534716 FRAT2O75474 233 aaPredicted RBP23.52■■□□□ 1.36
NDUFS3-213ENST00000534716 MLLT1Q03111 559 aaPredicted RBP23.52■■□□□ 1.36
NDUFS3-213ENST00000534716 SREBF2Q12772 1141 aa23.52■■□□□ 1.36
NDUFS3-213ENST00000534716 DGKZQ13574 1117 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms