RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 PDE4DIPQ5VU43 2346 aa15.89■□□□□ 0.13
USF1-211ENST00000534633 GRM8O00222 908 aa15.89■□□□□ 0.13
USF1-211ENST00000534633 IL1R1P14778 569 aa15.89■□□□□ 0.13
USF1-211ENST00000534633 FKBP1AP62942 108 aaKnown RBP15.89■□□□□ 0.13
USF1-211ENST00000534633 SREBF2Q12772 1141 aa15.89■□□□□ 0.13
USF1-211ENST00000534633 NOM1Q5C9Z4 860 aaKnown RBP15.89■□□□□ 0.13
USF1-211ENST00000534633 LMBR1LQ6UX01 489 aa15.89■□□□□ 0.13
USF1-211ENST00000534633 CERS5Q8N5B7 392 aa15.89■□□□□ 0.13
USF1-211ENST00000534633 CDCA7LQ96GN5 454 aa15.89■□□□□ 0.13
USF1-211ENST00000534633 PTPN12Q05209 780 aaKnown RBP15.88■□□□□ 0.13
USF1-211ENST00000534633 PKN2Q16513 984 aaKnown RBP15.88■□□□□ 0.13
USF1-211ENST00000534633 CCDC57Q2TAC2 916 aa15.88■□□□□ 0.13
USF1-211ENST00000534633 LDLRAD1Q5T700 205 aa15.88■□□□□ 0.13
USF1-211ENST00000534633 LDHAL6AQ6ZMR3 332 aa15.88■□□□□ 0.13
USF1-211ENST00000534633 TRMT2AQ8IZ69 625 aaKnown RBP15.88■□□□□ 0.13
USF1-211ENST00000534633 DEFB129Q9H1M3 183 aa15.88■□□□□ 0.13
USF1-211ENST00000534633 PPP2R3BQ9Y5P8 575 aa15.88■□□□□ 0.13
USF1-211ENST00000534633 TBC1D8O95759 1140 aa15.87■□□□□ 0.13
USF1-211ENST00000534633 SLFN5Q08AF3 891 aa15.87■□□□□ 0.13
USF1-211ENST00000534633 PRKG1Q13976 671 aa15.87■□□□□ 0.13
USF1-211ENST00000534633 TAF7LQ5H9L4 462 aa15.87■□□□□ 0.13
USF1-211ENST00000534633 EPHA10Q5JZY3 1008 aa15.87■□□□□ 0.13
USF1-211ENST00000534633 ZNF296Q8WUU4 475 aaPredicted RBP15.87■□□□□ 0.13
USF1-211ENST00000534633 CFHR5Q9BXR6 569 aa15.87■□□□□ 0.13
USF1-211ENST00000534633 CNNM1Q9NRU3 951 aa15.87■□□□□ 0.13
USF1-211ENST00000534633 C9orf78Q9NZ63 289 aaPredicted RBP15.87■□□□□ 0.13
USF1-211ENST00000534633 ANGEL1Q9UNK9 670 aaKnown RBP15.87■□□□□ 0.13
USF1-211ENST00000534633 SPDYE2BA6NHP3 402 aa15.86■□□□□ 0.13
USF1-211ENST00000534633 GPR25O00155 361 aa15.86■□□□□ 0.13
USF1-211ENST00000534633 MYO1BO43795 1136 aa15.86■□□□□ 0.13
USF1-211ENST00000534633 ALDH1L1O75891 902 aa15.86■□□□□ 0.13
USF1-211ENST00000534633 SPDYE6P0CI01 402 aa15.86■□□□□ 0.13
USF1-211ENST00000534633 MKRN3Q13064 507 aaKnown RBP15.86■□□□□ 0.13
USF1-211ENST00000534633 MAP3K11Q16584 847 aa15.86■□□□□ 0.13
USF1-211ENST00000534633 CFAP100Q494V2 611 aa15.86■□□□□ 0.13
USF1-211ENST00000534633 ZNF594Q96JF6 807 aaPredicted RBP15.86■□□□□ 0.13
USF1-211ENST00000534633 SSC5DA1L4H1 1573 aa15.86■□□□□ 0.13
USF1-211ENST00000534633 OTOFQ9HC10 1997 aa15.86■□□□□ 0.13
USF1-211ENST00000534633 F8W031 263 aaPredicted RBP15.85■□□□□ 0.13
USF1-211ENST00000534633 PPP1R12BO60237 982 aaPredicted RBP15.85■□□□□ 0.13
USF1-211ENST00000534633 SOX10P56693 466 aa15.85■□□□□ 0.13
USF1-211ENST00000534633 SPRYD7Q5W111 196 aa15.85■□□□□ 0.13
USF1-211ENST00000534633 PCDHAC2Q9Y5I4 1007 aa15.85■□□□□ 0.13
USF1-211ENST00000534633 UNCXA6NJT0 531 aa15.84■□□□□ 0.13
USF1-211ENST00000534633 PLIN1O60240 522 aa15.84■□□□□ 0.13
USF1-211ENST00000534633 SLC34A2O95436 690 aa15.84■□□□□ 0.13
USF1-211ENST00000534633 ALDH1A1P00352 501 aa15.84■□□□□ 0.13
USF1-211ENST00000534633 INHBEP58166 350 aa15.84■□□□□ 0.13
USF1-211ENST00000534633 HNRNPUQ00839 825 aaKnown RBP eCLIP15.84■□□□□ 0.13
USF1-211ENST00000534633 PRMT6Q96LA8 375 aaPredicted RBP15.84■□□□□ 0.13
USF1-211ENST00000534633 SRCIN1Q9C0H9 1055 aa15.84■□□□□ 0.13
USF1-211ENST00000534633 HPS5Q9UPZ3 1129 aa15.84■□□□□ 0.13
USF1-211ENST00000534633 FAM205AQ6ZU69 1335 aa15.84■□□□□ 0.13
USF1-211ENST00000534633 CLRN2A0PK11 232 aa15.83■□□□□ 0.12
USF1-211ENST00000534633 MANSC4A6NHS7 340 aaPredicted RBP15.83■□□□□ 0.12
USF1-211ENST00000534633 E9PSI1 815 aa15.83■□□□□ 0.12
USF1-211ENST00000534633 ZBTB48P10074 688 aaPredicted RBP15.83■□□□□ 0.12
USF1-211ENST00000534633 UBE4AQ14139 1066 aa15.83■□□□□ 0.12
USF1-211ENST00000534633 SUPT20HL1Q3ZLR7 823 aa15.83■□□□□ 0.12
USF1-211ENST00000534633 SLC4A10Q6U841 1118 aa15.83■□□□□ 0.12
USF1-211ENST00000534633 SLC10A4Q96EP9 437 aa15.83■□□□□ 0.12
USF1-211ENST00000534633 FZD1Q9UP38 647 aa15.83■□□□□ 0.12
USF1-211ENST00000534633 MYH13Q9UKX3 1938 aa15.82■□□□□ 0.12
USF1-211ENST00000534633 FKTNO75072 461 aa15.82■□□□□ 0.12
USF1-211ENST00000534633 TDRD7Q8NHU6 1098 aaKnown RBP15.82■□□□□ 0.12
USF1-211ENST00000534633 WNK4Q96J92 1243 aa15.82■□□□□ 0.12
USF1-211ENST00000534633 VEZTQ9HBM0 779 aa15.82■□□□□ 0.12
USF1-211ENST00000534633 JAG2Q9Y219 1238 aa15.82■□□□□ 0.12
USF1-211ENST00000534633 UTYO14607 1347 aa15.81■□□□□ 0.12
USF1-211ENST00000534633 HIBADHP31937 336 aaKnown RBP15.81■□□□□ 0.12
USF1-211ENST00000534633 RBM5P52756 815 aaKnown RBP eCLIP15.81■□□□□ 0.12
USF1-211ENST00000534633 MFSD14BQ5SR56 506 aa15.81■□□□□ 0.12
USF1-211ENST00000534633 FBXO46Q6PJ61 603 aaPredicted RBP15.81■□□□□ 0.12
USF1-211ENST00000534633 KAZALD1Q96I82 304 aa15.81■□□□□ 0.12
USF1-211ENST00000534633 AOX1Q06278 1338 aa15.8■□□□□ 0.12
USF1-211ENST00000534633 MROH5Q6ZUA9 1318 aa15.8■□□□□ 0.12
USF1-211ENST00000534633 NBPF7P0C2Y1 421 aaPredicted RBP15.8■□□□□ 0.12
USF1-211ENST00000534633 GYG1P46976 350 aa15.8■□□□□ 0.12
USF1-211ENST00000534633 IREB2P48200 963 aaKnown RBP15.8■□□□□ 0.12
USF1-211ENST00000534633 TNFAIP1Q13829 316 aa15.8■□□□□ 0.12
USF1-211ENST00000534633 RASA3Q14644 834 aa15.8■□□□□ 0.12
USF1-211ENST00000534633 NBPF12Q5TAG4 269 aaPredicted RBP15.8■□□□□ 0.12
USF1-211ENST00000534633 IFNL1Q8IU54 200 aa15.8■□□□□ 0.12
USF1-211ENST00000534633 SUCLG2Q96I99 432 aa15.8■□□□□ 0.12
USF1-211ENST00000534633 CLMNQ96JQ2 1002 aa15.8■□□□□ 0.12
USF1-211ENST00000534633 FAM84BQ96KN1 310 aaPredicted RBP15.8■□□□□ 0.12
USF1-211ENST00000534633 R3HDMLQ9H3Y0 253 aa15.8■□□□□ 0.12
USF1-211ENST00000534633 SERPINA10Q9UK55 444 aa15.8■□□□□ 0.12
USF1-211ENST00000534633 TTF2Q9UNY4 1162 aaKnown RBP15.8■□□□□ 0.12
USF1-211ENST00000534633 RABL6Q3YEC7 729 aaPredicted RBP15.79■□□□□ 0.12
USF1-211ENST00000534633 SPDYE2Q495Y8 402 aa15.79■□□□□ 0.12
USF1-211ENST00000534633 ANKRD13AQ8IZ07 590 aa15.79■□□□□ 0.12
USF1-211ENST00000534633 PUS3Q9BZE2 481 aaKnown RBP15.79■□□□□ 0.12
USF1-211ENST00000534633 RIPOR2Q9Y4F9 1068 aa15.79■□□□□ 0.12
USF1-211ENST00000534633 USP2O75604 605 aaPredicted RBP15.78■□□□□ 0.12
USF1-211ENST00000534633 BICC1Q9H694 974 aaKnown RBP15.78■□□□□ 0.12
USF1-211ENST00000534633 ZNF70Q9UC06 446 aaPredicted RBP15.78■□□□□ 0.12
USF1-211ENST00000534633 RBBP6Q7Z6E9 1792 aaKnown RBP15.77■□□□□ 0.12
USF1-211ENST00000534633 PTPRCP08575 1304 aa15.77■□□□□ 0.12
USF1-211ENST00000534633 IGF2BP3O00425 579 aaKnown RBP eCLIP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms