RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 APOBEC3FQ8IUX4 373 aaKnown RBP16.82■□□□□ 0.28
CAPN1-228ENST00000534373 REM2Q8IYK8 340 aaPredicted RBP16.82■□□□□ 0.28
CAPN1-228ENST00000534373 TDRD7Q8NHU6 1098 aaKnown RBP16.82■□□□□ 0.28
CAPN1-228ENST00000534373 PUS3Q9BZE2 481 aaKnown RBP16.82■□□□□ 0.28
CAPN1-228ENST00000534373 NF2P35240 595 aa16.81■□□□□ 0.28
CAPN1-228ENST00000534373 DLGAP5Q15398 846 aa16.81■□□□□ 0.28
CAPN1-228ENST00000534373 CERS5Q8N5B7 392 aa16.81■□□□□ 0.28
CAPN1-228ENST00000534373 FAM84BQ96KN1 310 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-228ENST00000534373 API5Q9BZZ5 524 aaKnown RBP16.81■□□□□ 0.28
CAPN1-228ENST00000534373 A0A1B0GUL6 1792 aa16.8■□□□□ 0.28
CAPN1-228ENST00000534373 PDE8BO95263 885 aa16.8■□□□□ 0.28
CAPN1-228ENST00000534373 SLC10A3P09131 477 aa16.8■□□□□ 0.28
CAPN1-228ENST00000534373 ARHGAP45Q92619 1136 aa16.8■□□□□ 0.28
CAPN1-228ENST00000534373 NOB1Q9ULX3 412 aaKnown RBP16.8■□□□□ 0.28
CAPN1-228ENST00000534373 MYO1BO43795 1136 aa16.79■□□□□ 0.28
CAPN1-228ENST00000534373 METTL24Q5JXM2 366 aa16.79■□□□□ 0.28
CAPN1-228ENST00000534373 FBXO33Q7Z6M2 555 aa16.79■□□□□ 0.28
CAPN1-228ENST00000534373 GYG1P46976 350 aa16.78■□□□□ 0.28
CAPN1-228ENST00000534373 RARSP54136 660 aaKnown RBP16.78■□□□□ 0.28
CAPN1-228ENST00000534373 KIF23Q02241 960 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-228ENST00000534373 LRRC24Q50LG9 513 aa16.78■□□□□ 0.28
CAPN1-228ENST00000534373 CAVIN4Q5BKX8 364 aa16.78■□□□□ 0.28
CAPN1-228ENST00000534373 VGLL2Q8N8G2 317 aa16.78■□□□□ 0.28
CAPN1-228ENST00000534373 ZIC5Q96T25 663 aa16.78■□□□□ 0.28
CAPN1-228ENST00000534373 SAGE1Q9NXZ1 904 aa16.78■□□□□ 0.28
CAPN1-228ENST00000534373 FBXO3Q9UK99 471 aa16.78■□□□□ 0.28
CAPN1-228ENST00000534373 PPP2R3BQ9Y5P8 575 aa16.78■□□□□ 0.28
CAPN1-228ENST00000534373 PAPPA2Q9BXP8 1791 aa16.78■□□□□ 0.28
CAPN1-228ENST00000534373 KIF16BQ96L93 1317 aa16.77■□□□□ 0.28
CAPN1-228ENST00000534373 UBTFL1P0CB47 393 aaPredicted RBP16.77■□□□□ 0.28
CAPN1-228ENST00000534373 MFSD14BQ5SR56 506 aa16.77■□□□□ 0.28
CAPN1-228ENST00000534373 VPS37DQ86XT2 251 aa16.77■□□□□ 0.28
CAPN1-228ENST00000534373 SERPINA10Q9UK55 444 aa16.77■□□□□ 0.28
CAPN1-228ENST00000534373 SCAF8Q9UPN6 1271 aaKnown RBP16.77■□□□□ 0.28
CAPN1-228ENST00000534373 COL1A1P02452 1464 aaPredicted RBP16.77■□□□□ 0.28
CAPN1-228ENST00000534373 SPDYE2BA6NHP3 402 aa16.76■□□□□ 0.27
CAPN1-228ENST00000534373 EYA2O00167 538 aa16.76■□□□□ 0.27
CAPN1-228ENST00000534373 SPDYE6P0CI01 402 aa16.76■□□□□ 0.27
CAPN1-228ENST00000534373 RFX5P48382 616 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-228ENST00000534373 CFAP100Q494V2 611 aa16.76■□□□□ 0.27
CAPN1-228ENST00000534373 PRAMEF18Q5VWM3 479 aa16.76■□□□□ 0.27
CAPN1-228ENST00000534373 ARMC9Q7Z3E5 817 aa16.76■□□□□ 0.27
CAPN1-228ENST00000534373 RASAL3Q86YV0 1011 aa16.76■□□□□ 0.27
CAPN1-228ENST00000534373 CSRNP1Q96S65 589 aa16.76■□□□□ 0.27
CAPN1-228ENST00000534373 DEFB129Q9H1M3 183 aa16.76■□□□□ 0.27
CAPN1-228ENST00000534373 F8W031 263 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-228ENST00000534373 UBE2Q2LH0YL09 131 aa16.75■□□□□ 0.27
CAPN1-228ENST00000534373 IFIT1P09914 478 aaKnown RBP16.75■□□□□ 0.27
CAPN1-228ENST00000534373 PTPN12Q05209 780 aaKnown RBP16.75■□□□□ 0.27
CAPN1-228ENST00000534373 TTLL12Q14166 644 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-228ENST00000534373 PUM3Q15397 648 aaKnown RBP16.75■□□□□ 0.27
CAPN1-228ENST00000534373 KLHDC4Q8TBB5 520 aa16.75■□□□□ 0.27
CAPN1-228ENST00000534373 TBC1D22AQ8WUA7 517 aa16.75■□□□□ 0.27
CAPN1-228ENST00000534373 PRMT6Q96LA8 375 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-228ENST00000534373 UNCXA6NJT0 531 aa16.74■□□□□ 0.27
CAPN1-228ENST00000534373 IPO8O15397 1037 aaKnown RBP16.74■□□□□ 0.27
CAPN1-228ENST00000534373 CAPN15O75808 1086 aa16.74■□□□□ 0.27
CAPN1-228ENST00000534373 FGFR2P21802 821 aa16.74■□□□□ 0.27
CAPN1-228ENST00000534373 HDLBPQ00341 1268 aaKnown RBP16.74■□□□□ 0.27
CAPN1-228ENST00000534373 MRIQ9BWK5 157 aa16.74■□□□□ 0.27
CAPN1-228ENST00000534373 TSKSQ9UJT2 592 aa16.74■□□□□ 0.27
CAPN1-228ENST00000534373 TTF2Q9UNY4 1162 aaKnown RBP16.74■□□□□ 0.27
CAPN1-228ENST00000534373 FRAT2O75474 233 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-228ENST00000534373 CIAO1O76071 339 aa16.73■□□□□ 0.27
CAPN1-228ENST00000534373 RBM5P52756 815 aaKnown RBP eCLIP16.73■□□□□ 0.27
CAPN1-228ENST00000534373 MAP3K11Q16584 847 aa16.73■□□□□ 0.27
CAPN1-228ENST00000534373 SUPT20HL1Q3ZLR7 823 aa16.73■□□□□ 0.27
CAPN1-228ENST00000534373 INTS3Q68E01 1043 aaKnown RBP16.73■□□□□ 0.27
CAPN1-228ENST00000534373 MOB2Q70IA6 237 aa16.73■□□□□ 0.27
CAPN1-228ENST00000534373 LPIN2Q92539 896 aa16.73■□□□□ 0.27
CAPN1-228ENST00000534373 RNF186Q9NXI6 227 aa16.73■□□□□ 0.27
CAPN1-228ENST00000534373 JAG2Q9Y219 1238 aa16.73■□□□□ 0.27
CAPN1-228ENST00000534373 SUGT1Q9Y2Z0 365 aa16.73■□□□□ 0.27
CAPN1-228ENST00000534373 PPP1R12BO60237 982 aaPredicted RBP16.72■□□□□ 0.27
CAPN1-228ENST00000534373 TNFAIP1Q13829 316 aa16.72■□□□□ 0.27
CAPN1-228ENST00000534373 LDLRAD1Q5T700 205 aa16.72■□□□□ 0.27
CAPN1-228ENST00000534373 GNAI3P08754 354 aa16.71■□□□□ 0.27
CAPN1-228ENST00000534373 SLC5A1P13866 664 aa16.71■□□□□ 0.27
CAPN1-228ENST00000534373 BCAMP50895 628 aa16.71■□□□□ 0.27
CAPN1-228ENST00000534373 DIEXFQ68CQ4 756 aaKnown RBP16.71■□□□□ 0.27
CAPN1-228ENST00000534373 ATG9AQ7Z3C6 839 aa16.71■□□□□ 0.27
CAPN1-228ENST00000534373 PCDHAC2Q9Y5I4 1007 aa16.71■□□□□ 0.27
CAPN1-228ENST00000534373 CLRN2A0PK11 232 aa16.7■□□□□ 0.26
CAPN1-228ENST00000534373 TRPA1O75762 1119 aa16.7■□□□□ 0.26
CAPN1-228ENST00000534373 IL15P40933 162 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-228ENST00000534373 CRKP46108 304 aa16.7■□□□□ 0.26
CAPN1-228ENST00000534373 TM4SF4P48230 202 aa16.7■□□□□ 0.26
CAPN1-228ENST00000534373 SPDYE2Q495Y8 402 aa16.7■□□□□ 0.26
CAPN1-228ENST00000534373 DZIP1LQ8IYY4 767 aaKnown RBP16.7■□□□□ 0.26
CAPN1-228ENST00000534373 ABHD8Q96I13 439 aa16.7■□□□□ 0.26
CAPN1-228ENST00000534373 VEZTQ9HBM0 779 aa16.7■□□□□ 0.26
CAPN1-228ENST00000534373 CEP126Q9P2H0 1117 aa16.7■□□□□ 0.26
CAPN1-228ENST00000534373 ANGEL1Q9UNK9 670 aaKnown RBP16.7■□□□□ 0.26
CAPN1-228ENST00000534373 LRRFIP2Q9Y608 721 aaKnown RBP16.7■□□□□ 0.26
CAPN1-228ENST00000534373 ECM29Q5VYK3 1845 aa16.7■□□□□ 0.26
CAPN1-228ENST00000534373 ZBTB22O15209 634 aa16.69■□□□□ 0.26
CAPN1-228ENST00000534373 CHAF1AQ13111 956 aaPredicted RBP16.69■□□□□ 0.26
CAPN1-228ENST00000534373 RASA3Q14644 834 aa16.69■□□□□ 0.26
CAPN1-228ENST00000534373 MIER1Q8N108 512 aa16.69■□□□□ 0.26
CAPN1-228ENST00000534373 MEIS3Q99687 375 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms