RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 ITGA6P23229 1130 aa11.87□□□□□ -0.51
PACS1-214ENST00000533811 RBM5P52756 815 aaKnown RBP eCLIP11.87□□□□□ -0.51
PACS1-214ENST00000533811 SP3Q02447 781 aa11.87□□□□□ -0.51
PACS1-214ENST00000533811 SUPT20HL1Q3ZLR7 823 aa11.87□□□□□ -0.51
PACS1-214ENST00000533811 NBPF12Q5TAG4 269 aaPredicted RBP11.87□□□□□ -0.51
PACS1-214ENST00000533811 KSR2Q6VAB6 950 aa11.87□□□□□ -0.51
PACS1-214ENST00000533811 CD209Q9NNX6 404 aa11.87□□□□□ -0.51
PACS1-214ENST00000533811 JAG2Q9Y219 1238 aa11.87□□□□□ -0.51
PACS1-214ENST00000533811 HTTP42858 3142 aa11.86□□□□□ -0.51
PACS1-214ENST00000533811 NEURL1BA8MQ27 555 aa11.86□□□□□ -0.51
PACS1-214ENST00000533811 SNAP23O00161 211 aa11.86□□□□□ -0.51
PACS1-214ENST00000533811 APAF1O14727 1248 aa11.86□□□□□ -0.51
PACS1-214ENST00000533811 GJA5P36382 358 aa11.86□□□□□ -0.51
PACS1-214ENST00000533811 FXR1P51114 621 aaKnown RBP eCLIP11.86□□□□□ -0.51
PACS1-214ENST00000533811 CALD1Q05682 793 aaKnown RBP11.86□□□□□ -0.51
PACS1-214ENST00000533811 CHRNDQ07001 517 aa11.86□□□□□ -0.51
PACS1-214ENST00000533811 MAP3K11Q16584 847 aa11.86□□□□□ -0.51
PACS1-214ENST00000533811 CFAP100Q494V2 611 aa11.86□□□□□ -0.51
PACS1-214ENST00000533811 CERS5Q8N5B7 392 aa11.86□□□□□ -0.51
PACS1-214ENST00000533811 ARMC5Q96C12 935 aa11.86□□□□□ -0.51
PACS1-214ENST00000533811 ELP3Q9H9T3 547 aa11.86□□□□□ -0.51
PACS1-214ENST00000533811 PPP2R3BQ9Y5P8 575 aa11.86□□□□□ -0.51
PACS1-214ENST00000533811 CENPFP49454 3210 aa11.86□□□□□ -0.51
PACS1-214ENST00000533811 TAF5LO75529 589 aa11.85□□□□□ -0.51
PACS1-214ENST00000533811 SLC4A8Q2Y0W8 1093 aa11.85□□□□□ -0.51
PACS1-214ENST00000533811 SLC9C1Q4G0N8 1177 aa11.85□□□□□ -0.51
PACS1-214ENST00000533811 HELBQ8NG08 1087 aaPredicted RBP11.85□□□□□ -0.51
PACS1-214ENST00000533811 STK31Q9BXU1 1019 aa11.85□□□□□ -0.51
PACS1-214ENST00000533811 CHMP4AQ9BY43 222 aa11.85□□□□□ -0.51
PACS1-214ENST00000533811 AOX1Q06278 1338 aa11.85□□□□□ -0.51
PACS1-214ENST00000533811 A0A1B0GUL6 1792 aa11.84□□□□□ -0.51
PACS1-214ENST00000533811 SPDYE2BA6NHP3 402 aa11.84□□□□□ -0.51
PACS1-214ENST00000533811 USP2O75604 605 aaPredicted RBP11.84□□□□□ -0.51
PACS1-214ENST00000533811 SPDYE6P0CI01 402 aa11.84□□□□□ -0.51
PACS1-214ENST00000533811 CAP1Q01518 475 aa11.84□□□□□ -0.51
PACS1-214ENST00000533811 DDX10Q13206 875 aaKnown RBP11.84□□□□□ -0.51
PACS1-214ENST00000533811 RASA3Q14644 834 aa11.84□□□□□ -0.51
PACS1-214ENST00000533811 ANKRD13AQ8IZ07 590 aa11.84□□□□□ -0.51
PACS1-214ENST00000533811 TSPYL6Q8N831 410 aa11.84□□□□□ -0.51
PACS1-214ENST00000533811 MTMR14Q8NCE2 650 aa11.84□□□□□ -0.51
PACS1-214ENST00000533811 OPTNQ96CV9 577 aa11.84□□□□□ -0.51
PACS1-214ENST00000533811 PRMT6Q96LA8 375 aaPredicted RBP11.84□□□□□ -0.51
PACS1-214ENST00000533811 PTPN18Q99952 460 aa11.84□□□□□ -0.51
PACS1-214ENST00000533811 CHMP3Q9Y3E7 222 aa11.84□□□□□ -0.51
PACS1-214ENST00000533811 PTCH2Q9Y6C5 1203 aa11.84□□□□□ -0.51
PACS1-214ENST00000533811 TRIOBPQ9H2D6 2365 aa11.83□□□□□ -0.52
PACS1-214ENST00000533811 H7C1W4 665 aa11.83□□□□□ -0.52
PACS1-214ENST00000533811 TAF1CQ15572 869 aaPredicted RBP11.83□□□□□ -0.52
PACS1-214ENST00000533811 ZNF804AQ7Z570 1209 aa11.83□□□□□ -0.52
PACS1-214ENST00000533811 NBPF11Q86T75 865 aa11.83□□□□□ -0.52
PACS1-214ENST00000533811 ZNF333Q96JL9 665 aa11.83□□□□□ -0.52
PACS1-214ENST00000533811 COLQQ9Y215 455 aaPredicted RBP11.83□□□□□ -0.52
PACS1-214ENST00000533811 CEP290O15078 2479 aa11.83□□□□□ -0.52
PACS1-214ENST00000533811 ZSWIM8A7E2V4 1837 aa11.83□□□□□ -0.52
PACS1-214ENST00000533811 CCL15-CCL14A0A0B4J2E2 113 aa11.82□□□□□ -0.52
PACS1-214ENST00000533811 ANKRD18BA2A2Z9 1011 aa11.82□□□□□ -0.52
PACS1-214ENST00000533811 PLIN1O60240 522 aa11.82□□□□□ -0.52
PACS1-214ENST00000533811 ECM2O94769 699 aaPredicted RBP11.82□□□□□ -0.52
PACS1-214ENST00000533811 ARHGEF6Q15052 776 aa11.82□□□□□ -0.52
PACS1-214ENST00000533811 CCL15Q16663 113 aa11.82□□□□□ -0.52
PACS1-214ENST00000533811 G2E3Q7L622 706 aa11.82□□□□□ -0.52
PACS1-214ENST00000533811 CNKSR2Q8WXI2 1034 aa11.82□□□□□ -0.52
PACS1-214ENST00000533811 TSR2Q969E8 191 aaKnown RBP11.82□□□□□ -0.52
PACS1-214ENST00000533811 MYH16Q9H6N6 1097 aa11.82□□□□□ -0.52
PACS1-214ENST00000533811 ZFYVE28Q9HCC9 887 aa11.82□□□□□ -0.52
PACS1-214ENST00000533811 BRCA2P51587 3418 aa11.81□□□□□ -0.52
PACS1-214ENST00000533811 UNCXA6NJT0 531 aa11.81□□□□□ -0.52
PACS1-214ENST00000533811 TNFAIP1Q13829 316 aa11.81□□□□□ -0.52
PACS1-214ENST00000533811 GCKRQ14397 625 aa11.81□□□□□ -0.52
PACS1-214ENST00000533811 PIAS4Q8N2W9 510 aaPredicted RBP11.81□□□□□ -0.52
PACS1-214ENST00000533811 BRI3BPQ8WY22 251 aa11.81□□□□□ -0.52
PACS1-214ENST00000533811 PLA2G12BQ9BX93 195 aa11.81□□□□□ -0.52
PACS1-214ENST00000533811 TESPA1A2RU30 521 aaPredicted RBP11.8□□□□□ -0.52
PACS1-214ENST00000533811 TCP10L2B9ZVM9 353 aa11.8□□□□□ -0.52
PACS1-214ENST00000533811 H0YGN5 161 aa11.8□□□□□ -0.52
PACS1-214ENST00000533811 SLC4A2P04920 1241 aa11.8□□□□□ -0.52
PACS1-214ENST00000533811 IFIT5Q13325 482 aaKnown RBP11.8□□□□□ -0.52
PACS1-214ENST00000533811 TAF7LQ5H9L4 462 aa11.8□□□□□ -0.52
PACS1-214ENST00000533811 SH3TC2Q8TF17 1288 aa11.8□□□□□ -0.52
PACS1-214ENST00000533811 TDRD3Q9H7E2 651 aaKnown RBP11.8□□□□□ -0.52
PACS1-214ENST00000533811 ZNF70Q9UC06 446 aaPredicted RBP11.8□□□□□ -0.52
PACS1-214ENST00000533811 CSADQ9Y600 493 aa11.8□□□□□ -0.52
PACS1-214ENST00000533811 WDHD1O75717 1129 aaPredicted RBP11.79□□□□□ -0.52
PACS1-214ENST00000533811 CSF1RP07333 972 aa11.79□□□□□ -0.52
PACS1-214ENST00000533811 IL1R1P14778 569 aa11.79□□□□□ -0.52
PACS1-214ENST00000533811 GTF2A2P52657 109 aa11.79□□□□□ -0.52
PACS1-214ENST00000533811 CASP7P55210 303 aa11.79□□□□□ -0.52
PACS1-214ENST00000533811 FKBP5Q13451 457 aaPredicted RBP11.79□□□□□ -0.52
PACS1-214ENST00000533811 KIF22Q14807 665 aa11.79□□□□□ -0.52
PACS1-214ENST00000533811 SPDYE2Q495Y8 402 aa11.79□□□□□ -0.52
PACS1-214ENST00000533811 CDAN1Q8IWY9 1227 aa11.79□□□□□ -0.52
PACS1-214ENST00000533811 FAM43AQ8N2R8 423 aa11.79□□□□□ -0.52
PACS1-214ENST00000533811 DNAAF4Q8WXU2 420 aa11.79□□□□□ -0.52
PACS1-214ENST00000533811 OTUD5Q96G74 571 aa11.79□□□□□ -0.52
PACS1-214ENST00000533811 MS4A4AQ96JQ5 239 aa11.79□□□□□ -0.52
PACS1-214ENST00000533811 TTF2Q9UNY4 1162 aaKnown RBP11.79□□□□□ -0.52
PACS1-214ENST00000533811 ARAP2Q8WZ64 1704 aa11.79□□□□□ -0.52
PACS1-214ENST00000533811 IRS2Q9Y4H2 1338 aa11.79□□□□□ -0.52
PACS1-214ENST00000533811 FKBP1AP62942 108 aaKnown RBP11.78□□□□□ -0.52
PACS1-214ENST00000533811 MAP3K9P80192 1104 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms