RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 CARD10Q9BWT7 1032 aa22.27■■□□□ 1.16
SMPD1-210ENST00000534405 DEF6Q9H4E7 631 aa22.27■■□□□ 1.16
SMPD1-210ENST00000534405 AFDNP55196 1824 aaKnown RBP22.27■■□□□ 1.16
SMPD1-210ENST00000534405 TAF5LO75529 589 aa22.27■■□□□ 1.16
SMPD1-210ENST00000534405 PSMA5P28066 241 aa22.27■■□□□ 1.16
SMPD1-210ENST00000534405 ACTN2P35609 894 aa22.27■■□□□ 1.16
SMPD1-210ENST00000534405 TOB2Q14106 344 aaPredicted RBP22.27■■□□□ 1.16
SMPD1-210ENST00000534405 SUGP1Q8IWZ8 645 aaKnown RBP22.27■■□□□ 1.16
SMPD1-210ENST00000534405 FMNL2Q96PY5 1086 aa22.27■■□□□ 1.16
SMPD1-210ENST00000534405 ATF3P18847 181 aa22.26■■□□□ 1.15
SMPD1-210ENST00000534405 BLOC1S2Q6QNY1 142 aa22.26■■□□□ 1.15
SMPD1-210ENST00000534405 ZCCHC17Q9NP64 241 aaKnown RBP22.26■■□□□ 1.15
SMPD1-210ENST00000534405 TMEM94Q12767 1356 aa22.26■■□□□ 1.15
SMPD1-210ENST00000534405 IVLP07476 585 aa22.26■■□□□ 1.15
SMPD1-210ENST00000534405 GLI3P10071 1580 aa22.26■■□□□ 1.15
SMPD1-210ENST00000534405 ATP5JP18859 108 aa22.26■■□□□ 1.15
SMPD1-210ENST00000534405 RPS6KB1P23443 525 aa22.26■■□□□ 1.15
SMPD1-210ENST00000534405 GSCP56915 257 aaPredicted RBP22.26■■□□□ 1.15
SMPD1-210ENST00000534405 SWT1Q5T5J6 900 aaKnown RBP22.26■■□□□ 1.15
SMPD1-210ENST00000534405 DONSONQ9NYP3 566 aa22.26■■□□□ 1.15
SMPD1-210ENST00000534405 ARFGEF2Q9Y6D5 1785 aa22.26■■□□□ 1.15
SMPD1-210ENST00000534405 A0A087WZG4 1122 aa22.25■■□□□ 1.15
SMPD1-210ENST00000534405 CASP7P55210 303 aa22.25■■□□□ 1.15
SMPD1-210ENST00000534405 SNW1Q13573 536 aaKnown RBP22.25■■□□□ 1.15
SMPD1-210ENST00000534405 SMC1AQ14683 1233 aaKnown RBP22.25■■□□□ 1.15
SMPD1-210ENST00000534405 DBNDD2Q9BQY9 259 aa22.25■■□□□ 1.15
SMPD1-210ENST00000534405 CCDC69A6NI79 296 aa22.25■■□□□ 1.15
SMPD1-210ENST00000534405 TUBB4AP04350 444 aa22.25■■□□□ 1.15
SMPD1-210ENST00000534405 CAMK4Q16566 473 aa22.25■■□□□ 1.15
SMPD1-210ENST00000534405 CDC37L1Q7L3B6 337 aa22.25■■□□□ 1.15
SMPD1-210ENST00000534405 CCDC91Q7Z6B0 441 aa22.25■■□□□ 1.15
SMPD1-210ENST00000534405 TNMDQ9H2S6 317 aa22.25■■□□□ 1.15
SMPD1-210ENST00000534405 TBC1D8O95759 1140 aa22.24■■□□□ 1.15
SMPD1-210ENST00000534405 CAVIN2O95810 425 aa22.24■■□□□ 1.15
SMPD1-210ENST00000534405 ZNF165P49910 485 aa22.24■■□□□ 1.15
SMPD1-210ENST00000534405 LARP1BQ659C4 914 aaKnown RBP22.24■■□□□ 1.15
SMPD1-210ENST00000534405 FAM173BQ6P4H8 233 aa22.24■■□□□ 1.15
SMPD1-210ENST00000534405 EP400NLQ6ZTU2 488 aa22.24■■□□□ 1.15
SMPD1-210ENST00000534405 SASH3O75995 380 aa22.23■■□□□ 1.15
SMPD1-210ENST00000534405 LIG1P18858 919 aa22.23■■□□□ 1.15
SMPD1-210ENST00000534405 FERMT3Q86UX7 667 aa22.23■■□□□ 1.15
SMPD1-210ENST00000534405 SEC62Q99442 399 aaKnown RBP22.23■■□□□ 1.15
SMPD1-210ENST00000534405 ABCC6O95255 1503 aa22.23■■□□□ 1.15
SMPD1-210ENST00000534405 CABP4P57796 275 aa22.23■■□□□ 1.15
SMPD1-210ENST00000534405 CCDC129Q6ZRS4 1044 aa22.23■■□□□ 1.15
SMPD1-210ENST00000534405 CKAP2LQ8IYA6 745 aa22.23■■□□□ 1.15
SMPD1-210ENST00000534405 UBXN4Q92575 508 aa22.23■■□□□ 1.15
SMPD1-210ENST00000534405 PKD1L3Q7Z443 1732 aa22.23■■□□□ 1.15
SMPD1-210ENST00000534405 ZNF609O15014 1411 aa22.23■■□□□ 1.15
SMPD1-210ENST00000534405 USPL1Q5W0Q7 1092 aa22.22■■□□□ 1.15
SMPD1-210ENST00000534405 TPM1P09493 284 aa22.22■■□□□ 1.15
SMPD1-210ENST00000534405 CNPY4Q8N129 248 aa22.22■■□□□ 1.15
SMPD1-210ENST00000534405 CXorf56Q9H5V9 222 aa22.22■■□□□ 1.15
SMPD1-210ENST00000534405 ADAM21Q9UKJ8 722 aa22.22■■□□□ 1.15
SMPD1-210ENST00000534405 STRCP1A6NGW2 1772 aa22.21■■□□□ 1.15
SMPD1-210ENST00000534405 NBPF26B4DH59 902 aa22.21■■□□□ 1.15
SMPD1-210ENST00000534405 STK3Q13188 491 aa22.21■■□□□ 1.15
SMPD1-210ENST00000534405 SART3Q15020 963 aaKnown RBP22.21■■□□□ 1.15
SMPD1-210ENST00000534405 NBPF14Q5TI25 921 aa22.21■■□□□ 1.15
SMPD1-210ENST00000534405 NBPF10Q6P3W6 841 aaKnown RBP22.21■■□□□ 1.15
SMPD1-210ENST00000534405 NBPF15Q8N660 670 aa22.21■■□□□ 1.15
SMPD1-210ENST00000534405 ALDH8A1Q9H2A2 487 aaPredicted RBP22.21■■□□□ 1.15
SMPD1-210ENST00000534405 DDX19AQ9NUU7 478 aaKnown RBP22.21■■□□□ 1.15
SMPD1-210ENST00000534405 SEC31AO94979 1220 aaKnown RBP22.21■■□□□ 1.15
SMPD1-210ENST00000534405 LMBR1LQ6UX01 489 aa22.21■■□□□ 1.15
SMPD1-210ENST00000534405 TTC6Q86TZ1 520 aa22.21■■□□□ 1.15
SMPD1-210ENST00000534405 PLBD2Q8NHP8 589 aa22.21■■□□□ 1.15
SMPD1-210ENST00000534405 PPM1EQ8WY54 764 aa22.21■■□□□ 1.15
SMPD1-210ENST00000534405 HMG20BQ9P0W2 317 aa22.21■■□□□ 1.15
SMPD1-210ENST00000534405 TNS3Q68CZ2 1445 aa22.2■■□□□ 1.15
SMPD1-210ENST00000534405 KIF1CO43896 1103 aaKnown RBP22.2■■□□□ 1.14
SMPD1-210ENST00000534405 RPS6KA5O75582 802 aa22.2■■□□□ 1.14
SMPD1-210ENST00000534405 LMAN1P49257 510 aa22.2■■□□□ 1.14
SMPD1-210ENST00000534405 CCDC158Q5M9N0 1113 aa22.2■■□□□ 1.14
SMPD1-210ENST00000534405 ANKRD1Q15327 319 aa22.2■■□□□ 1.14
SMPD1-210ENST00000534405 CLSTN2Q9H4D0 955 aa22.2■■□□□ 1.14
SMPD1-210ENST00000534405 CCDC9Q9Y3X0 531 aaKnown RBP22.2■■□□□ 1.14
SMPD1-210ENST00000534405 DDX46Q7L014 1031 aaKnown RBP22.19■■□□□ 1.14
SMPD1-210ENST00000534405 DNAJC25Q9H1X3 360 aa22.19■■□□□ 1.14
SMPD1-210ENST00000534405 EIF3CLB5ME19 914 aaKnown RBP22.19■■□□□ 1.14
SMPD1-210ENST00000534405 FOXO4P98177 505 aa22.19■■□□□ 1.14
SMPD1-210ENST00000534405 LEKR1Q6ZMV7 388 aa22.19■■□□□ 1.14
SMPD1-210ENST00000534405 EIF3CQ99613 913 aaKnown RBP22.19■■□□□ 1.14
SMPD1-210ENST00000534405 CPP00450 1065 aa22.18■■□□□ 1.14
SMPD1-210ENST00000534405 MCTP2Q6DN12 878 aa22.18■■□□□ 1.14
SMPD1-210ENST00000534405 CC2D1AQ6P1N0 951 aaPredicted RBP22.18■■□□□ 1.14
SMPD1-210ENST00000534405 PPP1R13BQ96KQ4 1090 aa22.18■■□□□ 1.14
SMPD1-210ENST00000534405 HAUS7Q99871 368 aa22.18■■□□□ 1.14
SMPD1-210ENST00000534405 DACT1Q9NYF0 836 aa22.18■■□□□ 1.14
SMPD1-210ENST00000534405 TADA3O75528 432 aa22.18■■□□□ 1.14
SMPD1-210ENST00000534405 IQCB1Q15051 598 aa22.18■■□□□ 1.14
SMPD1-210ENST00000534405 TTLL7Q6ZT98 887 aa22.18■■□□□ 1.14
SMPD1-210ENST00000534405 SRRTQ9BXP5 876 aaKnown RBP22.18■■□□□ 1.14
SMPD1-210ENST00000534405 PSDA5PKW4 1024 aaPredicted RBP22.17■■□□□ 1.14
SMPD1-210ENST00000534405 E4F1Q66K89 784 aaPredicted RBP22.17■■□□□ 1.14
SMPD1-210ENST00000534405 LAMB4A4D0S4 1761 aa22.17■■□□□ 1.14
SMPD1-210ENST00000534405 CYP21A2P08686 494 aa22.17■■□□□ 1.14
SMPD1-210ENST00000534405 CEP120Q8N960 986 aa22.17■■□□□ 1.14
SMPD1-210ENST00000534405 CEP89Q96ST8 783 aa22.17■■□□□ 1.14
SMPD1-210ENST00000534405 MED4Q9NPJ6 270 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms