RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 SLFNL1Q499Z3 407 aa12.18□□□□□ -0.46
RPS3-219ENST00000534440 STYK1Q6J9G0 422 aa12.18□□□□□ -0.46
RPS3-219ENST00000534440 CASC1Q6TDU7 716 aa12.18□□□□□ -0.46
RPS3-219ENST00000534440 JMYQ8N9B5 988 aa12.18□□□□□ -0.46
RPS3-219ENST00000534440 FAM84BQ96KN1 310 aaPredicted RBP12.18□□□□□ -0.46
RPS3-219ENST00000534440 PIH1D3Q9NQM4 214 aaKnown RBP12.18□□□□□ -0.46
RPS3-219ENST00000534440 HMG20BQ9P0W2 317 aa12.18□□□□□ -0.46
RPS3-219ENST00000534440 ATP6V0A2Q9Y487 856 aa12.18□□□□□ -0.46
RPS3-219ENST00000534440 SGSM2O43147 1006 aa12.17□□□□□ -0.46
RPS3-219ENST00000534440 CYP2E1P05181 493 aaPredicted RBP12.17□□□□□ -0.46
RPS3-219ENST00000534440 UQCRFS1P1P0C7P4 283 aa12.17□□□□□ -0.46
RPS3-219ENST00000534440 KCNJ4P48050 445 aa12.17□□□□□ -0.46
RPS3-219ENST00000534440 FKBP4Q02790 459 aaKnown RBP eCLIP12.17□□□□□ -0.46
RPS3-219ENST00000534440 PRPF40BQ6NWY9 871 aaKnown RBP12.17□□□□□ -0.46
RPS3-219ENST00000534440 CWC27Q6UX04 472 aaKnown RBP12.17□□□□□ -0.46
RPS3-219ENST00000534440 FBXO33Q7Z6M2 555 aa12.17□□□□□ -0.46
RPS3-219ENST00000534440 ZNF622Q969S3 477 aaKnown RBP eCLIP12.17□□□□□ -0.46
RPS3-219ENST00000534440 KLRG1Q96E93 195 aa12.17□□□□□ -0.46
RPS3-219ENST00000534440 DIAPH3Q9NSV4 1193 aa12.17□□□□□ -0.46
RPS3-219ENST00000534440 PODXL2Q9NZ53 605 aa12.17□□□□□ -0.46
RPS3-219ENST00000534440 RNF181Q9P0P0 153 aa12.17□□□□□ -0.46
RPS3-219ENST00000534440 ANKIB1Q9P2G1 1089 aa12.17□□□□□ -0.46
RPS3-219ENST00000534440 IQSEC3Q9UPP2 1182 aaPredicted RBP12.17□□□□□ -0.46
RPS3-219ENST00000534440 H0YIN7 160 aa12.16□□□□□ -0.46
RPS3-219ENST00000534440 UFL1O94874 794 aa12.16□□□□□ -0.46
RPS3-219ENST00000534440 C15orf52Q6ZUT6 534 aaKnown RBP12.16□□□□□ -0.46
RPS3-219ENST00000534440 TMC4Q7Z404 712 aa12.16□□□□□ -0.46
RPS3-219ENST00000534440 ZNF589Q86UQ0 364 aaPredicted RBP12.16□□□□□ -0.46
RPS3-219ENST00000534440 SP8Q8IXZ3 490 aa12.16□□□□□ -0.46
RPS3-219ENST00000534440 SPATA5Q8NB90 893 aa12.16□□□□□ -0.46
RPS3-219ENST00000534440 RRAGCQ9HB90 399 aa12.16□□□□□ -0.46
RPS3-219ENST00000534440 POLLQ9UGP5 575 aa12.16□□□□□ -0.46
RPS3-219ENST00000534440 LEMD3Q9Y2U8 911 aa12.16□□□□□ -0.46
RPS3-219ENST00000534440 BRCA1P38398 1863 aaKnown RBP12.16□□□□□ -0.46
RPS3-219ENST00000534440 RBM25P49756 843 aaKnown RBP12.15□□□□□ -0.46
RPS3-219ENST00000534440 TBC1D16Q8TBP0 767 aa12.15□□□□□ -0.46
RPS3-219ENST00000534440 C7orf43Q8WVR3 580 aa12.15□□□□□ -0.46
RPS3-219ENST00000534440 SEC62Q99442 399 aaKnown RBP12.15□□□□□ -0.46
RPS3-219ENST00000534440 USP26Q9BXU7 913 aa12.15□□□□□ -0.46
RPS3-219ENST00000534440 C22orf23Q9BZE7 217 aa12.15□□□□□ -0.46
RPS3-219ENST00000534440 LSG1Q9H089 658 aaKnown RBP12.15□□□□□ -0.46
RPS3-219ENST00000534440 GGA1Q9UJY5 639 aa12.15□□□□□ -0.46
RPS3-219ENST00000534440 NSFL1CQ9UNZ2 370 aaKnown RBP12.15□□□□□ -0.46
RPS3-219ENST00000534440 MAST2Q6P0Q8 1798 aa12.15□□□□□ -0.46
RPS3-219ENST00000534440 RAD50Q92878 1312 aa12.14□□□□□ -0.47
RPS3-219ENST00000534440 ZC3H4Q9UPT8 1303 aaKnown RBP12.14□□□□□ -0.47
RPS3-219ENST00000534440 HIP1O00291 1037 aa12.14□□□□□ -0.47
RPS3-219ENST00000534440 ATP2B4P23634 1241 aa12.14□□□□□ -0.47
RPS3-219ENST00000534440 ALDH1B1P30837 517 aa12.14□□□□□ -0.47
RPS3-219ENST00000534440 KIF2CQ99661 725 aa12.14□□□□□ -0.47
RPS3-219ENST00000534440 UPF2Q9HAU5 1272 aaKnown RBP12.14□□□□□ -0.47
RPS3-219ENST00000534440 MAST3O60307 1309 aa12.13□□□□□ -0.47
RPS3-219ENST00000534440 M0R2C6 588 aa12.13□□□□□ -0.47
RPS3-219ENST00000534440 REC8O95072 547 aa12.13□□□□□ -0.47
RPS3-219ENST00000534440 HIBADHP31937 336 aaKnown RBP12.13□□□□□ -0.47
RPS3-219ENST00000534440 RASSF7Q02833 373 aa12.13□□□□□ -0.47
RPS3-219ENST00000534440 CAVIN4Q5BKX8 364 aa12.13□□□□□ -0.47
RPS3-219ENST00000534440 ZMYM1Q5SVZ6 1142 aa12.13□□□□□ -0.47
RPS3-219ENST00000534440 CCDC129Q6ZRS4 1044 aa12.13□□□□□ -0.47
RPS3-219ENST00000534440 ANO2Q9NQ90 1003 aa12.13□□□□□ -0.47
RPS3-219ENST00000534440 ZNF646O15015 1829 aaPredicted RBP12.13□□□□□ -0.47
RPS3-219ENST00000534440 TCRBV5S4A2TA0A5A2 114 aa12.12□□□□□ -0.47
RPS3-219ENST00000534440 GLTPD2A6NH11 291 aa12.12□□□□□ -0.47
RPS3-219ENST00000534440 RNF113AO15541 343 aaKnown RBP12.12□□□□□ -0.47
RPS3-219ENST00000534440 LMNB1P20700 586 aa12.12□□□□□ -0.47
RPS3-219ENST00000534440 ADD2P35612 726 aa12.12□□□□□ -0.47
RPS3-219ENST00000534440 PTH1RQ03431 593 aa12.12□□□□□ -0.47
RPS3-219ENST00000534440 COL13A1Q5TAT6 717 aaPredicted RBP12.12□□□□□ -0.47
RPS3-219ENST00000534440 VPS37DQ86XT2 251 aa12.12□□□□□ -0.47
RPS3-219ENST00000534440 CNKSR1Q969H4 720 aa12.12□□□□□ -0.47
RPS3-219ENST00000534440 OSBP2Q969R2 916 aa12.12□□□□□ -0.47
RPS3-219ENST00000534440 GNL3LQ9NVN8 582 aaKnown RBP12.12□□□□□ -0.47
RPS3-219ENST00000534440 JAG2Q9Y219 1238 aa12.12□□□□□ -0.47
RPS3-219ENST00000534440 PDS5AQ29RF7 1337 aaKnown RBP12.11□□□□□ -0.47
RPS3-219ENST00000534440 CCDC171Q6TFL3 1326 aa12.11□□□□□ -0.47
RPS3-219ENST00000534440 POTECB2RU33 542 aa12.11□□□□□ -0.47
RPS3-219ENST00000534440 C6orf229H3BNL8 230 aa12.11□□□□□ -0.47
RPS3-219ENST00000534440 NFKBIEO00221 500 aa12.11□□□□□ -0.47
RPS3-219ENST00000534440 SEMA3EO15041 775 aa12.11□□□□□ -0.47
RPS3-219ENST00000534440 IDH1O75874 414 aaKnown RBP12.11□□□□□ -0.47
RPS3-219ENST00000534440 PDE6AP16499 860 aa12.11□□□□□ -0.47
RPS3-219ENST00000534440 TTF1Q15361 905 aaPredicted RBP12.11□□□□□ -0.47
RPS3-219ENST00000534440 DPP8Q6V1X1 898 aaPredicted RBP12.11□□□□□ -0.47
RPS3-219ENST00000534440 MPNDQ8N594 471 aa12.11□□□□□ -0.47
RPS3-219ENST00000534440 TTLL6Q8N841 843 aa12.11□□□□□ -0.47
RPS3-219ENST00000534440 SMC1BQ8NDV3 1235 aa12.11□□□□□ -0.47
RPS3-219ENST00000534440 TDRD7Q8NHU6 1098 aaKnown RBP12.11□□□□□ -0.47
RPS3-219ENST00000534440 RUFY2Q8WXA3 655 aa12.11□□□□□ -0.47
RPS3-219ENST00000534440 PALD1Q9ULE6 856 aa12.11□□□□□ -0.47
RPS3-219ENST00000534440 FOXP2O15409 715 aa12.1□□□□□ -0.47
RPS3-219ENST00000534440 CHAF1AQ13111 956 aaPredicted RBP12.1□□□□□ -0.47
RPS3-219ENST00000534440 ZNF804AQ7Z570 1209 aa12.1□□□□□ -0.47
RPS3-219ENST00000534440 TICAM2Q86XR7 235 aa12.1□□□□□ -0.47
RPS3-219ENST00000534440 ZNF384Q8TF68 577 aa12.1□□□□□ -0.47
RPS3-219ENST00000534440 APPBP2Q92624 585 aa12.1□□□□□ -0.47
RPS3-219ENST00000534440 CD209Q9NNX6 404 aa12.1□□□□□ -0.47
RPS3-219ENST00000534440 DENND2AQ9ULE3 1009 aa12.1□□□□□ -0.47
RPS3-219ENST00000534440 ZNF532Q9HCE3 1301 aa12.1□□□□□ -0.47
RPS3-219ENST00000534440 COL4A5P29400 1685 aa12.1□□□□□ -0.47
RPS3-219ENST00000534440 C21orf2O43822 256 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms