RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 FKBP1BP68106 108 aa29.19■■■□□ 2.26
YIF1A-213ENST00000534374 LRRC24Q50LG9 513 aa29.19■■■□□ 2.26
YIF1A-213ENST00000534374 RGMBQ6NW40 437 aa29.19■■■□□ 2.26
YIF1A-213ENST00000534374 NOGQ13253 232 aa29.18■■■□□ 2.26
YIF1A-213ENST00000534374 MTMR14Q8NCE2 650 aa29.18■■■□□ 2.26
YIF1A-213ENST00000534374 CCDC102AQ96A19 550 aa29.18■■■□□ 2.26
YIF1A-213ENST00000534374 THSD7BQ9C0I4 1608 aa29.18■■■□□ 2.26
YIF1A-213ENST00000534374 FAM205AQ6ZU69 1335 aa29.18■■■□□ 2.26
YIF1A-213ENST00000534374 PDE8BO95263 885 aa29.17■■■□□ 2.26
YIF1A-213ENST00000534374 UBTFL1P0CB47 393 aaPredicted RBP29.17■■■□□ 2.26
YIF1A-213ENST00000534374 LBX1P52954 281 aa29.17■■■□□ 2.26
YIF1A-213ENST00000534374 METTL24Q5JXM2 366 aa29.17■■■□□ 2.26
YIF1A-213ENST00000534374 KIF16BQ96L93 1317 aa29.17■■■□□ 2.26
YIF1A-213ENST00000534374 GYG1P46976 350 aa29.16■■■□□ 2.26
YIF1A-213ENST00000534374 FBXO33Q7Z6M2 555 aa29.16■■■□□ 2.26
YIF1A-213ENST00000534374 VGLL2Q8N8G2 317 aa29.16■■■□□ 2.26
YIF1A-213ENST00000534374 HSPA8P11142 646 aaKnown RBP29.15■■■□□ 2.26
YIF1A-213ENST00000534374 RFX5P48382 616 aaPredicted RBP29.15■■■□□ 2.26
YIF1A-213ENST00000534374 DLGAP5Q15398 846 aa29.15■■■□□ 2.26
YIF1A-213ENST00000534374 KLHDC4Q8TBB5 520 aa29.15■■■□□ 2.26
YIF1A-213ENST00000534374 APOBEC3FQ8IUX4 373 aaKnown RBP29.14■■■□□ 2.26
YIF1A-213ENST00000534374 EYA2O00167 538 aa29.13■■■□□ 2.25
YIF1A-213ENST00000534374 IPO8O15397 1037 aaKnown RBP29.13■■■□□ 2.25
YIF1A-213ENST00000534374 CA12O43570 354 aa29.13■■■□□ 2.25
YIF1A-213ENST00000534374 ZNF157P51786 506 aaPredicted RBP29.13■■■□□ 2.25
YIF1A-213ENST00000534374 PTPN12Q05209 780 aaKnown RBP29.13■■■□□ 2.25
YIF1A-213ENST00000534374 INTS3Q68E01 1043 aaKnown RBP29.13■■■□□ 2.25
YIF1A-213ENST00000534374 FBXO3Q9UK99 471 aa29.13■■■□□ 2.25
YIF1A-213ENST00000534374 FAM155AB1AL88 458 aaPredicted RBP29.12■■■□□ 2.25
YIF1A-213ENST00000534374 CAVIN4Q5BKX8 364 aa29.12■■■□□ 2.25
YIF1A-213ENST00000534374 VPS37DQ86XT2 251 aa29.12■■■□□ 2.25
YIF1A-213ENST00000534374 SCAF8Q9UPN6 1271 aaKnown RBP29.12■■■□□ 2.25
YIF1A-213ENST00000534374 F8W031 263 aaPredicted RBP29.1■■■□□ 2.25
YIF1A-213ENST00000534374 CFAP100Q494V2 611 aa29.1■■■□□ 2.25
YIF1A-213ENST00000534374 MFSD14BQ5SR56 506 aa29.1■■■□□ 2.25
YIF1A-213ENST00000534374 JAG2Q9Y219 1238 aa29.1■■■□□ 2.25
YIF1A-213ENST00000534374 FGFR2P21802 821 aa29.09■■■□□ 2.25
YIF1A-213ENST00000534374 NF2P35240 595 aa29.09■■■□□ 2.25
YIF1A-213ENST00000534374 HNRNPUQ00839 825 aaKnown RBP eCLIP29.09■■■□□ 2.25
YIF1A-213ENST00000534374 PUM3Q15397 648 aaKnown RBP29.09■■■□□ 2.25
YIF1A-213ENST00000534374 PRAMEF18Q5VWM3 479 aa29.09■■■□□ 2.25
YIF1A-213ENST00000534374 SPDYE2BA6NHP3 402 aa29.08■■■□□ 2.25
YIF1A-213ENST00000534374 MYO1BO43795 1136 aa29.08■■■□□ 2.25
YIF1A-213ENST00000534374 IFIT1P09914 478 aaKnown RBP29.08■■■□□ 2.25
YIF1A-213ENST00000534374 SPDYE6P0CI01 402 aa29.08■■■□□ 2.25
YIF1A-213ENST00000534374 PRMT6Q96LA8 375 aaPredicted RBP29.08■■■□□ 2.25
YIF1A-213ENST00000534374 ZIC5Q96T25 663 aa29.08■■■□□ 2.25
YIF1A-213ENST00000534374 CIAO1O76071 339 aa29.07■■■□□ 2.24
YIF1A-213ENST00000534374 SLC10A3P09131 477 aa29.07■■■□□ 2.24
YIF1A-213ENST00000534374 ATG9AQ7Z3C6 839 aa29.07■■■□□ 2.24
YIF1A-213ENST00000534374 LRRFIP2Q9Y608 721 aaKnown RBP29.07■■■□□ 2.24
YIF1A-213ENST00000534374 GNAI3P08754 354 aa29.06■■■□□ 2.24
YIF1A-213ENST00000534374 ATF7IPQ6VMQ6 1270 aa29.06■■■□□ 2.24
YIF1A-213ENST00000534374 TBC1D22AQ8WUA7 517 aa29.06■■■□□ 2.24
YIF1A-213ENST00000534374 MEIS3Q99687 375 aa29.06■■■□□ 2.24
YIF1A-213ENST00000534374 DEFB129Q9H1M3 183 aa29.06■■■□□ 2.24
YIF1A-213ENST00000534374 SERPINA10Q9UK55 444 aa29.06■■■□□ 2.24
YIF1A-213ENST00000534374 PAPPA2Q9BXP8 1791 aa29.06■■■□□ 2.24
YIF1A-213ENST00000534374 BCAR3O75815 825 aa29.05■■■□□ 2.24
YIF1A-213ENST00000534374 BCAMP50895 628 aa29.05■■■□□ 2.24
YIF1A-213ENST00000534374 REM2Q8IYK8 340 aaPredicted RBP29.05■■■□□ 2.24
YIF1A-213ENST00000534374 LPIN2Q92539 896 aa29.05■■■□□ 2.24
YIF1A-213ENST00000534374 TTF2Q9UNY4 1162 aaKnown RBP29.05■■■□□ 2.24
YIF1A-213ENST00000534374 PPP2R3BQ9Y5P8 575 aa29.05■■■□□ 2.24
YIF1A-213ENST00000534374 FRAT2O75474 233 aaPredicted RBP29.04■■■□□ 2.24
YIF1A-213ENST00000534374 TRIM27P14373 513 aa29.04■■■□□ 2.24
YIF1A-213ENST00000534374 KIF23Q02241 960 aaPredicted RBP29.04■■■□□ 2.24
YIF1A-213ENST00000534374 PCDHAC2Q9Y5I4 1007 aa29.04■■■□□ 2.24
YIF1A-213ENST00000534374 UBE2Q2LH0YL09 131 aa29.03■■■□□ 2.24
YIF1A-213ENST00000534374 SLC5A1P13866 664 aa29.03■■■□□ 2.24
YIF1A-213ENST00000534374 RBM5P52756 815 aaKnown RBP eCLIP29.03■■■□□ 2.24
YIF1A-213ENST00000534374 MOB2Q70IA6 237 aa29.03■■■□□ 2.24
YIF1A-213ENST00000534374 COPRSQ9NQ92 184 aa29.03■■■□□ 2.24
YIF1A-213ENST00000534374 CEP126Q9P2H0 1117 aa29.03■■■□□ 2.24
YIF1A-213ENST00000534374 COL1A1P02452 1464 aaPredicted RBP29.03■■■□□ 2.24
YIF1A-213ENST00000534374 TTLL12Q14166 644 aaPredicted RBP29.02■■■□□ 2.24
YIF1A-213ENST00000534374 ARMC9Q7Z3E5 817 aa29.02■■■□□ 2.24
YIF1A-213ENST00000534374 MRIQ9BWK5 157 aa29.02■■■□□ 2.24
YIF1A-213ENST00000534374 IQSEC3Q9UPP2 1182 aaPredicted RBP29.02■■■□□ 2.24
YIF1A-213ENST00000534374 IL15P40933 162 aaPredicted RBP29.01■■■□□ 2.23
YIF1A-213ENST00000534374 HDLBPQ00341 1268 aaKnown RBP29.01■■■□□ 2.23
YIF1A-213ENST00000534374 RASAL3Q86YV0 1011 aa29.01■■■□□ 2.23
YIF1A-213ENST00000534374 FRAT1Q92837 279 aaPredicted RBP29.01■■■□□ 2.23
YIF1A-213ENST00000534374 CSRNP1Q96S65 589 aa29■■■□□ 2.23
YIF1A-213ENST00000534374 SIL1Q9H173 461 aa29■■■□□ 2.23
YIF1A-213ENST00000534374 SUGT1Q9Y2Z0 365 aa29■■■□□ 2.23
YIF1A-213ENST00000534374 CLRN2A0PK11 232 aa28.99■■■□□ 2.23
YIF1A-213ENST00000534374 CHAF1AQ13111 956 aaPredicted RBP28.99■■■□□ 2.23
YIF1A-213ENST00000534374 MTX1Q13505 466 aa28.99■■■□□ 2.23
YIF1A-213ENST00000534374 SUPT20HL1Q3ZLR7 823 aa28.99■■■□□ 2.23
YIF1A-213ENST00000534374 ECM29Q5VYK3 1845 aa28.99■■■□□ 2.23
YIF1A-213ENST00000534374 LDLRAD1Q5T700 205 aa28.98■■■□□ 2.23
YIF1A-213ENST00000534374 ZKSCAN2Q63HK3 967 aa28.98■■■□□ 2.23
YIF1A-213ENST00000534374 DZIP1LQ8IYY4 767 aaKnown RBP28.98■■■□□ 2.23
YIF1A-213ENST00000534374 SAGE1Q9NXZ1 904 aa28.98■■■□□ 2.23
YIF1A-213ENST00000534374 TSKSQ9UJT2 592 aa28.98■■■□□ 2.23
YIF1A-213ENST00000534374 CRKP46108 304 aa28.97■■■□□ 2.23
YIF1A-213ENST00000534374 SPDYE2Q495Y8 402 aa28.97■■■□□ 2.23
YIF1A-213ENST00000534374 VEZTQ9HBM0 779 aa28.97■■■□□ 2.23
YIF1A-213ENST00000534374 ZNF70Q9UC06 446 aaPredicted RBP28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms