RNA–Protein interactions for RNA: ENST00000533674.1

BEST3-207, Transcript of bestrophin 3, humanhuman

TSL 3

Gene BEST3, Length 670 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-207ENST00000533674 TTLL12Q14166 644 aaPredicted RBP11.67□□□□□ -0.54
BEST3-207ENST00000533674 DUSP27Q5VZP5 1158 aa11.67□□□□□ -0.54
BEST3-207ENST00000533674 ZNF687Q8N1G0 1237 aa11.67□□□□□ -0.54
BEST3-207ENST00000533674 AGBL3Q8NEM8 1001 aa11.67□□□□□ -0.54
BEST3-207ENST00000533674 CCDC85AQ96PX6 553 aaPredicted RBP11.67□□□□□ -0.54
BEST3-207ENST00000533674 HDAC9Q9UKV0 1011 aa11.67□□□□□ -0.54
BEST3-207ENST00000533674 MYBBP1AQ9BQG0 1328 aaKnown RBP11.66□□□□□ -0.54
BEST3-207ENST00000533674 TBC1D12O60347 775 aa11.66□□□□□ -0.54
BEST3-207ENST00000533674 RSBN1LQ6PCB5 846 aaPredicted RBP11.66□□□□□ -0.54
BEST3-207ENST00000533674 CTU1Q7Z7A3 348 aaKnown RBP11.66□□□□□ -0.54
BEST3-207ENST00000533674 ANKRD18AQ8IVF6 992 aa11.66□□□□□ -0.54
BEST3-207ENST00000533674 ZBTB38Q8NAP3 1195 aaPredicted RBP11.66□□□□□ -0.54
BEST3-207ENST00000533674 OXER1Q8TDS5 423 aa11.66□□□□□ -0.54
BEST3-207ENST00000533674 FBXW7Q969H0 707 aa11.66□□□□□ -0.54
BEST3-207ENST00000533674 CSRNP1Q96S65 589 aa11.66□□□□□ -0.54
BEST3-207ENST00000533674 MYD88Q99836 296 aa11.66□□□□□ -0.54
BEST3-207ENST00000533674 SEC31BQ9NQW1 1179 aa11.66□□□□□ -0.54
BEST3-207ENST00000533674 PODXL2Q9NZ53 605 aa11.66□□□□□ -0.54
BEST3-207ENST00000533674 LHX6Q9UPM6 363 aa11.66□□□□□ -0.54
BEST3-207ENST00000533674 POLR2AP24928 1970 aaKnown RBP11.66□□□□□ -0.54
BEST3-207ENST00000533674 COL4A1P02462 1669 aa11.65□□□□□ -0.54
BEST3-207ENST00000533674 ASTN2O75129 1339 aaPredicted RBP11.65□□□□□ -0.54
BEST3-207ENST00000533674 XDHP47989 1333 aa11.65□□□□□ -0.54
BEST3-207ENST00000533674 USP17L8P0C7I0 530 aa11.65□□□□□ -0.54
BEST3-207ENST00000533674 NF2P35240 595 aa11.65□□□□□ -0.54
BEST3-207ENST00000533674 FKBP1BP68106 108 aa11.65□□□□□ -0.54
BEST3-207ENST00000533674 RASAL3Q86YV0 1011 aa11.65□□□□□ -0.54
BEST3-207ENST00000533674 MYOZ2Q9NPC6 264 aa11.65□□□□□ -0.54
BEST3-207ENST00000533674 PAPPA2Q9BXP8 1791 aa11.64□□□□□ -0.55
BEST3-207ENST00000533674 USP17L3A6NCW0 530 aa11.64□□□□□ -0.55
BEST3-207ENST00000533674 USP17L4A6NCW7 530 aa11.64□□□□□ -0.55
BEST3-207ENST00000533674 PDE8AO60658 829 aa11.64□□□□□ -0.55
BEST3-207ENST00000533674 DDX58O95786 925 aaKnown RBP11.64□□□□□ -0.55
BEST3-207ENST00000533674 TRIM28Q13263 835 aaKnown RBP11.64□□□□□ -0.55
BEST3-207ENST00000533674 USP17L1Q7RTZ2 530 aa11.64□□□□□ -0.55
BEST3-207ENST00000533674 OGFOD1Q8N543 542 aa11.64□□□□□ -0.55
BEST3-207ENST00000533674 MBIPQ9NS73 344 aa11.64□□□□□ -0.55
BEST3-207ENST00000533674 CWC25Q9NXE8 425 aaPredicted RBP11.64□□□□□ -0.55
BEST3-207ENST00000533674 PITPNM2Q9BZ72 1349 aa11.63□□□□□ -0.55
BEST3-207ENST00000533674 SCN9AQ15858 1988 aa11.63□□□□□ -0.55
BEST3-207ENST00000533674 ELL2O00472 640 aaPredicted RBP11.63□□□□□ -0.55
BEST3-207ENST00000533674 PCCAP05165 728 aaPredicted RBP11.63□□□□□ -0.55
BEST3-207ENST00000533674 ATP2B4P23634 1241 aa11.63□□□□□ -0.55
BEST3-207ENST00000533674 ZNF280AP59817 542 aaPredicted RBP11.63□□□□□ -0.55
BEST3-207ENST00000533674 CALD1Q05682 793 aaKnown RBP11.63□□□□□ -0.55
BEST3-207ENST00000533674 PODNQ7Z5L7 613 aa11.63□□□□□ -0.55
BEST3-207ENST00000533674 CCDC191Q8NCU4 936 aa11.63□□□□□ -0.55
BEST3-207ENST00000533674 CDC5LQ99459 802 aaKnown RBP11.63□□□□□ -0.55
BEST3-207ENST00000533674 CHMP4AQ9BY43 222 aa11.63□□□□□ -0.55
BEST3-207ENST00000533674 PHAXQ9H814 394 aaKnown RBP11.63□□□□□ -0.55
BEST3-207ENST00000533674 GNAI1P63096 354 aa11.62□□□□□ -0.55
BEST3-207ENST00000533674 PKN2Q16513 984 aaKnown RBP11.62□□□□□ -0.55
BEST3-207ENST00000533674 JARID2Q92833 1246 aaPredicted RBP11.62□□□□□ -0.55
BEST3-207ENST00000533674 SCAF8Q9UPN6 1271 aaKnown RBP11.62□□□□□ -0.55
BEST3-207ENST00000533674 PSME4Q14997 1843 aa11.62□□□□□ -0.55
BEST3-207ENST00000533674 ZNF609O15014 1411 aa11.61□□□□□ -0.55
BEST3-207ENST00000533674 SPEF2Q9C093 1822 aa11.61□□□□□ -0.55
BEST3-207ENST00000533674 UBE2Q2LH0YL09 131 aa11.61□□□□□ -0.55
BEST3-207ENST00000533674 TBC1D8O95759 1140 aa11.61□□□□□ -0.55
BEST3-207ENST00000533674 SPNS2Q8IVW8 549 aa11.61□□□□□ -0.55
BEST3-207ENST00000533674 ADAMTS8Q9UP79 889 aa11.61□□□□□ -0.55
BEST3-207ENST00000533674 HPS5Q9UPZ3 1129 aa11.61□□□□□ -0.55
BEST3-207ENST00000533674 MYO3BQ8WXR4 1341 aa11.6□□□□□ -0.55
BEST3-207ENST00000533674 CTSWP56202 376 aa11.6□□□□□ -0.55
BEST3-207ENST00000533674 NEXNQ0ZGT2 675 aa11.6□□□□□ -0.55
BEST3-207ENST00000533674 SREBF2Q12772 1141 aa11.6□□□□□ -0.55
BEST3-207ENST00000533674 CCDC30Q5VVM6 783 aa11.6□□□□□ -0.55
BEST3-207ENST00000533674 PRAMEF18Q5VWM3 479 aa11.6□□□□□ -0.55
BEST3-207ENST00000533674 MOB2Q70IA6 237 aa11.6□□□□□ -0.55
BEST3-207ENST00000533674 ZNF296Q8WUU4 475 aaPredicted RBP11.6□□□□□ -0.55
BEST3-207ENST00000533674 METTL22Q9BUU2 404 aaPredicted RBP11.6□□□□□ -0.55
BEST3-207ENST00000533674 IFT57Q9NWB7 429 aa11.6□□□□□ -0.55
BEST3-207ENST00000533674 MED23Q9ULK4 1368 aa11.59□□□□□ -0.55
BEST3-207ENST00000533674 DDX10Q13206 875 aaKnown RBP11.59□□□□□ -0.55
BEST3-207ENST00000533674 PRKG1Q13976 671 aa11.59□□□□□ -0.55
BEST3-207ENST00000533674 NBPF9Q3BBW0 867 aa11.59□□□□□ -0.55
BEST3-207ENST00000533674 PRPF38BQ5VTL8 546 aaKnown RBP11.59□□□□□ -0.55
BEST3-207ENST00000533674 ARMC9Q7Z3E5 817 aa11.59□□□□□ -0.55
BEST3-207ENST00000533674 MAP3K2Q9Y2U5 619 aa11.59□□□□□ -0.55
BEST3-207ENST00000533674 TNRC18O15417 2968 aaPredicted RBP11.58□□□□□ -0.56
BEST3-207ENST00000533674 IGHMBP2P38935 993 aaKnown RBP11.58□□□□□ -0.56
BEST3-207ENST00000533674 KCNJ4P48050 445 aa11.58□□□□□ -0.56
BEST3-207ENST00000533674 CCT4P50991 539 aaKnown RBP11.58□□□□□ -0.56
BEST3-207ENST00000533674 GMLQ99445 158 aa11.58□□□□□ -0.56
BEST3-207ENST00000533674 STK31Q9BXU1 1019 aa11.58□□□□□ -0.56
BEST3-207ENST00000533674 COA1Q9GZY4 146 aa11.58□□□□□ -0.56
BEST3-207ENST00000533674 BSDC1Q9NW68 430 aaPredicted RBP11.58□□□□□ -0.56
BEST3-207ENST00000533674 MYH3P11055 1940 aa11.57□□□□□ -0.56
BEST3-207ENST00000533674 GPR25O00155 361 aa11.57□□□□□ -0.56
BEST3-207ENST00000533674 WNT10BO00744 389 aa11.57□□□□□ -0.56
BEST3-207ENST00000533674 SASH1O94885 1247 aa11.57□□□□□ -0.56
BEST3-207ENST00000533674 STRIP1Q5VSL9 837 aa11.57□□□□□ -0.56
BEST3-207ENST00000533674 APOBEC3FQ8IUX4 373 aaKnown RBP11.57□□□□□ -0.56
BEST3-207ENST00000533674 MXD3Q9BW11 206 aa11.57□□□□□ -0.56
BEST3-207ENST00000533674 GREM2Q9H772 168 aa11.57□□□□□ -0.56
BEST3-207ENST00000533674 MINPP1Q9UNW1 487 aa11.57□□□□□ -0.56
BEST3-207ENST00000533674 APAF1O14727 1248 aa11.56□□□□□ -0.56
BEST3-207ENST00000533674 FKTNO75072 461 aa11.56□□□□□ -0.56
BEST3-207ENST00000533674 DACT2Q5SW24 774 aa11.56□□□□□ -0.56
BEST3-207ENST00000533674 TTLL5Q6EMB2 1281 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms