RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 XAGE2Q96GT9 111 aa17.33■□□□□ 0.36
VPS11-205ENST00000534551 GMLQ99445 158 aa17.33■□□□□ 0.36
VPS11-205ENST00000534551 IL1RAPL2Q9NP60 686 aa17.33■□□□□ 0.36
VPS11-205ENST00000534551 CNOT7Q9UIV1 285 aaKnown RBP17.33■□□□□ 0.36
VPS11-205ENST00000534551 FPGT-TNNI3KV9GXZ4 949 aa17.33■□□□□ 0.36
VPS11-205ENST00000534551 F8W031 263 aaPredicted RBP17.32■□□□□ 0.36
VPS11-205ENST00000534551 HMMRO75330 724 aa17.32■□□□□ 0.36
VPS11-205ENST00000534551 TBC1D10BQ4KMP7 808 aaPredicted RBP17.32■□□□□ 0.36
VPS11-205ENST00000534551 CAVIN4Q5BKX8 364 aa17.32■□□□□ 0.36
VPS11-205ENST00000534551 KIAA0825Q8IV33 1275 aa17.32■□□□□ 0.36
VPS11-205ENST00000534551 NEUROD6Q96NK8 337 aa17.32■□□□□ 0.36
VPS11-205ENST00000534551 MAST2Q6P0Q8 1798 aa17.32■□□□□ 0.36
VPS11-205ENST00000534551 ASTN2O75129 1339 aaPredicted RBP17.31■□□□□ 0.36
VPS11-205ENST00000534551 CCDC102BQ68D86 513 aa17.31■□□□□ 0.36
VPS11-205ENST00000534551 DBNDD2Q9BQY9 259 aa17.31■□□□□ 0.36
VPS11-205ENST00000534551 PCDHAC2Q9Y5I4 1007 aa17.31■□□□□ 0.36
VPS11-205ENST00000534551 FAM205AQ6ZU69 1335 aa17.3■□□□□ 0.36
VPS11-205ENST00000534551 MYH2Q9UKX2 1941 aa17.3■□□□□ 0.36
VPS11-205ENST00000534551 TOMM70O94826 608 aa17.3■□□□□ 0.36
VPS11-205ENST00000534551 RPS12P25398 132 aaKnown RBP17.3■□□□□ 0.36
VPS11-205ENST00000534551 HIRAP54198 1017 aaPredicted RBP17.3■□□□□ 0.36
VPS11-205ENST00000534551 RBM26Q5T8P6 1007 aaKnown RBP17.3■□□□□ 0.36
VPS11-205ENST00000534551 PI16Q6UXB8 463 aa17.3■□□□□ 0.36
VPS11-205ENST00000534551 DPF2Q92785 391 aa17.3■□□□□ 0.36
VPS11-205ENST00000534551 EAF2Q96CJ1 260 aaPredicted RBP17.3■□□□□ 0.36
VPS11-205ENST00000534551 ADARB2Q9NS39 739 aaKnown RBP17.3■□□□□ 0.36
VPS11-205ENST00000534551 DBNLQ9UJU6 430 aaKnown RBP17.3■□□□□ 0.36
VPS11-205ENST00000534551 TRPM7Q96QT4 1865 aa17.3■□□□□ 0.36
VPS11-205ENST00000534551 DOCK2Q92608 1830 aa17.29■□□□□ 0.36
VPS11-205ENST00000534551 SMARCA5O60264 1052 aaPredicted RBP17.29■□□□□ 0.36
VPS11-205ENST00000534551 FRAT2O75474 233 aaPredicted RBP17.29■□□□□ 0.36
VPS11-205ENST00000534551 RASGRF1Q13972 1273 aa17.29■□□□□ 0.36
VPS11-205ENST00000534551 SCARF1Q14162 830 aa17.29■□□□□ 0.36
VPS11-205ENST00000534551 KIF4BQ2VIQ3 1234 aa17.29■□□□□ 0.36
VPS11-205ENST00000534551 MFSD14BQ5SR56 506 aa17.29■□□□□ 0.36
VPS11-205ENST00000534551 AGBL3Q8NEM8 1001 aa17.29■□□□□ 0.36
VPS11-205ENST00000534551 RHPN1Q8TCX5 695 aa17.29■□□□□ 0.36
VPS11-205ENST00000534551 CCDC8Q9H0W5 538 aaPredicted RBP17.29■□□□□ 0.36
VPS11-205ENST00000534551 AKAP2Q9Y2D5 859 aa17.29■□□□□ 0.36
VPS11-205ENST00000534551 AOX1Q06278 1338 aa17.28■□□□□ 0.36
VPS11-205ENST00000534551 MYO3BQ8WXR4 1341 aa17.28■□□□□ 0.36
VPS11-205ENST00000534551 USP17L8P0C7I0 530 aa17.28■□□□□ 0.36
VPS11-205ENST00000534551 ZNF280AP59817 542 aaPredicted RBP17.28■□□□□ 0.36
VPS11-205ENST00000534551 MAP1SQ66K74 1059 aaPredicted RBP17.28■□□□□ 0.36
VPS11-205ENST00000534551 LDHDQ86WU2 507 aa17.28■□□□□ 0.36
VPS11-205ENST00000534551 RBM46Q8TBY0 533 aaKnown RBP17.28■□□□□ 0.36
VPS11-205ENST00000534551 H7C1D1 291 aa17.27■□□□□ 0.36
VPS11-205ENST00000534551 C1QTNF8P60827 252 aa17.27■□□□□ 0.36
VPS11-205ENST00000534551 AACSQ86V21 672 aa17.27■□□□□ 0.36
VPS11-205ENST00000534551 ERC1Q8IUD2 1116 aa17.27■□□□□ 0.36
VPS11-205ENST00000534551 SCAF8Q9UPN6 1271 aaKnown RBP17.27■□□□□ 0.36
VPS11-205ENST00000534551 CLEC11AQ9Y240 323 aa17.27■□□□□ 0.36
VPS11-205ENST00000534551 FMR1Q06787 632 aaKnown RBP eCLIP17.26■□□□□ 0.35
VPS11-205ENST00000534551 USP50Q70EL3 339 aaPredicted RBP17.26■□□□□ 0.35
VPS11-205ENST00000534551 KIF1BPQ96EK5 621 aa17.26■□□□□ 0.35
VPS11-205ENST00000534551 MYOZ2Q9NPC6 264 aa17.26■□□□□ 0.35
VPS11-205ENST00000534551 GPR108Q9NPR9 543 aa17.26■□□□□ 0.35
VPS11-205ENST00000534551 MCAMP43121 646 aa17.25■□□□□ 0.35
VPS11-205ENST00000534551 HSP90AB4PQ58FF6 505 aa17.25■□□□□ 0.35
VPS11-205ENST00000534551 GORABQ5T7V8 394 aa17.25■□□□□ 0.35
VPS11-205ENST00000534551 CHADLQ6NUI6 762 aa17.25■□□□□ 0.35
VPS11-205ENST00000534551 DLK2Q6UY11 383 aa17.25■□□□□ 0.35
VPS11-205ENST00000534551 PNMA8AQ86V59 439 aaPredicted RBP17.25■□□□□ 0.35
VPS11-205ENST00000534551 SMC1BQ8NDV3 1235 aa17.25■□□□□ 0.35
VPS11-205ENST00000534551 TTF2Q9UNY4 1162 aaKnown RBP17.25■□□□□ 0.35
VPS11-205ENST00000534551 MYH7P12883 1935 aa17.25■□□□□ 0.35
VPS11-205ENST00000534551 ARID4AP29374 1257 aaPredicted RBP17.24■□□□□ 0.35
VPS11-205ENST00000534551 PRDX5P30044 214 aa17.24■□□□□ 0.35
VPS11-205ENST00000534551 FKBP1AP62942 108 aaKnown RBP17.24■□□□□ 0.35
VPS11-205ENST00000534551 NBPF9Q3BBW0 867 aa17.24■□□□□ 0.35
VPS11-205ENST00000534551 GGA3Q9NZ52 723 aa17.24■□□□□ 0.35
VPS11-205ENST00000534551 HMG20BQ9P0W2 317 aa17.24■□□□□ 0.35
VPS11-205ENST00000534551 NDUFB9Q9Y6M9 179 aa17.24■□□□□ 0.35
VPS11-205ENST00000534551 TRAF5O00463 557 aa17.23■□□□□ 0.35
VPS11-205ENST00000534551 TTC39AQ5SRH9 613 aa17.23■□□□□ 0.35
VPS11-205ENST00000534551 GLIS2Q9BZE0 524 aaPredicted RBP17.23■□□□□ 0.35
VPS11-205ENST00000534551 DCTPP1Q9H773 170 aa17.23■□□□□ 0.35
VPS11-205ENST00000534551 SNRKQ9NRH2 765 aa17.23■□□□□ 0.35
VPS11-205ENST00000534551 GNL3LQ9NVN8 582 aaKnown RBP17.23■□□□□ 0.35
VPS11-205ENST00000534551 CDK5RAP2Q96SN8 1893 aa17.22■□□□□ 0.35
VPS11-205ENST00000534551 ADM5C9JUS6 153 aa17.22■□□□□ 0.35
VPS11-205ENST00000534551 RAB11FIP3O75154 756 aa17.22■□□□□ 0.35
VPS11-205ENST00000534551 CFAP100Q494V2 611 aa17.22■□□□□ 0.35
VPS11-205ENST00000534551 LRRCC1Q9C099 1032 aa17.22■□□□□ 0.35
VPS11-205ENST00000534551 DENND2AQ9ULE3 1009 aa17.22■□□□□ 0.35
VPS11-205ENST00000534551 WNT10BO00744 389 aa17.21■□□□□ 0.35
VPS11-205ENST00000534551 SEMA3EO15041 775 aa17.21■□□□□ 0.35
VPS11-205ENST00000534551 HTRA3P83110 453 aa17.21■□□□□ 0.35
VPS11-205ENST00000534551 FSTL1Q12841 308 aa17.21■□□□□ 0.35
VPS11-205ENST00000534551 ANGEL2Q5VTE6 544 aaKnown RBP17.21■□□□□ 0.35
VPS11-205ENST00000534551 TBC1D9Q6ZT07 1266 aa17.21■□□□□ 0.35
VPS11-205ENST00000534551 CNTROBQ8N137 903 aa17.21■□□□□ 0.35
VPS11-205ENST00000534551 CLASRPQ8N2M8 674 aaKnown RBP17.21■□□□□ 0.35
VPS11-205ENST00000534551 OGFOD1Q8N543 542 aa17.21■□□□□ 0.35
VPS11-205ENST00000534551 TBC1D22AQ8WUA7 517 aa17.21■□□□□ 0.35
VPS11-205ENST00000534551 HDAC9Q9UKV0 1011 aa17.21■□□□□ 0.35
VPS11-205ENST00000534551 CLRN2A0PK11 232 aa17.2■□□□□ 0.34
VPS11-205ENST00000534551 IGHDP01880 384 aa17.2■□□□□ 0.34
VPS11-205ENST00000534551 CRKP46108 304 aa17.2■□□□□ 0.34
VPS11-205ENST00000534551 DIXDC1Q155Q3 683 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms